{"EMPIAR-12779":{"imagesets":[{"segmentations":[],"name":"Tilt series of D. melanogaster Nup358::VN/Nup358::VC cells","directory":"data/EMPIAR_Fly/raw_data","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":111,"frames_per_image":61,"frame_range_min":42,"frame_range_max":61,"voxel_type":"SIGNED 16 BIT INTEGER","pixel_width":2.414,"pixel_height":2.414,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Tilt series were frame-aligned in SerialEM during acquisition, mrc and mdoc files for the stacks are provided. The subfolder \"alignment_files\", contains alignment files (.xf) and tilt files (.tlt) that were generated by IMOD, CTF estimation from gctf are included as gctf.star files. The cleaned tilt fils lists images excluded from raw stacks.","image_width":"4096","image_height":"4096"},{"segmentations":[],"name":"Filtered tomograms of D. melanogaster Nup358::VN/Nup358::VC cells","directory":"data/EMPIAR_Fly/tomograms","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":111,"frames_per_image":500,"frame_range_min":null,"frame_range_max":null,"voxel_type":"SIGNED 16 BIT INTEGER","pixel_width":9.656,"pixel_height":9.656,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Non-CTF corrected tomograms reconstructed at bin 4 and processed by SIRT-like filtering in IMOD are provided.","image_width":"1024","image_height":"1024"}],"workflow_file":null,"grant_references":[{"funding_body":"Hessian Ministry of Science, Higher Education and Art (HMWK)","code":"EnABLE","country":"Germany"},{"funding_body":"European Research Council (ERC)","code":"724379-Complex Assembly","country":"Germany"},{"funding_body":"European Research Council (ERC)","code":"101054823-NPCvalve","country":"Germany"}],"version_history":[],"title":"Cryo-ET of D. melanogaster Nup358::VN/Nup358::VC cells","principal_investigator":[{"author_orcid":"0000-0002-7397-1321","middle_name":null,"organization":"Department of Molecular Sociology, Max-Planck-Institute of Biophysics","street":"Max-von-Laue-Straße 3","town_or_city":"Frankfurt","state_or_province":"Hesse","post_or_zip":"60438","telephone":null,"fax":null,"first_name":"Martin","last_name":"Beck","email":"martin.beck [at] biophys.mpg.de","country":"Germany","entry":"EMPIAR-12779"}],"status":"REL","deposition_date":"2025-05-14","release_date":"2025-09-04","obsolete_date":null,"update_date":"2025-09-04","corresponding_author":{"author":{"author_orcid":"0000-0002-4461-750X","middle_name":null,"organization":"Department of Molecular Sociology, Max-Planck-Institute of Biophysics","street":"Max-von-Laue-Straße 3","town_or_city":"Frankfurt","state_or_province":"Hesse","post_or_zip":"60438","first_name":"Jenny","last_name":"Sachweh","country":"Germany"}},"authors":[{"author":{"name":"Sachweh J","author_orcid":"0000-0002-4461-750X"}},{"author":{"name":"Beck M","author_orcid":"0000-0002-7397-1321"}}],"cross_references":["EMD-53747","EMD-53746","EMD-53745","EMD-53744","EMD-53751","EMD-53739","EMD-53741","EMD-53742","EMD-53740","EMD-53743"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Sachweh J","author_orcid":"0000-0002-4461-750X"},{"name":"Börmel M","author_orcid":"0000-0002-4354-891X"},{"name":"Klumpe S","author_orcid":"0000-0002-8350-6503"},{"name":"Becker A","author_orcid":null},{"name":"Taniguchi R","author_orcid":"0000-0003-3862-8349"},{"name":"Kubańska MA","author_orcid":"0000-0003-3835-8238"},{"name":"Pintschovius V","author_orcid":null},{"name":"Kaindl E","author_orcid":null},{"name":"Plitzko JM","author_orcid":"0000-0002-6402-8315"},{"name":"Wilfling F","author_orcid":"0000-0002-6559-7261"},{"name":"Beck M","author_orcid":"0000-0002-7397-1321"},{"name":"Hampoelz B","author_orcid":"0000-0001-7491-0080"}],"editors":[],"published":false,"j_or_nj_citation":true,"title":"The small GTPase Ran defines Nuclear Pore Complex Asymmetry","volume":null,"country":"","first_page":null,"last_page":null,"year":null,"language":null,"doi":null,"pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"","journal_abbreviation":"","issue":null,"preprint":true}],"dataset_size":"307.9 GB","experiment_type":"EMDB","scale":"cell","entry_doi":"10.6019/EMPIAR-12779"}}