{"EMPIAR-12519":{"imagesets":[{"segmentations":[],"name":"Cryo electron micrographs of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09","directory":"data/movies","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":3806,"frames_per_image":40,"frame_range_min":1,"frame_range_max":40,"voxel_type":"UNSIGNED BYTE","pixel_width":1.1,"pixel_height":1.1,"micrographs_file_pattern":"data/movies/20220919_glomalin_*.tiff","picked_particles_file_pattern":"","picked_particles_directory":"","details":"","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Gain reference for cryo electron micrographs of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09","directory":"data/gainRefer","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED BYTE","pixel_width":null,"pixel_height":null,"micrographs_file_pattern":"data/gainRefer/K3_gain.mrc","picked_particles_file_pattern":"","picked_particles_directory":"","details":"This gain reference doesn't need rotation and flipping.","image_width":null,"image_height":null},{"segmentations":[],"name":"Particles for cryo electron micrographs of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09","directory":"data/cryosparc","category":"picked particles - single frame - unprocessed","header_format":"MRCS","data_format":"MRCS","num_images_or_tilt_series":2890,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED BYTE","pixel_width":1.1,"pixel_height":1.1,"micrographs_file_pattern":"","picked_particles_file_pattern":"data/cryosparc/J14/P13_J14_passthrough_particles.cs","picked_particles_directory":"data/cryosparc/J1/imported","details":"The folder cryosparc/J1 is \"Imported particles\" of CryoSPARC-v4.3.1, and the particles is imported from \"Particle extraction\" of relion-v3.1.3.\nThe folder cryosparc/J14 is \"Homogeneous Refinement\" of CryoSPARC-v4.3.1, and this \"Homogeneous Refinement\" which imposed D7 symmetry is the final refinement of glomalin at a resolution of 2.85 angstrom.","image_width":"11520","image_height":"8184"}],"workflow_file":null,"grant_references":[{"funding_body":"National Natural Science Foundation of China (NSFC)","code":"32061123007","country":"China"}],"version_history":[],"title":"Cryo electron micrographs of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09","principal_investigator":[{"author_orcid":"0000-0002-3098-2928","middle_name":null,"organization":"State Environmental Protection Key Laboratory of Soil Health and Green Remediation, College of Resources and Environment, Huazhong Agricultural University","street":null,"town_or_city":"Wuhan","state_or_province":null,"post_or_zip":"430070","telephone":null,"fax":null,"first_name":"Wenfeng","last_name":"Tan","email":"tanwf [at] mail.hzau.edu.cn","country":"China","entry":"EMPIAR-12519"}],"status":"REL","deposition_date":"2024-12-26","release_date":"2025-08-05","obsolete_date":null,"update_date":"2025-08-05","corresponding_author":{"author":{"author_orcid":"0000-0001-6786-9032","middle_name":null,"organization":"State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University","street":null,"town_or_city":"Shanghai","state_or_province":null,"post_or_zip":"2000438","first_name":"Youchao","last_name":"Wang","country":"China"}},"authors":[{"author":{"name":"Wang Y","author_orcid":"0000-0001-6786-9032"}},{"author":{"name":"Jia M","author_orcid":"0009-0009-2436-024X"}},{"author":{"name":"Tan W","author_orcid":"0000-0002-3098-2928"}}],"cross_references":["EMD-62049"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Jia M","author_orcid":"0009-0009-2436-024X"},{"name":"Wang Y","author_orcid":"0000-0001-6786-9032"},{"name":"He J","author_orcid":"0000-0002-1456-8284"},{"name":"Chou SH","author_orcid":null},{"name":"Luo D","author_orcid":null},{"name":"Fang L","author_orcid":null},{"name":"Hou J","author_orcid":null},{"name":"Fan Y","author_orcid":null},{"name":"Zhang W","author_orcid":null},{"name":"Chen H","author_orcid":null},{"name":"Zhou D","author_orcid":"0000-0002-4743-6077"},{"name":"Liu Y","author_orcid":null},{"name":"Feng Y","author_orcid":null},{"name":"Koopal L","author_orcid":null},{"name":"Tan W","author_orcid":"0000-0002-3098-2928"}],"editors":[],"published":false,"j_or_nj_citation":true,"title":"Soil aggregates stability is evidently enhanced by super-binding of the N-terminal disordered tail of glomalin to soil minerals","volume":"210","country":"China","first_page":null,"last_page":null,"year":"2025","language":null,"doi":"10.1016/j.soilbio.2025.109908","pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Soil Biology and Biochemistry","journal_abbreviation":"","issue":null,"preprint":false}],"dataset_size":"2.4 TB","experiment_type":"EMDB","scale":"molecule","related_pdb_entries":["9k47"],"entry_doi":"10.6019/EMPIAR-12519"}}