Downloading taxonomy data

Taxonomy information is available through the ENA Browser using REST URLs. Download of taxonomy data is also supported through FTP.

The taxonomy data formats, including detailed information about Darwin Core, are described here.

Downloading taxonomy data via FTP

Taxonomy data is available for bulk download through FTP at ftp://ftp.ebi.ac.uk/pub/databases/ena/taxonomy/.

File Definition
taxonomy.xml.gz Full release of the taxonomy data in ENA taxonomy format.
sdwca Full release of taxonomy data in Darwin Core Archive format.

Latest ENA news

11 Oct 2017: Read data download issues resolved

Read data download issues previously affecting ftp.sra.ebi.ac.uk and fasp.sra.ebi.ac.uk services now resolved.

06 Oct 2017: ENA read data download issues

Issues with read data download from ftp.sra.ebi.ac.uk and fasp.sra.ebi.ac.uk

04 Oct 2017: ENA Release 133

Release 133 of ENA's assembled/annotated sequences now available