{"EMPIAR-12780":{"imagesets":[{"segmentations":[],"name":"Tilt series of S. cerevisiae Not4Δ Nup188::GFP Nup170::mars cells","directory":"data/EMPIAR_Yeast/raw_data","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":40,"frames_per_image":61,"frame_range_min":42,"frame_range_max":61,"voxel_type":"SIGNED 16 BIT INTEGER","pixel_width":2.176,"pixel_height":2.176,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Tilt series were frame-aligned in SerialEM during acquisition, mrc and mdoc files for the stacks are provided. The subfolder \"alignment_files\", contains alignment files (.xf) and tilt files (.tlt) that were generated by AreTomo, CTF estimation from gctf are included as gctf.star files. The cleaned tilt fils lists images excluded from raw stacks.","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Filtered tomograms of S. cerevisiae Not4Δ Nup188::GFP Nup170::mars cells","directory":"data/EMPIAR_Yeast/tomograms","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":40,"frames_per_image":475,"frame_range_min":200,"frame_range_max":475,"voxel_type":"32 BIT FLOAT","pixel_width":8.704,"pixel_height":8.704,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Non-CTF corrected tomograms reconstructed at bin 4 with AreTomo and processed by SIRT-like filtering in IMOD are provided.","image_width":"1016","image_height":"1440"}],"workflow_file":null,"grant_references":[{"funding_body":"Hessian Ministry of Science, Higher Education and Art (HMWK)","code":"EnABLE","country":"Germany"},{"funding_body":"European Research Council (ERC)","code":"724379-Complex Assembly","country":"Germany"},{"funding_body":"European Research Council (ERC)","code":"101054823-NPCvalve","country":"Germany"}],"version_history":[],"title":"Cryo-ET of S. cerevisiae Not4Δ Nup188::GFP Nup170::mars cells","principal_investigator":[{"author_orcid":"0000-0002-7397-1321","middle_name":null,"organization":"Department of Molecular Sociology, Max-Planck-Institute of Biophysics","street":"Max-von-Laue-Straße 3","town_or_city":"Frankfurt","state_or_province":"Hesse","post_or_zip":"60438","telephone":null,"fax":null,"first_name":"Martin","last_name":"Beck","email":"martin.beck [at] biophys.mpg.de","country":"Germany","entry":"EMPIAR-12780"}],"status":"REL","deposition_date":"2025-04-25","release_date":"2025-10-09","obsolete_date":null,"update_date":"2025-10-09","corresponding_author":{"author":{"author_orcid":"0000-0002-4461-750X","middle_name":null,"organization":"Department of Molecular Sociology, Max-Planck-Institute of Biophysics","street":"Max-von-Laue-Straße 3","town_or_city":"Frankfurt","state_or_province":"Hesse","post_or_zip":"60438","first_name":"Jenny","last_name":"Sachweh","country":"Germany"}},"authors":[{"author":{"name":"Sachweh J","author_orcid":"0000-0002-4461-750X"}},{"author":{"name":"Beck M","author_orcid":"0000-0002-7397-1321"}}],"cross_references":["EMD-53725","EMD-53729","EMD-53722","EMD-53721","EMD-53724","EMD-53731","EMD-53727","EMD-53732","EMD-53723","EMD-53728"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Sachweh J","author_orcid":"0000-0002-4461-750X"},{"name":"Börmel M","author_orcid":"0000-0002-4354-891X"},{"name":"Klumpe S","author_orcid":"0000-0002-8350-6503"},{"name":"Becker A","author_orcid":null},{"name":"Taniguchi R","author_orcid":"0000-0003-3862-8349"},{"name":"Kubańska MA","author_orcid":"0000-0003-3835-8238"},{"name":"Pintschovius V","author_orcid":null},{"name":"Kaindl E","author_orcid":null},{"name":"Plitzko JM","author_orcid":"0000-0002-6402-8315"},{"name":"Wilfling F","author_orcid":"0000-0002-6559-7261"},{"name":"Beck M","author_orcid":"0000-0002-7397-1321"},{"name":"Hampoelz B","author_orcid":"0000-0001-7491-0080"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"The small GTPase Ran defines nuclear pore complex asymmetry","volume":null,"country":"","first_page":null,"last_page":null,"year":"2025","language":"English","doi":"10.1016/j.cell.2025.07.025","pubmedid":"40829587","details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Cell","journal_abbreviation":"Cell","issue":null,"preprint":false}],"dataset_size":"176.6 GB","experiment_type":"EMDB","scale":"cell","entry_doi":"10.6019/EMPIAR-12780"}}