{"EMPIAR-10815":{"imagesets":[{"segmentations":[],"name":"Tomograms of mouse dorsal root ganglion axons (dataset 1) binned by 4 and deconvolved","directory":"data/bin4_deconvolved_tomos","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":30,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":13.76,"pixel_height":13.76,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Reconstructed bin4 tomograms. Volumes were filtered using the Wiener-like deconvolution filter implemented in WARP (Tegunov 2018, https://github.com/dtegunov/tom\\_deconv). Tomograms were reconstructed in IMOD by weighted back projection.","image_width":"927","image_height":"927"},{"segmentations":[],"name":"Corrected, aligned, dose-filtered and order-sorted tilt series for mouse dorsal root ganglion axons (dataset 1)","directory":"data/Dose-filt_stacks","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":30,"frames_per_image":61,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":3.44,"pixel_height":3.44,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Corrected, aligned, dose-filtered and sorted tilt series. The tilt series were generated from the raw frame images by correction for gain, defects and motion. In addition, tilt images were dose-filtered. Gain-correction and defects files are provided in the Raw_frames folder. Motion-correction was performed with alignframes (IMOD) operated in subTOM.","image_width":"3710","image_height":"3710"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"Cryo electron tomograms of mouse DRG axons (dataset 1)","principal_investigator":[{"author_orcid":"0000-0001-7292-5430","middle_name":null,"organization":"MRC Laboratory of Molecular Biology","street":"Cambridge Biomedical Campus, Francis Crick Ave,","town_or_city":"Cambridge","state_or_province":"Cambridgeshire","post_or_zip":"CB2 0QH","telephone":null,"fax":null,"first_name":"Andrew","last_name":"Carter","email":"cartera [at] mrc-lmb.cam.ac.uk","country":"United Kingdom","entry":"EMPIAR-10815"}],"status":"REL","deposition_date":"2021-07-28","release_date":"2021-12-17","obsolete_date":null,"update_date":"2021-12-17","corresponding_author":{"author":{"author_orcid":"0000-0002-4691-5746","middle_name":"Elizabeth","organization":"Human Technopole","street":"Viale Rita Levi‑Montalcini, 1","town_or_city":"Milan","state_or_province":null,"post_or_zip":"20157","first_name":"Helen","last_name":"Foster","country":"Italy"}},"authors":[{"author":{"name":"Foster HE","author_orcid":"0000-0002-4691-5746"}},{"author":{"name":"Ventura Santos C","author_orcid":"0000-0002-4406-5151"}},{"author":{"name":"Carter AP","author_orcid":"0000-0001-7292-5430"}}],"cross_references":["EMD-13602","EMD-13600","EMD-13601"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Foster HE","author_orcid":"0000-0002-4691-5746"},{"name":"Ventura Santos C","author_orcid":"0000-0002-4406-5151"},{"name":"Carter AP","author_orcid":"0000-0001-7292-5430"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"A cryo-ET survey of microtubules and intracellular compartments in mammalian axons","volume":"221","country":"United Kingdom","first_page":null,"last_page":null,"year":"2021","language":"English","doi":"10.1083/jcb.202103154","pubmedid":"34878519","details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Journal of Cell Biology","journal_abbreviation":"J. Cell Biol.","issue":"2","preprint":false}],"dataset_size":"200.8 GB","experiment_type":"EMDB","scale":null,"entry_doi":"10.6019/EMPIAR-10815"}}