{"EMPIAR-10349":{"imagesets":[{"segmentations":[],"name":"82 tilt series (frames aligned my motioncorr2) in .st stacks (mrc format for imod) including .tlt, .xf and .defocus files","directory":"data/deposition_empiar","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":82,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":2.7,"pixel_height":2.7,"micrographs_file_pattern":"data/deposition_empiar/*st","picked_particles_file_pattern":"data/deposition_particles/*tbl","picked_particles_directory":"data/deposition_particles","details":"These are tilt series which we used for generation of the 12.6 A structure or RyR1 in native membranes. the notable repeating molecules also include ATP synthase and  a transporter SERCA. Details about the RYR1 structure can be found in the publication. Some tomograms have a higher exposure for the untilted micrograph which we use for \"hybrid StA\".\n\nThe particle folder contains 2547 unbinned CTF-corrected volumes which were used to generate the structure. The particles have not been exposure filtered. There is a Dynamo-style *.tbl which has metadata for the particles and the alignment parameters. Column 34 has class assignments for classification into 4 classes.","image_width":"3710","image_height":"3838"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"Cryo Electron Tomograms of Membrane Fractions of Rabbit Skeletal Muscle for Structural Determination of RyR1 in SR Vesicles","principal_investigator":[{"author_orcid":"0000-0003-3550-6274","middle_name":null,"organization":"Max Planck  Institute for Biophysics","street":"Max von Laue Strasse 3","town_or_city":"Frankfurt am Main","state_or_province":null,"post_or_zip":"60438","telephone":"41789410085","fax":null,"first_name":"Misha","last_name":"Kudryashev","email":"misha.kudryashev [at] gmail.com","country":"Germany","entry":"EMPIAR-10349"}],"status":"REL","deposition_date":"2020-01-21","release_date":"2020-03-20","obsolete_date":null,"update_date":"2020-01-23","corresponding_author":{"author":{"author_orcid":"0000-0003-3550-6274","middle_name":null,"organization":"Max Planck  Institute for Biophysics","street":"Max von Laue Strasse 3","town_or_city":"Frankfurt am Main","state_or_province":null,"post_or_zip":"60438","first_name":"Misha","last_name":"Kudryashev","country":"Germany"}},"authors":[{"author":{"name":"Chen W","author_orcid":"0000-0001-5730-5567"}},{"author":{"name":"Kudryashev M","author_orcid":"0000-0003-3550-6274"}}],"cross_references":["EMD-10643","EMD-10646","EMD-10640","EMD-10645","EMD-10639","EMD-10638","EMD-10637","EMD-10644","EMD-10641","EMD-10642"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Chen W","author_orcid":"0000-0001-5730-5567"},{"name":"Kudryashev M","author_orcid":"0000-0003-3550-6274"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Structure of RyR1 in native membranes","volume":null,"country":"Germany","first_page":null,"last_page":null,"year":"2020","language":"English","doi":"10.15252/embr.201949891","pubmedid":"32147968","details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"EMBO reports","journal_abbreviation":"EMBO Rep.","issue":null,"preprint":false}],"dataset_size":"254.2 GB","experiment_type":"EMDB","scale":null,"entry_doi":"10.6019/EMPIAR-10349"}}