{"EMPIAR-11791":{"imagesets":[{"segmentations":[],"name":"Unaligned multiframe movies of AAV2 collected at various tilts","directory":"data/movies","category":"micrographs - multiframe","header_format":"MRCS","data_format":"MRCS","num_images_or_tilt_series":1229,"frames_per_image":200,"frame_range_min":1,"frame_range_max":200,"voxel_type":"32 BIT FLOAT","pixel_width":1.026,"pixel_height":1.026,"micrographs_file_pattern":"data/micrographs/T*0/*mrc","picked_particles_file_pattern":"data/stack/AAV2-T*0-Polished.star","picked_particles_directory":"data/stack","details":"Movies collected using Titan Krios and K2 summit. Tilt angles of 0, 10, 20, 30, 40, 50 and 60 degrees were collected put into their respective folders. 200 frames were used, pixel size is 1.026 Å/pixel, total dose of 78.0 e-/Å2. Compressed using pbzip2. Gain reference is 17jun01a_01155404_17_3838x3710_norm_0.mrc and needs to be flipped upside down to use.","image_width":"3710","image_height":"3838"},{"segmentations":[],"name":"Aligned and dose-weighted micrographs of AAV2 collected at various tilts","directory":"data/micrographs","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1229,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.026,"pixel_height":1.026,"micrographs_file_pattern":"data/micrographs/T*0/*mrc","picked_particles_file_pattern":"data/stack/AAV2-T*0-Polished.star","picked_particles_directory":"data/stack","details":"Aligned and dose weighted using UCSF MotionCor2. Tilt angles of 0, 10, 20, 30, 40, 50 and 60 degrees were collected put into their respective folders.","image_width":"3710","image_height":"3838"},{"segmentations":[],"name":"Polished and equalized particles of AAV2 collected at various tilts","directory":"data/stack","category":"picked particles - multiframe - processed","header_format":"MRCS","data_format":"MRCS","num_images_or_tilt_series":7,"frames_per_image":7000,"frame_range_min":1,"frame_range_max":7000,"voxel_type":"32 BIT FLOAT","pixel_width":1.026,"pixel_height":1.026,"micrographs_file_pattern":"data/micrographs/T*0/*mrc","picked_particles_file_pattern":"data/stack/AAV2-T*0-Polished.star","picked_particles_directory":"data/stack","details":"Final particle stack after particle polishing using Relion. The particles are equalized so that there are same number of particles per tilt angle with similar defocus distribution.","image_width":"600","image_height":"600"}],"workflow_file":null,"grant_references":[{"funding_body":"National Institutes of Health (NIH)","code":"U54 AI170855","country":"United States"},{"funding_body":"National Institutes of Health (NIH)","code":"U01 AI136680","country":"United States"},{"funding_body":"National Institutes of Health (NIH)","code":"GM148476","country":"United States"},{"funding_body":"National Institutes of Health (NIH)","code":"GM082946","country":"United States"},{"funding_body":"National Science Foundation (NSF, United States)","code":"MCB 2048095","country":"United States"},{"funding_body":"Other private","code":"Hearst Foundations Developmental Chair","country":"United States"},{"funding_body":"Other private","code":"Margaret T. Morris Foundation","country":"United States"},{"funding_body":"National Research Foundation (NRF, Singapore)","code":"NRF Fellowship A-8001346-00-00","country":"Singapore"},{"funding_body":"Other government","code":"National University of Singapore (PYP Fellowship A-0008405-00-00, A-0008405-01-00)","country":"Singapore"},{"funding_body":"Ministry of Education (MoE, Singapore)","code":"MOE AcRF Tier 1 A-8000037-00-00","country":"Singapore"},{"funding_body":"Ministry of Education (MoE, Singapore)","code":"MOE AcRF Tier 2 A-6100427-01-00","country":"Singapore"},{"funding_body":"Other government","code":"Agency for Science, Technology and Research, Singapore","country":"Singapore"},{"funding_body":"Damon Runyon Cancer Research Foundation","code":"Nadia’s Gift Foundation Innovator Award DRR-65-21","country":"United States"},{"funding_body":"American Cancer Society","code":"PF-21-075-01-CCB","country":"United States"},{"funding_body":"Other government","code":"Cancer Center Support Grant P30 CA01495t","country":"United States"},{"funding_body":"National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)","code":"GM103310","country":"United States"},{"funding_body":"Simons Foundation","code":"SF349247","country":"United States"},{"funding_body":"Other government","code":"NYSTAR","country":"United States"},{"funding_body":"Other government","code":"S10 OD032467","country":"United States"},{"funding_body":"National Science Foundation (NSF, United States)","code":"MCB-1939086","country":"United States"}],"version_history":[],"title":"Single-Particle Cryo-EM of AAV2 at Various Tilts","principal_investigator":[{"author_orcid":"0000-0001-6656-6320","middle_name":null,"organization":"National University of Singapore","street":"14 Science Drive 4 Singapore","town_or_city":"Singapore","state_or_province":null,"post_or_zip":"117543","telephone":"+65 6516 7835","fax":null,"first_name":"Yong Zi","last_name":"Tan","email":"yztan [at] nus.edu.sg","country":"Singapore","entry":"EMPIAR-11791"},{"author_orcid":"0000-0002-8124-7472","middle_name":null,"organization":"Salk Institute","street":"10010 N. Torrey Pines Rd.","town_or_city":"San Diego","state_or_province":"California","post_or_zip":"92037","telephone":"+1 858-453-4100 x1155","fax":null,"first_name":"Dmitry","last_name":"Lyumkis","email":"dlyumkis [at] salk.edu","country":"United States","entry":"EMPIAR-11791"}],"status":"REL","deposition_date":"2023-11-23","release_date":"2024-02-13","obsolete_date":null,"update_date":"2024-02-13","corresponding_author":{"author":{"author_orcid":"0000-0001-6656-6320","middle_name":null,"organization":"National University of Singapore","street":"14 Science Drive 4 Singapore","town_or_city":"Singapore","state_or_province":null,"post_or_zip":"117543","first_name":"Yong Zi","last_name":"Tan","country":"Singapore"}},"authors":[{"author":{"name":"Aiyer S","author_orcid":"0000-0001-6436-0521"}},{"author":{"name":"Baldwin PR","author_orcid":"0000-0002-4202-4129"}},{"author":{"name":"Tan SM","author_orcid":"0000-0002-0231-3620"}},{"author":{"name":"Shan Z","author_orcid":"0000-0003-4983-3575"}},{"author":{"name":"Oh J","author_orcid":"0000-0002-7625-2779"}},{"author":{"name":"Mehrani A","author_orcid":"0000-0001-5239-955X"}},{"author":{"name":"Bowman ME","author_orcid":null}},{"author":{"name":"Louie G","author_orcid":"0000-0002-8043-4348"}},{"author":{"name":"Passos DO","author_orcid":"0000-0003-1333-9102"}},{"author":{"name":"Đorđević-Marquardt S","author_orcid":"0000-0003-0170-5304"}},{"author":{"name":"Mietzsch M","author_orcid":"0000-0001-8957-3363"}},{"author":{"name":"Hull JA","author_orcid":"0000-0003-0847-385X"}},{"author":{"name":"Hoshika S","author_orcid":"0000-0001-9128-1183"}},{"author":{"name":"Barad BA","author_orcid":"0000-0002-1016-862X"}},{"author":{"name":"Grotjahn DA","author_orcid":"0000-0001-5908-7882"}},{"author":{"name":"McKenna R","author_orcid":"0000-0001-5129-7850"}},{"author":{"name":"Agbandje-McKenna M","author_orcid":"0000-0003-0565-5578"}},{"author":{"name":"Benner 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