{"EMPIAR-12193":{"imagesets":[{"segmentations":[],"name":"Raw FAST-EM array tomography electron micrographs from wild-type MCF-7 cells stained with rOTO protocol and neodymium acetate","directory":"data","category":"micrographs - single frame","header_format":"XML","data_format":"TIFF","num_images_or_tilt_series":4805,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED 16 BIT INTEGER","pixel_width":40.0,"pixel_height":40.0,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Raw serial-section (array tomography) data of MCF-7 cells acquired with FAST-EM, ordered per section. Each section directory (SXX) contains 10x10 images covering an area of approximately 240 x 240 microns, with 6.25% overlap between images. Images were acquired with 20 us dwell time.","image_width":"6400","image_height":"6400"}],"workflow_file":null,"grant_references":[{"funding_body":"Netherlands Organisation for Scientific Research (NWO)","code":"184.034.014","country":"Netherlands"},{"funding_body":"Netherlands Organisation for Scientific Research (NWO)","code":"ENPPS.LIFT.019.030","country":"Netherlands"},{"funding_body":"Netherlands Organisation for Scientific Research (NWO)","code":"OCENW.KLEIN.414","country":"Netherlands"}],"version_history":[],"title":"FAST-EM array tomography data of rat pancreas prepared with rOTO protocol and stained with neodymium acetate","principal_investigator":[{"author_orcid":"0000-0003-4539-8772","middle_name":"P.","organization":"Dept of Imaging Physics, TU Delft","street":"Lorentzweg 1","town_or_city":"Delft","state_or_province":null,"post_or_zip":"2628 CJ","telephone":null,"fax":null,"first_name":"Jacob","last_name":"Hoogenboom","email":"j.p.hoogenboom [at] tudelft.nl","country":"Netherlands","entry":"EMPIAR-12193"}],"status":"REL","deposition_date":"2024-06-20","release_date":"2024-11-19","obsolete_date":null,"update_date":"2024-11-19","corresponding_author":{"author":{"author_orcid":"0000-0003-4457-9627","middle_name":null,"organization":"Delft University of Technology, The Netherlands","street":"Lorentzweg 1","town_or_city":"Delft","state_or_province":"Zuid-Holland","post_or_zip":"2628 CJ","first_name":"Arent","last_name":"Kievits","country":"Netherlands"}},"authors":[{"author":{"name":"Kievits AJ","author_orcid":"0000-0003-4457-9627"}},{"author":{"name":"Duinkerken BHP","author_orcid":"0000-0003-0699-0001"}},{"author":{"name":"Lane R","author_orcid":"0000-0002-5887-2069"}},{"author":{"name":"de Heus C","author_orcid":"0000-0001-8618-8451"}},{"author":{"name":"van Beijeren Bergen en Henegouwen D","author_orcid":null}},{"author":{"name":"Höppener T","author_orcid":null}},{"author":{"name":"Wolters AHG","author_orcid":null}},{"author":{"name":"Liv N","author_orcid":"0000-0003-2654-9117"}},{"author":{"name":"Giepmans BNG","author_orcid":"0000-0001-5105-5915"}},{"author":{"name":"Hoogenboom JP","author_orcid":"0000-0003-4539-8772"}}],"cross_references":[],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Kievits AJ","author_orcid":"0000-0003-4457-9627"},{"name":"Duinkerken BHP","author_orcid":"0000-0003-0699-0001"},{"name":"Lane R","author_orcid":"0000-0002-5887-2069"},{"name":"de Heus C","author_orcid":"0000-0001-8618-8451"},{"name":"van Beijeren Bergen En Henegouwen D","author_orcid":null},{"name":"Höppener T","author_orcid":null},{"name":"Wolters AHG","author_orcid":null},{"name":"Liv N","author_orcid":"0000-0003-2654-9117"},{"name":"Giepmans BNG","author_orcid":"0000-0001-5105-5915"},{"name":"Hoogenboom JP","author_orcid":"0000-0003-4539-8772"}],"editors":[{"name":"Kievits AJ","author_orcid":"0000-0003-4457-9627"},{"name":"Hoogenboom JP","author_orcid":"0000-0003-4539-8772"}],"published":true,"j_or_nj_citation":true,"title":"FAST-EM array tomography: a workflow for multibeam volume electron microscopy","volume":"1","country":"Germany","first_page":"49","last_page":"64","year":"2024","language":"English","doi":"10.1515/mim-2024-0005","pubmedid":"39119255","details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Methods in microscopy","journal_abbreviation":"Methods Microsc","issue":"1","preprint":false}],"dataset_size":"479.6 GB","experiment_type":"ATUM-SEM","scale":"tissue","entry_doi":"10.6019/EMPIAR-12193"}}