{"EMPIAR-13952":{"imagesets":[{"segmentations":[],"name":"Human Placenta Dataset; WINSdata 256cube ROI Image alongside paired Villi and Vessel data, and 700cube unlabelled image data","directory":"data","category":"reconstructed volumes","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":4,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED BYTE","pixel_width":null,"pixel_height":null,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Four files; all taken from much larger scan volume for the purposes of a tutorial demonstration. Three 256cube files contain one image and two label files that overlap; Villi corresponds to the villous tree network and Vessels corresponds to the nested blood vessels network. These data are to be used as training data for volume semantic segmentation, and the 700cube to be used as a prediction volume (testing relative models from 256cube data).","image_width":null,"image_height":null}],"workflow_file":null,"grant_references":[{"funding_body":"Wellcome Trust","code":"212980/Z/18/Z","country":"United Kingdom"},{"funding_body":"Medical Research Council (MRC, United Kingdom)","code":"MR/N011538/1","country":"United Kingdom"},{"funding_body":"Engineering and Physical Sciences Research Council","code":"EP/T008725/1","country":"United Kingdom"}],"version_history":[],"title":"WINSdata ROI crops of synchrotron micro-CT applied to the human placenta; EMBO Course 2026 - Volume-Segmantics Training Dataset","principal_investigator":[{"author_orcid":"0009-0009-4645-7747","middle_name":null,"organization":"Rosalind Franklin Institute","street":null,"town_or_city":"Harwell","state_or_province":null,"post_or_zip":"OX11 0QX","telephone":null,"fax":null,"first_name":"Michele","last_name":"Darrow","email":"michele.darrow [at] rfi.ac.uk","country":"United Kingdom","entry":"EMPIAR-13952"}],"status":"REL","deposition_date":"2026-09-15","release_date":"2026-09-18","obsolete_date":null,"update_date":"2026-09-18","corresponding_author":{"author":{"author_orcid":"0009-0009-4645-7747","middle_name":null,"organization":"Rosalind Franklin Institute","street":null,"town_or_city":"Harwell","state_or_province":null,"post_or_zip":"OX11 0QX","first_name":"Sam","last_name":"Kersley","country":"United Kingdom"}},"authors":[{"author":{"name":"Tun W. M","author_orcid":"0000-0003-0991-8785"}},{"author":{"name":"Poologasundarampillai G","author_orcid":"0000-0002-8498-323X"}},{"author":{"name":"Bischof H","author_orcid":null}},{"author":{"name":"Nye G","author_orcid":null}},{"author":{"name":"King O. N. F","author_orcid":"0000-0002-6152-7207"}},{"author":{"name":"Basham M","author_orcid":"0000-0002-8438-1415"}},{"author":{"name":"Tokudome Y","author_orcid":null}},{"author":{"name":"Lewis R. M","author_orcid":"0000-0003-4044-9104"}},{"author":{"name":"Johnstone E. D","author_orcid":null}},{"author":{"name":"Brownbill P","author_orcid":"0000-0002-8328-7072"}},{"author":{"name":"Darrow M","author_orcid":"0000-0001-6259-1684"}},{"author":{"name":"Chernyavsky I. L","author_orcid":"0000-0003-0284-9318"}}],"cross_references":[],"biostudies_references":[],"idr_references":[],"empiar_references":[{"name":"EMPIAR-10562"},{"name":"EMPIAR-10563"}],"citation":[{"authors":[{"name":"Tun W. M","author_orcid":"0000-0003-0991-8785"},{"name":"Poologasundarampillai G","author_orcid":"0000-0002-8498-323X"},{"name":"Bischof H","author_orcid":null},{"name":"Nye G","author_orcid":null},{"name":"King O. N. F","author_orcid":"0000-0002-6152-7207"},{"name":"Basham M","author_orcid":"0000-0002-8438-1415"},{"name":"Tokudome Y","author_orcid":null},{"name":"Lewis R. M","author_orcid":"0000-0003-4044-9104"},{"name":"Johnstone E. D","author_orcid":null},{"name":"Brownbill P","author_orcid":"0000-0002-8328-7072"},{"name":"Darrow M","author_orcid":"0000-0001-6259-1684"},{"name":"Chernyavsky I. L","author_orcid":"0000-0003-0284-9318"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"A massively multi-scale approach to characterising tissue architecture by synchrotron micro-CT applied to the human placenta","volume":"179","country":"United Kingdom","first_page":null,"last_page":null,"year":"2021","language":"English","doi":"10.1098/rsif.2021.0140","pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"The Royal Society","journal_abbreviation":"","issue":"18","preprint":false}],"dataset_size":"1.1 GB","experiment_type":"Hard X-ray/X-ray microCT","scale":"tissue","entry_doi":"10.6019/EMPIAR-13952"}}