{"EMPIAR-10829":{"imagesets":[{"segmentations":[],"name":"Reconstructed tomogram of Ca. M.lanthanidiphila cell","directory":"data/Mlanthanidiphila_tomo_09","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1452,"frames_per_image":9,"frame_range_min":null,"frame_range_max":null,"voxel_type":"SIGNED BYTE","pixel_width":2.63809,"pixel_height":2.63809,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Aquisition according to the parameters in the .mdoc file. Tilt angles (for missing wedge compensation) are in the .tilt file","image_width":"4092","image_height":"5760"},{"segmentations":[],"name":"Reconstructed tomogram of Ca. M.lanthanidiphila S-layer cell","directory":"data/Mlanthanidiphila_tomo_16","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1183,"frames_per_image":9,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":2.62631,"pixel_height":2.62631,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Aquisition according to the parameters in the .mdoc file. Tilt angles (for missing wedge compensation) are in the .tilt file","image_width":"4092","image_height":"5760"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"Cryo Electron Tomography of Ca.M.lanthanidiphila for subtomographic averaging of the S-layer","principal_investigator":[{"author_orcid":"0000-0002-2257-6364","middle_name":null,"organization":"Living Systems Institute, University of Exeter","street":"Stocker Road","town_or_city":"Exeter","state_or_province":null,"post_or_zip":"EX4 4QD","telephone":null,"fax":null,"first_name":"Lavinia","last_name":"Gambelli","email":"L.Gambelli [at] exeter.ac.uk","country":"United Kingdom","entry":"EMPIAR-10829"},{"author_orcid":"0000-0003-0877-3676","middle_name":null,"organization":"Microbial Cell Biology and Biochemistry, Dept. Microbiology, RIBES institute, Faculty of Science, Radboud University","street":"Heyenaalseweg 135","town_or_city":"Nijmegen","state_or_province":null,"post_or_zip":"6525 AJ","telephone":"+31 24 3652256","fax":null,"first_name":"Rob","last_name":"Mesman","email":"R.Mesman [at] science.ru.nl","country":"Netherlands","entry":"EMPIAR-10829"},{"author_orcid":"0000-0002-7011-7234","middle_name":null,"organization":"Microbial Cell Biology and Biochemistry, Dept. Microbiology, RIBES institute, Faculty of Science, Radboud University","street":"Heyenaalseweg 135","town_or_city":"Nijmegen","state_or_province":null,"post_or_zip":"6525 AJ","telephone":"+31 24 3652563","fax":null,"first_name":"Laura","last_name":"van Niftrik","email":"Laura.vanNiftrik [at] ru.nl","country":"Netherlands","entry":"EMPIAR-10829"}],"status":"REL","deposition_date":"2021-10-05","release_date":"2021-11-01","obsolete_date":null,"update_date":"2022-02-25","corresponding_author":{"author":{"author_orcid":"0000-0002-7011-7234","middle_name":null,"organization":"Microbial Cell Biology and Biochemistry, Dept. Microbiology, RIBES institute, Faculty of Science, Radboud University","street":"Heyenaalseweg 135","town_or_city":"Nijmegen","state_or_province":null,"post_or_zip":"6525 AJ","first_name":"Laura","last_name":"van Niftrik","country":"Netherlands"}},"authors":[{"author":{"name":"Gambelli L","author_orcid":"0000-0002-2257-6364"}},{"author":{"name":"Mesman R","author_orcid":"0000-0003-0877-3676"}},{"author":{"name":"Versantvoort W","author_orcid":"0000-0001-5418-2741"}},{"author":{"name":"Diebolder CA","author_orcid":null}},{"author":{"name":"Engel A","author_orcid":null}},{"author":{"name":"Evers W","author_orcid":null}},{"author":{"name":"Jetten MSM","author_orcid":null}},{"author":{"name":"Pabst M","author_orcid":null}},{"author":{"name":"Daum B","author_orcid":"0000-0002-3767-264X"}},{"author":{"name":"van Niftrik L","author_orcid":"0000-0002-7011-7234"}}],"cross_references":["EMD-13672"],"biostudies_references":[],"idr_references":[],"empiar_references":[{"name":"EMPIAR-10822"}],"citation":[{"authors":[{"name":"Gambelli L","author_orcid":"0000-0002-2257-6364"},{"name":"Mesman R","author_orcid":"0000-0003-0877-3676"},{"name":"Versantvoort W","author_orcid":"0000-0001-5418-2741"},{"name":"Diebolder CA","author_orcid":null},{"name":"Engel A","author_orcid":null},{"name":"Evers W","author_orcid":null},{"name":"Jetten MSM","author_orcid":null},{"name":"Pabst M","author_orcid":null},{"name":"Daum B","author_orcid":"0000-0002-3767-264X"},{"name":"van Niftrik L","author_orcid":"0000-0002-7011-7234"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"The Polygonal Cell Shape and Surface Protein Layer of Anaerobic Methane-Oxidizing <i>Methylomirabilis</i> <i>lanthanidiphila</i> Bacteria","volume":"12","country":"","first_page":null,"last_page":null,"year":"2021","language":"English","doi":"10.3389/fmicb.2021.766527","pubmedid":"34925275","details":"Tomograms were reconstructed from aligned movie frames (9 frames per tilt angle, exposure dose 0.163 e/A^2 per frame, total dose ~99.5 e/A^2 for the whole tilt-series) \nDetails on the acquisition can be found in the .mdoc file, tilt-angles are documented in the .tlt file.","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Frontiers in microbiology","journal_abbreviation":"Front Microbiol","issue":null,"preprint":false}],"dataset_size":"135.7 GB","experiment_type":"EMDB","scale":null,"entry_doi":"10.6019/EMPIAR-10829"}}