{"EMPIAR-12951":{"imagesets":[{"segmentations":[],"name":"SBF-SEM data of developing P. berghei ookinetes","directory":"data","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":23,"frames_per_image":194,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED BYTE","pixel_width":100.0,"pixel_height":500.0,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"SIFT aligned SBF-SEM data of developing P. berghei ookinetes. \nThe images were acquired with a lateral pixel size of 10nm and z-depth of 40 or 50nm. \nMorphometric parameters to each cell can be found here: https://github.com/mrheinnecker/ookinete_clustering","image_width":null,"image_height":null}],"workflow_file":null,"grant_references":[{"funding_body":"German Research Foundation (DFG)","code":"240245660 - SFB1129","country":"Germany"}],"version_history":[],"title":"Cellular Hallmarks from Volume Electron Microscopy reveals Developmental Progression of Plasmodium Ookinetes","principal_investigator":[{"author_orcid":"0000-0001-8027-1836","middle_name":null,"organization":"European Molecular Biology Laboratory, Cell Biology and Biophysics Unit","street":"Meyerhofstraße 1","town_or_city":"Heidelberg","state_or_province":"Baden Württemberg","post_or_zip":"69117","telephone":null,"fax":null,"first_name":"Yannick","last_name":"Schwab","email":"schwab [at] embl.de","country":"Germany","entry":"EMPIAR-12951"},{"author_orcid":"0000-0002-8332-6668","middle_name":null,"organization":"Parasitology, Center for Infectious Diseases, Heidelberg University Medical Faculty","street":null,"town_or_city":"Heidelberg","state_or_province":null,"post_or_zip":"69120","telephone":null,"fax":null,"first_name":"Freddy","last_name":"Frischknecht","email":"freddy.frischknecht [at] med.uni-heidelberg.de","country":"Germany","entry":"EMPIAR-12951"}],"status":"REL","deposition_date":"2025-03-20","release_date":"2026-01-26","obsolete_date":null,"update_date":"2026-01-26","corresponding_author":{"author":{"author_orcid":"0000-0001-9254-6454","middle_name":null,"organization":"European Molecular Biology Laboratory, Cell Biology and Biophysics Unit","street":"Meyerhofstraße 1","town_or_city":"Heidelberg","state_or_province":"Baden Württemberg","post_or_zip":"69117","first_name":"Nedal","last_name":"Darif","country":"Germany"}},"authors":[{"author":{"name":"Darif N","author_orcid":"0000-0001-9254-6454"}},{"author":{"name":"Rheinnecker M","author_orcid":"0009-0009-7181-3977"}},{"author":{"name":"Schwab Y","author_orcid":"0000-0001-8027-1836"}},{"author":{"name":"Frischknecht F","author_orcid":"0000-0002-8332-6668"}}],"cross_references":[],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Darif N","author_orcid":"0000-0001-9254-6454"},{"name":"Rheinnecker M","author_orcid":"0009-0009-7181-3977"},{"name":"Hildenbrand K","author_orcid":"0000-0002-9329-9253"},{"name":"Chookajorn T","author_orcid":"0000-0003-2876-6203"},{"name":"Dorner LP","author_orcid":"0000-0002-8120-7155"},{"name":"Hériché JK","author_orcid":"0000-0001-6867-9425"},{"name":"Henriksson S","author_orcid":"0000-0003-1615-0583"},{"name":"Funaya C","author_orcid":"0000-0003-1375-1287"},{"name":"Hentzschel F","author_orcid":"0000-0002-9812-0128"},{"name":"Sandblad F","author_orcid":"0000-0003-3492-3287"},{"name":"Bilker O","author_orcid":"0000-0003-1716-168X"},{"name":"Schwab Y","author_orcid":"0000-0001-8027-1836"},{"name":"Frischknecht F","author_orcid":"0000-0002-8332-6668"}],"editors":[],"published":false,"j_or_nj_citation":true,"title":"Cellular Hallmarks from Volume Electron Microscopy reveals Developmental Progression of Plasmodium Ookinetes","volume":null,"country":"","first_page":null,"last_page":null,"year":"2025","language":"English","doi":null,"pubmedid":null,"details":"SIFT aligned SBF-SEM datasets of Plasmodium berghei ookinetes of different time points","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"","journal_abbreviation":"","issue":null,"preprint":false}],"dataset_size":"3.3 GB","experiment_type":"SBF-SEM","scale":"cell","entry_doi":"10.6019/EMPIAR-12951"}}