{"EMPIAR-11841":{"imagesets":[{"segmentations":[],"name":"Unaligned frames for all tilts of all tilt series of Yeast lamellae using SPACEtomo","directory":"data/frames","category":"micrographs - multiframe","header_format":"MRC","data_format":"TIFF","num_images_or_tilt_series":41,"frames_per_image":10,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED BYTE","pixel_width":2.09,"pixel_height":2.09,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"camera orientation: rotation by 90, flipped around y axis","image_width":"4092","image_height":"5760"},{"segmentations":[],"name":"Projections of reconstructed tomograms using AreTomo2","directory":"data/projections","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":16.72,"pixel_height":16.72,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Automatically XY projections from AreTomo2 reconstructions of all tomograms for screening tilt series content.","image_width":"510","image_height":"720"},{"segmentations":[],"name":"Montages of lamellae and grids collected by SPACEtomo","directory":"data/montages","category":"stitched maps","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"SIGNED 16 BIT INTEGER","pixel_width":18.9,"pixel_height":18.9,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Montages of lamellae of varying sizes and full grids collected automatically by SPACEtomo","image_width":"4092","image_height":"5760"},{"segmentations":[],"name":"Meta information in form of mdoc files for all tilt series","directory":"data/mdocs","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":41,"frames_per_image":10,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED BYTE","pixel_width":2.09,"pixel_height":2.09,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"All mdoc files (unsorted) without dose information. Dose was 4.35 e/A^2/tilt.","image_width":null,"image_height":null}],"workflow_file":null,"grant_references":[{"funding_body":"Japan Society for the Promotion of Science (JSPS)","code":"22H02554","country":"Japan"}],"version_history":[],"title":"Automatically collected tilt series on cryoFIB milled lamellae of Baker's Yeast","principal_investigator":[{"author_orcid":"0000-0002-1261-7126","middle_name":null,"organization":"Graduate School of Medicine, The University of Tokyo","street":"N415, Experimental Research Building, 7-3-1 Hongo, Bunkyo-ku","town_or_city":"Tokyo","state_or_province":"Tokyo","post_or_zip":"113-0033","telephone":"81358413413","fax":null,"first_name":"Radostin","last_name":"Danev","email":"rado [at] m.u-tokyo.ac.jp","country":"Japan","entry":"EMPIAR-11841"}],"status":"REL","deposition_date":"2023-12-12","release_date":"2024-07-03","obsolete_date":null,"update_date":"2024-07-04","corresponding_author":{"author":{"author_orcid":"0000-0002-1261-7126","middle_name":null,"organization":"Graduate School of Medicine, The University of Tokyo","street":"N415, Experimental Research Building, 7-3-1 Hongo, Bunkyo-ku","town_or_city":"Tokyo","state_or_province":"Tokyo","post_or_zip":"113-0033","first_name":"Fabian","last_name":"Eisenstein","country":"Japan"}},"authors":[{"author":{"name":"Eisenstein F","author_orcid":"0000-0002-1261-7126"}},{"author":{"name":"Fukuda Y","author_orcid":"0000-0003-2368-6618"}},{"author":{"name":"Danev R","author_orcid":"0000-0001-6406-8993"}}],"cross_references":["EMD-38295"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Eisenstein F","author_orcid":"0000-0002-1261-7126"},{"name":"Fukuda Y","author_orcid":"0000-0003-2368-6618"},{"name":"Danev R","author_orcid":"0000-0001-6406-8993"}],"editors":[],"published":false,"j_or_nj_citation":true,"title":"Smart Parallel Automated Cryo Electron tomography","volume":null,"country":"","first_page":null,"last_page":null,"year":"2023","language":"English","doi":null,"pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"bioRxiv","journal_abbreviation":"","issue":null,"preprint":true}],"dataset_size":"1.2 TB","experiment_type":"EMDB","scale":"cell","entry_doi":"10.6019/EMPIAR-11841"}}