{"EMPIAR-11681":{"imagesets":[{"segmentations":[],"name":"Unaligned multi-frame micrographs of Swc5/nucleosome complex","directory":"data/movies","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":13855,"frames_per_image":50,"frame_range_min":1,"frame_range_max":50,"voxel_type":"UNSIGNED BYTE","pixel_width":0.394,"pixel_height":0.394,"micrographs_file_pattern":"data/movies/stack_*.tif","picked_particles_file_pattern":"","picked_particles_directory":"data/particles","details":"Voltage 300 keV, Cs 2.7 mm, total dose 50 e-/Å^2, super-resolution pixel size 0.394 Å/px. The TIFF movies are not gain-corrected, the gain-reference image for the dataset is SuperRef_stack_00000_X+0Y-1-1.dm4 and gain.mrc.","image_width":"11520","image_height":"8184"},{"segmentations":[],"name":"High-resolution particles obtained after filtering with random-phase 3D classification","directory":"data/particles","category":"picked particles - multiframe - processed","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":974026,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.182,"pixel_height":1.182,"micrographs_file_pattern":"","picked_particles_file_pattern":"data/classes/*_particles.star","picked_particles_directory":"","details":"Selected particles obtained after multiple rounds of heterogenous refinement against a low-pass filtered reconstruction. Particles were extracted from motion-corrected micrographs that were f-cropped by factor of 1/2. Extraction box size 324 px Fourier cropped to 216 px. These were used for final 3D classification and refinement. The 3D classes are listed as star-files in data/classes.","image_width":"216","image_height":"216"}],"workflow_file":null,"grant_references":[{"funding_body":"National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)","code":"R35GM122519","country":"United States"},{"funding_body":"National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)","code":"R35GM127034","country":"United States"},{"funding_body":"Estonian Research Council","code":"PUTJD906","country":"Estonia"},{"funding_body":"National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)","code":"U24GM129547","country":"United States"}],"version_history":[],"title":"Cryo-EM structure of yeast SWR1C subunit Swc5 bound to the nucleosome","principal_investigator":[{"author_orcid":"0000-0002-6698-8475","middle_name":null,"organization":"Department of Biochemistry and Molecular Biology, The Pennsylvania State University","street":"469 North Frear Lab","town_or_city":"University Park","state_or_province":"Pennsylvania","post_or_zip":"16802","telephone":null,"fax":null,"first_name":"Song","last_name":"Tan","email":"sxt30 [at] psu.edu","country":"United States","entry":"EMPIAR-11681"}],"status":"REL","deposition_date":"2023-09-05","release_date":"2024-06-06","obsolete_date":null,"update_date":"2024-06-06","corresponding_author":{"author":{"author_orcid":"0000-0003-0702-9466","middle_name":null,"organization":"Department of Chemistry and Biotechnology, Tallinn University of Technology","street":"Akadeemia tee 15","town_or_city":"Tallinn","state_or_province":"Harjumaa","post_or_zip":"12618","first_name":"Priit","last_name":"Eek","country":"Estonia"}},"authors":[{"author":{"name":"Eek P","author_orcid":"0000-0003-0702-9466"}},{"author":{"name":"Song T","author_orcid":"0000-0002-6698-8475"}}],"cross_references":["EMD-41852","EMD-41853","EMD-41851","EMD-41839"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Baier AS","author_orcid":"0000-0003-1647-9477"},{"name":"Gioacchini N","author_orcid":"0000-0003-3810-393X"},{"name":"Eek P","author_orcid":"0000-0003-0702-9466"},{"name":"Leith EM","author_orcid":null},{"name":"Song T","author_orcid":"0000-0002-6698-8475"},{"name":"Peterson CL","author_orcid":"0000-0002-9448-555X"}],"editors":[],"published":false,"j_or_nj_citation":true,"title":"Dual engagement of the nucleosomal acidic patches is essential for deposition of histone H2A.Z by SWR1C","volume":null,"country":"","first_page":null,"last_page":null,"year":null,"language":null,"doi":"10.7554/eLife.94869.2","pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"eLife","journal_abbreviation":"","issue":null,"preprint":false}],"dataset_size":"5.9 TB","experiment_type":"EMDB","scale":"molecule","entry_doi":"10.6019/EMPIAR-11681"}}