{"EMPIAR-11042":{"imagesets":[{"segmentations":[],"name":"Unfiltered iDPC-STEM micrographs","directory":"data/raw","category":"micrographs - single frame","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":19,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED 16 BIT INTEGER","pixel_width":0.98,"pixel_height":0.98,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Particle coordinates in the corresponding .box files in the folder coordinates, with the x- and y-coordinates in the first and second column.","image_width":"4096","image_height":"4096"},{"segmentations":[],"name":"Gaussian high-pass filtered iDPC-STEM micrographs","directory":"data/Gauss40","category":"micrographs - single frame","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":19,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED 16 BIT INTEGER","pixel_width":0.98,"pixel_height":0.98,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Micrographs were Gaussian high-pass filtered with a Gauss filter (standard implementation) with a standard deviation of 40 Å, which translates to a standard deviation of 251 Å taking the factor two pi into account. This micrographs were used for the reconstruction of the linked EMD entry. Particle coordinates in the corresponding .box files in the folder coordinates, with the x- and y-coordinates in the first and second column.","image_width":"4096","image_height":"4096"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"Cryo-iDPC-STEM structure of TMV - convergence semi-angle 4.0 mrad","principal_investigator":[{"author_orcid":"0000-0001-5238-952X","middle_name":null,"organization":"Materials and Structural Analysis Division, Thermo Fisher Scientific","street":"Achtseweg Noord 5","town_or_city":"Eindhoven","state_or_province":null,"post_or_zip":"5651 GG","telephone":null,"fax":null,"first_name":"Ivan","last_name":"Lazić","email":"ivan.lazic [at] thermofisher.com","country":"Netherlands","entry":"EMPIAR-11042"},{"author_orcid":"0000-0002-1168-5143","middle_name":null,"organization":"Structural Biology, Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons, Forschungszentrum Jülich GmbH","street":"Wilhelm-Johnen-Straße","town_or_city":"Jülich","state_or_province":"North Rhine-Westphalia","post_or_zip":"52425","telephone":null,"fax":null,"first_name":"Carsten","last_name":"Sachse","email":"c.sachse [at] fz-juelich.de","country":"Germany","entry":"EMPIAR-11042"}],"status":"REL","deposition_date":"2022-04-29","release_date":"2023-03-03","obsolete_date":null,"update_date":"2023-03-03","corresponding_author":{"author":{"author_orcid":"0000-0002-1168-5143","middle_name":null,"organization":"Structural Biology, Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons, Forschungszentrum Jülich GmbH","street":"Wilhelm-Johnen-Straße","town_or_city":"Jülich","state_or_province":"North Rhine-Westphalia","post_or_zip":"52425","first_name":"Carsten","last_name":"Sachse","country":"Germany"}},"authors":[{"author":{"name":"Lazić I","author_orcid":"0000-0001-5238-952X"}},{"author":{"name":"Wirix M","author_orcid":"0000-0002-0463-1462"}},{"author":{"name":"Leidl ML","author_orcid":"0000-0001-8896-1647"}},{"author":{"name":"Sachse C","author_orcid":"0000-0002-1168-5143"}}],"cross_references":["EMD-13781"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Lazić I","author_orcid":"0000-0001-5238-952X"},{"name":"Wirix M","author_orcid":"0000-0002-0463-1462"},{"name":"Leidl ML","author_orcid":"0000-0001-8896-1647"},{"name":"de Haas F","author_orcid":"0000-0002-4544-5156"},{"name":"Mann D","author_orcid":"0000-0002-9106-9358"},{"name":"Beckers M","author_orcid":"0000-0001-5988-1322"},{"name":"Pechnikova EV","author_orcid":"0000-0001-6142-2037"},{"name":"Müller-Caspary K","author_orcid":"0000-0002-2588-7993"},{"name":"Egoavil R","author_orcid":"0000-0003-3191-8132"},{"name":"Bosch EGT","author_orcid":"0000-0002-6465-1879"},{"name":"Sachse C","author_orcid":"0000-0002-1168-5143"}],"editors":[{"name":"Singh A","author_orcid":"0000-0001-5885-7478"}],"published":true,"j_or_nj_citation":true,"title":"Single-particle cryo-EM structures from iDPC-STEM at near-atomic resolution","volume":"19","country":"","first_page":"1126","last_page":"1136","year":"2022","language":"English","doi":"10.1038/s41592-022-01586-0","pubmedid":"36064775","details":"The micrographs are available in two versions, one raw and one with a high-pass filter of 40 Å (full width at half maximum).","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Nature methods","journal_abbreviation":"Nat Methods","issue":"9","preprint":false},{"authors":[{"name":"Lazić I","author_orcid":"0000-0001-5238-952X"},{"name":"Wirix M","author_orcid":"0000-0002-0463-1462"},{"name":"Leidl ML","author_orcid":"0000-0001-8896-1647"},{"name":"de Haas F","author_orcid":"0000-0002-4544-5156"},{"name":"Beckers M","author_orcid":"0000-0001-5988-1322"},{"name":"Pechnikova EV","author_orcid":"0000-0001-6142-2037"},{"name":"Müller-Caspary K","author_orcid":"0000-0002-2588-7993"},{"name":"Egoavil R","author_orcid":"0000-0003-3191-8132"},{"name":"Bosch EG","author_orcid":"0000-0002-6465-1879"},{"name":"Sachse C","author_orcid":"0000-0002-1168-5143"}],"editors":[{"name":" ","author_orcid":null}],"published":true,"j_or_nj_citation":true,"title":"Single-particle cryo-EM structures from iDPC-STEM at near-atomic resolution","volume":null,"country":"","first_page":null,"last_page":null,"year":"2021","language":"English","doi":"10.1101/2021.10.12.464113","pubmedid":null,"details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"bioRxiv","journal_abbreviation":"bioRxiv","issue":null,"preprint":true}],"dataset_size":"1.2 GB","experiment_type":"EMDB","scale":"molecule","related_pdb_entries":["7q2r"],"entry_doi":"10.6019/EMPIAR-11042"}}