{"EMPIAR-11861":{"imagesets":[{"segmentations":[],"name":"Unaligned movies in compressed TIFF format collected on a K3 detector (dataset 1)","directory":"data/TREX-mRNP_SPA/frames_dataset1","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":11756,"frames_per_image":40,"frame_range_min":1,"frame_range_max":40,"voxel_type":"UNSIGNED BYTE","pixel_width":1.381,"pixel_height":1.381,"micrographs_file_pattern":"data/TREX-mRNP_SPA/frames_dataset1/*tif","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Unaligned movies in compressed TIFF format collected on a K3 detector with a total dose of 60 e-/Å2 (dataset 1)","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Motion-corrected micrographs (dataset 1)","directory":"data/TREX-mRNP_SPA/motioncorrected_dataset1","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":11756,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.381,"pixel_height":1.381,"micrographs_file_pattern":"data/TREX-mRNP_SPA/motioncorrected_dataset1/*mrc","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Aligned micrographs (dataset 1)","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Unaligned movies in compressed TIFF format collected on a K3 detector (dataset 2)","directory":"data/TREX-mRNP_SPA/frames_dataset2","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":10182,"frames_per_image":40,"frame_range_min":1,"frame_range_max":40,"voxel_type":"UNSIGNED BYTE","pixel_width":1.381,"pixel_height":1.381,"micrographs_file_pattern":"data/TREX-mRNP_SPA/frames_dataset2/*tif","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Unaligned movies in compressed TIFF format collected on a K3 detector with a total dose of 60 e-/Å2 (dataset 2)","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Motion-corrected micrographs (dataset 2)","directory":"data/TREX-mRNP_SPA/motioncorrected_dataset2","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":10182,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.381,"pixel_height":1.381,"micrographs_file_pattern":"data/TREX-mRNP_SPA/motioncorrected_dataset2/*.mrc","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Aligned micrographs (dataset 1)","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Gainref file for motion correction of compressed tiff movies (dataset 1)","directory":"data/TREX-mRNP_SPA/gainref_dataset1","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.381,"pixel_height":1.381,"micrographs_file_pattern":"data/TREX-mRNP_SPA/gainref_dataset1/CountRef_BP06_1_131-239_000_-0.0_Feb17.mrc","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Gainref file for motion correction of dataset 1","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"Gainref file for motion correction of compressed tiff movies (dataset 2)","directory":"data/TREX-mRNP_SPA/gainref_dataset2","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.381,"pixel_height":1.381,"micrographs_file_pattern":"data/TREX-mRNP_SPA/gainref_dataset2/CountRef_BP07_g2_106-25_000_-0.0_Jun02.mrc","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Gainref file for motion correction of dataset 2","image_width":"5760","image_height":"4092"}],"workflow_file":null,"grant_references":[{"funding_body":"European Research Council (ERC)","code":"ERC-2020-STG 949081 RNApaxport","country":"Belgium"},{"funding_body":"Welch Foundation","code":"203149","country":"United Kingdom"},{"funding_body":"European Molecular Biology Organization (EMBO)","code":"ALTF 623-2020","country":"Germany"},{"funding_body":"European Research Council (ERC)","code":"MCSA 101028744","country":"Belgium"}],"version_history":[],"title":"Structure of an endogenous human TREX complex bound to mRNA (single particle cryo-EM dataset)","principal_investigator":[{"author_orcid":"0000-0002-6020-9514","middle_name":null,"organization":"Forschungsinstitut für Molekulare Pathologie","street":"Campus-Vienna-Biocenter 1","town_or_city":"Wien","state_or_province":null,"post_or_zip":"1030","telephone":null,"fax":null,"first_name":"Clemens","last_name":"Plaschka","email":"clemens.plaschka [at] imp.ac.at","country":"Austria","entry":"EMPIAR-11861"}],"status":"REL","deposition_date":"2024-01-16","release_date":"2024-05-13","obsolete_date":null,"update_date":"2024-05-13","corresponding_author":{"author":{"author_orcid":"0000-0001-5975-5609","middle_name":"Kopano","organization":"Forschungsinstitut für Molekulare Pathologie","street":"Campus-Vienna-Biocenter 1","town_or_city":"Wien","state_or_province":null,"post_or_zip":"1030","first_name":"Matthias","last_name":"Vorländer","country":"Austria"}},"authors":[{"author":{"name":"Pacheco-Fiallos B","author_orcid":null}},{"author":{"name":"Vorländer MK","author_orcid":"0000-0001-5975-5609"}},{"author":{"name":"Plaschka C","author_orcid":"0000-0002-6020-9514"}}],"cross_references":["EMD-14804"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Pacheco-Fiallos B","author_orcid":null},{"name":"Vorländer MK","author_orcid":"0000-0001-5975-5609"},{"name":"Riabov-Bassat D","author_orcid":null},{"name":"Fin L","author_orcid":null},{"name":"O'Reilly FJ","author_orcid":"0000-0001-9258-0150"},{"name":"Ayala FI","author_orcid":"0000-0002-7844-0570"},{"name":"Schellhaas U","author_orcid":"0000-0002-9684-9839"},{"name":"Rappsilber J","author_orcid":"0000-0001-5999-1310"},{"name":"Plaschka C","author_orcid":"0000-0002-6020-9514"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"mRNA recognition and packaging by the human transcription-export complex","volume":"616","country":"","first_page":"828","last_page":"835","year":"2023","language":"English","doi":"10.1038/s41586-023-05904-0","pubmedid":"37020021","details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Nature","journal_abbreviation":"Nature","issue":"7958","preprint":false}],"dataset_size":"6.6 TB","experiment_type":"EMDB","scale":"molecule","related_pdb_entries":["7znk"],"entry_doi":"10.6019/EMPIAR-11861"}}