ID   AB262734; SV 1; linear; genomic DNA; STD; PRO; 1556 BP.
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AC   AB262734;
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DT   28-NOV-2006 (Rel. 89, Created)
DT   14-APR-2007 (Rel. 91, Last updated, Version 2)
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DE   Lactobacillus parafarraginis gene for 16S rRNA, partial sequence, strain:
DE   NRIC 0677.
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KW   .
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OS   Lactobacillus parafarraginis
OC   Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Lactobacillus.
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RN   [1]
RP   1-1556
RA   Endo A., Okada S.;
RT   ;
RL   Submitted (15-JUN-2006) to the INSDC.
RL   Akihito Endo, Tokyo University of Agriculture, NODAI Culture Collection
RL   Center; 1-1-1 Sakuragaoka, Setagaya, Tokyo 156-8502, Japan
RL   (E-mail:a3endou@nodai.ac.jp, Tel:81-3-5477-2549)
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RN   [2]
RX   DOI; 10.1099/ijs.0.64618-0.
RX   PUBMED; 17392191.
RA   Endo A., Okada S.;
RT   "Lactobacillus farraginis sp. nov. and Lactobacillus parafarraginis sp.
RT   nov., heterofermentative lactobacilli isolated from a compost of distilled
RT   shochu residue";
RL   Int. J. Syst. Evol. Microbiol. 57(Pt 4):708-712(2007).
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DR   MD5; 594262f46a16cc29303b17d8a251be94.
DR   RFAM; RF00177; SSU_rRNA_bacteria.
DR   RFAM; RF01959; SSU_rRNA_archaea.
DR   SILVA-SSU; AB262734.
DR   StrainInfo; 701624; 1.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1556
FT                   /organism="Lactobacillus parafarraginis"
FT                   /strain="NRIC 0677"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="composting distilled shochu residue"
FT                   /note="type strain of Lactobacillus parafarraginis"
FT                   /db_xref="taxon:390842"
FT   rRNA            <1..>1556
FT                   /product="16S rRNA"
XX
SQ   Sequence 1556 BP; 395 A; 349 C; 468 G; 344 T; 0 other;
     acatggctca ggacgaacgc tggcggcgtg cctaatacat gcaagtcgaa cgcgtcttgg        60
     ttaatgatgt taggtgcttg catttaactg atttaacatt gagacgagtg gcgaactggt       120
     gagtaacacg tgggtaacct gccctgaagt gggggataac acttggaaac aggtgctaat       180
     accgcataac aacgaaaacc acatggtttt cgtttgaaag atggcttcgg ctgtcacttt       240
     tggatggacc cgcggcgtat tagcttgttg gtgaggtaac ggctcaccaa ggccatgata       300
     cgtagccgac ctgagagggt aatcggccac attgggactg agacacggcc caaactccta       360
     cgggaggcag cagtagggaa tcttccacaa tggacgaaag tctgatggag caacgccgcg       420
     tgagtgatga agggtttcgg ctcgtaaaac tctgttgttg gagaagaaca ggtgatagag       480
     taactgttat catcttgacg gtatccaacc agaaagccac ggctaactac gtgccagcag       540
     ccgcggtaat acgtaggtgg caagcgttgt ccggatttat tgggcgtaaa gcgagcgcag       600
     gcggtttttt aggtctgatg tgaaagcctt cggcttaacc ggagaagggc atcggaaacc       660
     gggagacttg agtgcagaag aggacagtgg aactccatgt gtagcggtga aatgcgtaga       720
     tatatggaag aacaccagtg gcgaaggcgg ctgtctggtc tgtaactgac gctgaggctc       780
     gaaagcatgg gtagcgaaca ggattagata ccctggtagt ccatgccgta aacgatgagt       840
     gctaagtgtt ggagggtttc cgcccttcag tgctgcagct aacgcattaa gcactccgcc       900
     tggggagtac gaccgcaagg ttgaaactca aaggaattga cgggggcccg cacaagcggt       960
     ggagcatgtg gtttaattcg atgctacgcg aagaacctta ccaggtcttg acatcttctg      1020
     ctaacctaag agattaggcg ttcccttcgg ggacggaatg acaggtggtg catggttgtc      1080
     gtcagctcgt gtcgtgagat gttgggttaa gtcccgcaac gagcgcaacc cttattgtca      1140
     gttgccagca tttagttggg cactctggcg agactgccgg tgacaaaccg gaggaaggtg      1200
     gggatgacgt caaatcatca tgccccttat gacctgggct acacacgtgc tacaatggac      1260
     ggtacaacga gtcgcgaaac cgcgaggtca agctaatctc ttaaagccgt tctcagttcg      1320
     gattgcaggc tgcaactcgc ctgcatgaag ttggaatcgc tagtaatcgt ggatcagcat      1380
     gccacggtga atacgttccc gggccttgta cacaccgccc gtcacaccat gagagtttgt      1440
     aacacccaaa gccggtgagg taaccttcgg gaaccagccg tctaaggtgg gacagatgat      1500
     tagggtgaag tcgtaacaag gtagccgtag gagaacctgc ggttggatca cctcct          1556
//