{"EMPIAR-12175":{"imagesets":[{"segmentations":[],"name":"Aligned tilt series from microsporidian Encephalitozoon hellem","directory":"data/Data_Set_4","category":"tilt series","header_format":"MRCS","data_format":"MRCS","num_images_or_tilt_series":12,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"SIGNED 32 BIT INTEGER","pixel_width":3.298,"pixel_height":3.298,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Each tilt series in this dataset exists in a unique directory with an identifiable ID. Within each directory is a folder called tilt_series where the corresponding aligned tilt series and tilt file can be found.","image_width":"4200","image_height":"4200"},{"segmentations":[],"name":"Reconstructed tomograms from microsporidian Encephalitozoon hellem","directory":"data/Data_Set_4","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":12,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":3.298,"pixel_height":3.298,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Each reconstructed tomogram in this dataset exists in a unique directory with an identifiable ID. Within each directory is a folder called tomo_rec where the 2X binned reconstruction produced using protomo can be found.","image_width":null,"image_height":null}],"workflow_file":null,"grant_references":[{"funding_body":"National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)","code":"F32GM128303","country":"United States"},{"funding_body":"American Heart Association","code":"19POST34430065","country":"United States"},{"funding_body":"Pew Biomedical Scholars","code":"PEW-00033055","country":"United States"},{"funding_body":"Searle Scholars Program","code":"SSP-2018-2737","country":"United States"},{"funding_body":"National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)","code":"R01AI147131","country":"United States"},{"funding_body":"Simons Foundation","code":"SF349247","country":"United States"},{"funding_body":"National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)","code":"GM103310","country":"United States"},{"funding_body":"National Institutes of Health (NIH)","code":"U24GM139171","country":"United States"}],"version_history":[],"title":"Cryo-ET dataset of dormant microsporidian spores from Encephalitozoon hellem","principal_investigator":[{"author_orcid":"0000-0002-0624-5020","middle_name":null,"organization":"Chan Zuckerberg Imaging Institute","street":null,"town_or_city":"Redwood City","state_or_province":"CA","post_or_zip":"94065","telephone":null,"fax":null,"first_name":"Bridget","last_name":"Carragher","email":"bcarragher [at] czii.org","country":"United States","entry":"EMPIAR-12175"},{"author_orcid":null,"middle_name":null,"organization":"Chan Zuckerberg Imaging Institute","street":null,"town_or_city":"Redwood City","state_or_province":"CA","post_or_zip":"94065","telephone":null,"fax":null,"first_name":"Clinton","last_name":"Potter","email":"cpotter [at] czii.org","country":"United States","entry":"EMPIAR-12175"},{"author_orcid":"0000-0002-2570-0404","middle_name":"C","organization":"Department of Biology, Johns Hopkins University","street":null,"town_or_city":"Baltimore","state_or_province":"MD","post_or_zip":"21218","telephone":null,"fax":null,"first_name":"Damian","last_name":"Ekiert","email":"DEKIERT1 [at] JH.EDU","country":"United States","entry":"EMPIAR-12175"},{"author_orcid":"0000-0003-0624-6178","middle_name":null,"organization":"Department of Biology, Johns Hopkins University","street":null,"town_or_city":"Baltimore","state_or_province":"MD","post_or_zip":"21218","telephone":null,"fax":null,"first_name":"Gira","last_name":"Bhabha","email":"GBHABHA1 [at] JH.EDU","country":"United States","entry":"EMPIAR-12175"}],"status":"REL","deposition_date":"2024-06-10","release_date":"2025-05-22","obsolete_date":null,"update_date":"2025-05-22","corresponding_author":{"author":{"author_orcid":"0000-0002-9479-3800","middle_name":null,"organization":"New York University","street":null,"town_or_city":"New York","state_or_province":null,"post_or_zip":"10016","first_name":"Mahrukh","last_name":"Usmani","country":"United States"}},"authors":[{"author":{"name":"Kelley K","author_orcid":null}},{"author":{"name":"Bhabha G","author_orcid":"0000-0003-0624-6178"}},{"author":{"name":"Potter CS","author_orcid":null}},{"author":{"name":"Carragher B","author_orcid":"0000-0002-0624-5020"}},{"author":{"name":"Noble AJ","author_orcid":"0000-0001-8634-2279"}}],"cross_references":[],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Kelley K","author_orcid":null},{"name":"Raczkowski AM","author_orcid":"0000-0002-8572-5857"},{"name":"Klykov O","author_orcid":"0000-0003-4401-9400"},{"name":"Jaroenlak P","author_orcid":"0000-0002-2036-232X"},{"name":"Bobe D","author_orcid":"0000-0002-7388-8907"},{"name":"Kopylov M","author_orcid":"0000-0003-0188-9799"},{"name":"Eng ET","author_orcid":"0000-0002-8014-7269"},{"name":"Bhabha G","author_orcid":"0000-0003-0624-6178"},{"name":"Potter CS","author_orcid":null},{"name":"Carragher B","author_orcid":"0000-0002-0624-5020"},{"name":"Noble AJ","author_orcid":"0000-0001-8634-2279"},{"name":"Usmani M","author_orcid":"0000-0002-9479-3800"},{"name":"Coudray N","author_orcid":null},{"name":"Riggi M","author_orcid":null},{"name":"Raghu R","author_orcid":"0009-0006-6651-142X"},{"name":"Ramchandani H","author_orcid":"0009-0007-9517-3658"},{"name":"Bobe D","author_orcid":null},{"name":"Kopylov M","author_orcid":null},{"name":"Zhong ED","author_orcid":null},{"name":"Iwasa JH","author_orcid":null},{"name":"Ekiert DC","author_orcid":null}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Cryo-ET reveals the in situ architecture of the polar tube invasion apparatus from microsporidian parasites","volume":"122","country":"","first_page":null,"last_page":null,"year":"2025","language":"English","doi":"10.1073/pnas.2415233122","pubmedid":"40067903","details":"Currently cryo-ET data without a corresponding EMDB entry is not a supported entry data type in EMPIAR. To circumvent this issue we have referenced EMD-45674. However, this EMDB entry comes from a different dataset that we are depositing simultaneously.","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Proceedings of the National Academy of Sciences of the United States of America","journal_abbreviation":"Proc Natl Acad Sci U S A","issue":"11","preprint":false},{"authors":[{"name":"Usmani M","author_orcid":"0000-0002-9479-3800"},{"name":"Coudray N","author_orcid":"0000-0002-6050-2219"},{"name":"Riggi M","author_orcid":"0000-0002-8930-5331"},{"name":"Raghu R","author_orcid":"0009-0006-6651-142X"},{"name":"Ramchandani H","author_orcid":null},{"name":"Bobe D","author_orcid":"0000-0002-7388-8907"},{"name":"Kopylov M","author_orcid":"0000-0003-0188-9799"},{"name":"Zhong ED","author_orcid":"0000-0001-6345-1907"},{"name":"Iwasa JH","author_orcid":"0000-0002-4949-7607"},{"name":"Ekiert DC","author_orcid":"0000-0002-2570-0404"},{"name":"Bhabha G","author_orcid":"0000-0003-0624-6178"}],"editors":[],"published":false,"j_or_nj_citation":true,"title":"Cryo-ET reveals the in situ architecture of the polar tube invasion apparatus from microsporidian parasites","volume":null,"country":"United States","first_page":null,"last_page":null,"year":null,"language":null,"doi":null,"pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"","journal_abbreviation":"","issue":null,"preprint":true}],"dataset_size":"252.1 GB","experiment_type":"Exception","scale":"cell","entry_doi":"10.6019/EMPIAR-12175"}}