{"EMPIAR-11722":{"imagesets":[{"segmentations":[],"name":"K3 movies for non gastric proton pump WT with Na, AlF and ADP","directory":"data/8IJL/","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":1723,"frames_per_image":64,"frame_range_min":2,"frame_range_max":64,"voxel_type":"UNSIGNED BYTE","pixel_width":0.83,"pixel_height":0.83,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"- Please use 'movie_gain_ref_estimate.mrc' as a gain reference without rotation or flipping in RELION.\n- The gain reference (movie_gain_ref_estimate.mrc) was generated with relion_estimate_gain by averaging many frames.\n- The flux is 1.06 e/A2/frame.\n- Cs is 2.7 mm.\n- Four digits in the file name represent image shift directions.\n- Movies were recorded with 3x3 image shift but grouping was not applied during processing.","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"K3 movies for non gastric proton pump K794A mutant in NaE1AMPPCP state","directory":"data/8IJM/","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":3204,"frames_per_image":48,"frame_range_min":2,"frame_range_max":48,"voxel_type":"UNSIGNED BYTE","pixel_width":0.83,"pixel_height":0.83,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"- Please use 'CountRef_abe1-3_11-001_0000_Sep09_09.26.25.mrc' as a gain reference without rotation or flipping in RELION.\n- The flux is 1.06 e/A2/frame.\n- Cs is 2.7 mm.\n- Four digits in the file name represent image shift directions.\n- Movies were recorded with 3x3 image shift but grouping was not applied during processing.","image_width":"5760","image_height":"4092"},{"segmentations":[],"name":"K3 movies for non gastric proton pump K794S mutant in NaE1AMPPCP state","directory":"data/EMD-35491","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":2187,"frames_per_image":48,"frame_range_min":2,"frame_range_max":48,"voxel_type":"UNSIGNED BYTE","pixel_width":0.83,"pixel_height":0.83,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"- Please use 'CountRef_abe2-1_22-001_0000_Sep10_01.28.37.mrc' as a gain reference without rotation or flipping in RELION.\n- The flux is 1.06 e/A2/frame.\n- Cs is 2.7 mm.\n- Four digits in the file name represent image shift directions.\n- Movies were recorded with 3x3 image shift but grouping was not applied during processing.","image_width":"5760","image_height":"4092"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"Cyo-EM structure of wildtype non-gastric proton pump in the presence of Na+, AlF and ADP","principal_investigator":[{"author_orcid":"0000-0003-2681-5921","middle_name":null,"organization":"Cellular and Structural Physiology Institute, Nagoya University","street":"1, Furo-cho, Chikusa-ku","town_or_city":"Nagoya","state_or_province":"Aichi","post_or_zip":"464-8601","telephone":"+81-52-747-6838","fax":null,"first_name":"Kazuhiro","last_name":"Abe","email":"kabe [at] cespi.nagoya-u.ac.jp","country":"Japan","entry":"EMPIAR-11722"}],"status":"REL","deposition_date":"2023-10-11","release_date":"2024-08-23","obsolete_date":null,"update_date":"2024-08-23","corresponding_author":{"author":{"author_orcid":"0000-0003-2681-5921","middle_name":null,"organization":"Cellular and Structural Physiology Institute, Nagoya University","street":"1, Furo-cho, Chikusa-ku","town_or_city":"Nagoya","state_or_province":"Aichi","post_or_zip":"464-8601","first_name":"Kazuhiro","last_name":"Abe","country":"Japan"}},"authors":[{"author":{"name":"Abe K","author_orcid":"0000-0003-2681-5921"}},{"author":{"name":"Artigas P","author_orcid":null}}],"cross_references":["EMD-35488","EMD-35489","EMD-35491"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Abe K","author_orcid":null},{"name":"Nishizawa T","author_orcid":null},{"name":"Artigas P","author_orcid":null}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"An unusual conformation from Na + -sensitive non-gastric proton pump mutants reveals molecular mechanisms of cooperative Na + -binding.","volume":"1870","country":"","first_page":null,"last_page":null,"year":"2023","language":"English","doi":"10.1016/j.bbamcr.2023.119543","pubmedid":"37482134","details":"non-gastric proton pump WT E2-Pi state in the presence of Na+ AlF and ADP.","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Biochimica Biophysica Acta Molecular Cell Research","journal_abbreviation":"Biochim Biophys Acta Mol Cell Res","issue":null,"preprint":false}],"dataset_size":"1.7 TB","experiment_type":"EMDB","scale":"molecule","related_pdb_entries":["8ijl","8ijm"],"entry_doi":"10.6019/EMPIAR-11722"}}