{"EMPIAR-12568":{"imagesets":[{"segmentations":[],"name":"Cryo electron micrographs of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2","directory":"data/Movies","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":1521,"frames_per_image":40,"frame_range_min":1,"frame_range_max":40,"voxel_type":"UNSIGNED BYTE","pixel_width":1.072,"pixel_height":1.072,"micrographs_file_pattern":"data/Movies/*.tiff","picked_particles_file_pattern":"","picked_particles_directory":"","details":"These micrographs doesn't need a gain file.","image_width":"11520","image_height":"8184"},{"segmentations":[],"name":"Particles for cryo electron micrographs of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2","directory":"data/cryosparc","category":"picked particles - single frame - unprocessed","header_format":"MRCS","data_format":"MRCS","num_images_or_tilt_series":1497,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"16 BIT FLOAT","pixel_width":1.072,"pixel_height":1.072,"micrographs_file_pattern":"data/cryosparc/J1/imported_mrcs/*.mrcs","picked_particles_file_pattern":"data/cryosparc/J18/P9_J18_passthrough_particles.cs","picked_particles_directory":"data/cryosparc/J1","details":"The folder cryosparc/J1 is \"Imported particles\" of CryoSPARC-v4.3.1, and the particles is imported from \"Particle extraction\" of relion-v3.1.3.\nThe folder cryosparc/J18 is \"Homogeneous Refinement\" of CryoSPARC-v4.3.1, and this \"Homogeneous Refinement\" which imposed C1 symmetry is at a resolution of 3.05 angstrom.\nThe folder cryosparc/J22 is \"Homogeneous Refinement\" of CryoSPARC-v4.3.1, and this \"Homogeneous Refinement\" which imposed C2 symmetry is at a resolution of 2.81 angstrom.","image_width":"256","image_height":"256"}],"workflow_file":null,"grant_references":[{"funding_body":"National Natural Science Foundation of China (NSFC)","code":"31930017","country":"China"}],"version_history":[],"title":"Cryo electron micrographs of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2","principal_investigator":[{"author_orcid":"0000-0002-2075-4235","middle_name":null,"organization":"State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University","street":null,"town_or_city":"Shanghai","state_or_province":null,"post_or_zip":"200438","telephone":null,"fax":null,"first_name":"Aiwu","last_name":"Dong","email":"aiwudong [at] fudan.edu.cn","country":"China","entry":"EMPIAR-12568"}],"status":"REL","deposition_date":"2025-02-14","release_date":"2025-07-25","obsolete_date":null,"update_date":"2025-07-25","corresponding_author":{"author":{"author_orcid":"0000-0001-6786-9032","middle_name":null,"organization":"State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University","street":null,"town_or_city":"Shanghai","state_or_province":null,"post_or_zip":"200438","first_name":"Youchao","last_name":"Wang","country":"China"}},"authors":[{"author":{"name":"Wang Y","author_orcid":"0000-0001-6786-9032"}},{"author":{"name":"Dong A","author_orcid":"0000-0002-2075-4235"}}],"cross_references":["EMD-62037","EMD-62038"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Wang Y","author_orcid":"0000-0001-6786-9032"},{"name":"Wu J","author_orcid":null},{"name":"Yang S","author_orcid":null},{"name":"Li X","author_orcid":null},{"name":"Wang J","author_orcid":null},{"name":"Lv Q","author_orcid":null},{"name":"Zhu X","author_orcid":null},{"name":"Lu G","author_orcid":null},{"name":"Zhang J","author_orcid":null},{"name":"Shen W","author_orcid":null},{"name":"Liu B","author_orcid":null},{"name":"Lin J","author_orcid":null},{"name":"Dong A","author_orcid":null}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Structural and functional interrelationship of histone H2A and its variants H2A.Z and H2A.W in Arabidopsis","volume":null,"country":"","first_page":null,"last_page":null,"year":"2024","language":null,"doi":"10.1101/2024.12.03.626673","pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"bioRxiv","journal_abbreviation":"","issue":null,"preprint":true}],"dataset_size":"1.3 TB","experiment_type":"EMDB","scale":"molecule","related_pdb_entries":["9k41"],"entry_doi":"10.6019/EMPIAR-12568"}}