{"EMPIAR-10702":{"imagesets":[{"segmentations":[],"name":"Reconstructed tomograms","directory":"data/materials/intermediate_files/tomograms","category":"reconstructed volumes","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":5,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.35,"pixel_height":1.35,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"All 5 reconstructed tomograms (using WBP and 2D-CTF correction) used in the publication. The corresponding raw tilt series can be found under the names TS_01, TS_03, TS_43, TS_45 and TS_54 in the EMPIAR entry 10164. These 5 tilt series were also used in Turonova et al, J Struct Biol. 2017 Sep;199(3):187-195. doi: 10.1016/j.jsb.2017.07.007.","image_width":"3838","image_height":"3710"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"Materials for step-by-step guide to efficient subtomogram averaging of virus-like particles with Dynamo","principal_investigator":[{"author_orcid":"0000-0002-0197-163X","middle_name":null,"organization":"BioEM Lab, Biozentrum, University of Basel, Basel, Switzerland","street":"Mattenstrasse 26","town_or_city":"Basel","state_or_province":null,"post_or_zip":"4058","telephone":null,"fax":null,"first_name":"Daniel","last_name":"Castaño-Díez","email":"daniel.castano [at] unibas.ch","country":"Switzerland","entry":"EMPIAR-10702"}],"status":"REL","deposition_date":"2021-04-26","release_date":"2021-08-25","obsolete_date":null,"update_date":"2022-04-05","corresponding_author":{"author":{"author_orcid":"0000-0002-0197-163X","middle_name":null,"organization":"BioEM Lab, Biozentrum, University of Basel, Basel, Switzerland","street":"Mattenstrasse 26","town_or_city":"Basel","state_or_province":null,"post_or_zip":"4058","first_name":"Daniel","last_name":"Castaño-Díez","country":"Switzerland"}},"authors":[{"author":{"name":"Scaramuzza S","author_orcid":"0000-0002-5856-5894"}},{"author":{"name":"Castaño-Díez D","author_orcid":"0000-0002-0197-163X"}}],"cross_references":[],"biostudies_references":[],"idr_references":[],"empiar_references":[{"name":"EMPIAR-10164"}],"citation":[{"authors":[{"name":"Scaramuzza S","author_orcid":"0000-0002-5856-5894"},{"name":"Castaño-Díez D","author_orcid":"0000-0002-0197-163X"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Step-by-step guide to efficient subtomogram averaging of virus-like particles with Dynamo","volume":"19","country":"","first_page":null,"last_page":null,"year":"2021","language":"English","doi":"10.1371/journal.pbio.3001318","pubmedid":"34437529","details":"Tomograms and materials used in protocol. They can be used to reproduce or to skip specific processing steps.\n\nIntermediate files: Contains the reconstructed tomograms and intermediate files that are used or generated during each processing step. Details about their usage in the publication. \n\nReproduce figures: Contains the exact data and commands to reproduce the figures in the publication.","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"PLoS biology","journal_abbreviation":"PLoS Biol","issue":"8","preprint":false}],"dataset_size":"645.2 GB","experiment_type":"Exception","scale":null,"entry_doi":"10.6019/EMPIAR-10702"}}