{"EMPIAR-12512":{"imagesets":[{"segmentations":[],"name":"Aligned series set 1, bin-1","directory":"data/munc13_snap25/aligned_series_bin-1","category":"tilt series","header_format":"MRC","data_format":"MRCS","num_images_or_tilt_series":40,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":4.39,"pixel_height":4.39,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"The first set of aligned series, containing 40 out of 80 series. Frames were aligned using MotionCor2 and aligned based on fiducial markers using IMOD.","image_width":"3712","image_height":"3712"},{"segmentations":[],"name":"Aligned series set 2, bin-2","directory":"data/munc13_snap25/aligned_series_bin-2","category":"tilt series","header_format":"MRC","data_format":"MRCS","num_images_or_tilt_series":40,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":8.78,"pixel_height":8.78,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"The second set of aligned series, containing the other 40 out of 80 series. Frames were aligned using MotionCor2 and aligned based on fiducial markers using IMOD.","image_width":"1856","image_height":"1856"},{"segmentations":[],"name":"Tomograms bin-4","directory":"data/munc13_snap25/tomos_bin-4","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":82,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":17.56,"pixel_height":17.56,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Tomograms reconstructed from the two sets of aligned series. There are 82 tomograms because there are 80 tilt series and two tilt series contain two synapses each (other series contain one synapse each).  Tomograms were reconstructed by WBP (ramp filter) in IMOD. No further processing was performed (such as filtering, or denoising).","image_width":"928","image_height":"928"}],"workflow_file":null,"grant_references":[{"funding_body":"Human Frontier Science Program (HFSP)","code":"RGP0020/2019","country":"France"},{"funding_body":"German Research Foundation (DFG)","code":"DFG LU 1819/2-1","country":"Germany"}],"version_history":[],"title":"Cryo-electron tomography of neuronal synapses, Munc13-SNAP25 project","principal_investigator":[{"author_orcid":"0000-0003-3698-7436","middle_name":null,"organization":"Max Planck Institute of Biochemistry","street":"Am Kloperspitz 18","town_or_city":"Martinsried","state_or_province":null,"post_or_zip":"82152","telephone":null,"fax":null,"first_name":"Vladan","last_name":"Lucic","email":"vladan [at] biochem.mpg.de","country":"Germany","entry":"EMPIAR-12512"}],"status":"REL","deposition_date":"2024-12-15","release_date":"2026-01-05","obsolete_date":null,"update_date":"2026-01-05","corresponding_author":{"author":{"author_orcid":"0000-0003-3698-7436","middle_name":null,"organization":"Max Planck Institute of Biochemistry","street":"Am Klopferspitz 18","town_or_city":"Martinsried","state_or_province":null,"post_or_zip":"82152","first_name":"Vladan","last_name":"Lucic","country":"Germany"}},"authors":[{"author":{"name":"Papantoniou C","author_orcid":"0000-0001-7863-3009"}},{"author":{"name":"Lučić V","author_orcid":"0000-0003-3698-7436"}},{"author":{"name":"Orozco-Borunda DH","author_orcid":"0009-0006-7702-9161"}}],"cross_references":["EMD-52343","EMD-52342"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Papantoniou C","author_orcid":"0000-0001-7863-3009"},{"name":"Laugks U","author_orcid":"0000-0003-4175-4354"},{"name":"Betzin J","author_orcid":"0000-0002-9643-1264"},{"name":"Capitanio C","author_orcid":"0000-0002-5297-9156"},{"name":"Ferrero JJ","author_orcid":null},{"name":"Sánchez-Prieto J","author_orcid":null},{"name":"Schoch S","author_orcid":"0000-0002-2046-2670"},{"name":"Brose N","author_orcid":null},{"name":"Baumeister W","author_orcid":"0000-0001-8154-8809"},{"name":"Cooper BH","author_orcid":"0000-0003-2374-9922"},{"name":"Imig C","author_orcid":"0000-0001-7351-8706"},{"name":"Lučić V","author_orcid":"0000-0003-3698-7436"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Munc13- and SNAP25-dependent molecular bridges play a key role in synaptic vesicle priming","volume":"9","country":"","first_page":null,"last_page":null,"year":"2023","language":"English","doi":"10.1126/sciadv.adf6222","pubmedid":"37343100","details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Science advances","journal_abbreviation":"Sci Adv","issue":"25","preprint":false}],"dataset_size":"263.4 GB","experiment_type":"EMDB","scale":"cell","entry_doi":"10.6019/EMPIAR-12512"}}