{"EMPIAR-12706":{"imagesets":[{"segmentations":[],"name":"Aligned and dose-weight averaged micrographs of raiA RNA.","directory":"data/raia_particles","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":8355,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":0.864,"pixel_height":0.864,"micrographs_file_pattern":"data/raia_particles/S6/motioncorrected/*doseweighted.mrc","picked_particles_file_pattern":"","picked_particles_directory":"","details":"The micrographs are the dose-weighted average by patch motion correction in cryosparc.","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Particle images of raiA RNA.","directory":"data/raia_particles","category":"picked particles - single frame - processed","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":318464,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":0.864,"pixel_height":0.864,"micrographs_file_pattern":"","picked_particles_file_pattern":"data/raia_particles/J423_particles_exported.cs","picked_particles_directory":"data/raia_particles/J423","details":"Particle parameters are from the final C1 reconstruction of raiA.","image_width":"320","image_height":"320"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"Single particle cryo-EM micrographs of raiA RNA","principal_investigator":[{"author_orcid":"0000-0002-8910-3078","middle_name":null,"organization":"Division of CryoEM and Bioimaging, SSRL, SLAC National Accelerator Laboratory, Menlo Park, CA USA; Department of Bioengineering and James Clark Center, Stanford University, Stanford, CA USA; Department of Microbiology and Immunology, Stanford Universi","street":null,"town_or_city":"Stanford","state_or_province":"CA","post_or_zip":"94305","telephone":null,"fax":null,"first_name":"Wah","last_name":"Chiu","email":"wahc [at] stanford.edu","country":"United States","entry":"EMPIAR-12706"},{"author_orcid":"0000-0001-7497-0972","middle_name":null,"organization":"Howard Hughes Medical Institute, Stanford University, Stanford, CA USA; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA USA","street":null,"town_or_city":"Stanford","state_or_province":"CA","post_or_zip":"94305","telephone":null,"fax":null,"first_name":"Rhiju","last_name":"Das","email":"rhiju [at] stanford.edu","country":"United States","entry":"EMPIAR-12706"}],"status":"REL","deposition_date":"2024-12-05","release_date":"2025-06-27","obsolete_date":null,"update_date":"2025-06-27","corresponding_author":{"author":{"author_orcid":"0000-0002-6935-518X","middle_name":"Christine","organization":"Biophysics Program, Stanford University","street":null,"town_or_city":"Stanford","state_or_province":"CA","post_or_zip":"94305","first_name":"Rachael","last_name":"Kretsch","country":"United States"}},"authors":[{"author":{"name":"Kretsch RC","author_orcid":"0000-0002-6935-518X"}},{"author":{"name":"Wu Y","author_orcid":"0009-0000-6122-2457"}},{"author":{"name":"Shabalina SA","author_orcid":"0000-0003-2272-7473"}},{"author":{"name":"Lee H","author_orcid":"0009-0006-1911-435X"}},{"author":{"name":"Nye G","author_orcid":"0009-0001-6698-9988"}},{"author":{"name":"Koonin EV","author_orcid":"0000-0003-3943-8299"}},{"author":{"name":"Gao A","author_orcid":"0000-0002-3579-0327"}},{"author":{"name":"Chiu W","author_orcid":"0000-0002-8910-3078"}},{"author":{"name":"Das R","author_orcid":"0000-0001-7497-0972"}}],"cross_references":["EMD-48162"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Kretsch RC","author_orcid":"0000-0002-6935-518X"},{"name":"Wu Y","author_orcid":"0009-0000-6122-2457"},{"name":"Shabalina SA","author_orcid":"0000-0003-2272-7473"},{"name":"Lee H","author_orcid":"0009-0006-1911-435X"},{"name":"Nye G","author_orcid":"0009-0001-6698-9988"},{"name":"Koonin EV","author_orcid":"0000-0003-3943-8299"},{"name":"Gao A","author_orcid":"0000-0002-3579-0327"},{"name":"Chiu W","author_orcid":"0000-0002-8910-3078"},{"name":"Das R","author_orcid":"0000-0001-7497-0972"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Naturally ornate RNA-only complexes revealed by cryo-EM","volume":null,"country":"United States","first_page":null,"last_page":null,"year":"2024","language":null,"doi":"10.1101/2024.12.08.627333","pubmedid":null,"details":"The micrographs are were collected on a 300 kV Titan Krios with 60 e/A2 total dose. The pixel size for micrographs and particle images is 0.86 A.","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"bioRxiv","journal_abbreviation":"","issue":null,"preprint":true}],"dataset_size":"855.3 GB","experiment_type":"EMDB","scale":"molecule","related_pdb_entries":["9ely"],"entry_doi":"10.6019/EMPIAR-12706"}}