{"EMPIAR-10236":{"imagesets":[{"segmentations":[],"name":"K2 tilt-series frames","directory":"data/frames","category":"micrographs - multiframe","header_format":"MRCS","data_format":"MRC","num_images_or_tilt_series":58,"frames_per_image":7,"frame_range_min":null,"frame_range_max":null,"voxel_type":"UNSIGNED 16 BIT INTEGER","pixel_width":1.84,"pixel_height":1.84,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"~8 e-/px/s dose rate on the camera\nGain and dark references included","image_width":"3710","image_height":"3838"},{"segmentations":[],"name":"Whole-frame aligned tilt images along with all other magnification images from the collection","directory":"data/leginon","category":"micrographs - single frame","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":58,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.84,"pixel_height":1.84,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Whole-frame aligned tilt images using Motioncor2.","image_width":"3710","image_height":"3838"},{"segmentations":[],"name":"Appion-Protomo tilt-series alignments","directory":"data/protomo_alignments","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":5,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":1.84,"pixel_height":1.84,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Includes a full tilt-series alignment run for each tilt-series.\nTo view properly, navigate to the protomo_alignments folder in Appion-Protomo.\nThe export/ directory contains SerialEM-formatted unaligned tilt-series stacks, mdoc files, and tilt files. This allows for easy upload to Appion-Protomo.","image_width":"3710","image_height":"3838"}],"workflow_file":null,"grant_references":[],"version_history":[],"title":"CryoET of cis-mutated mouse protocadherin gamma B6 on membranes","principal_investigator":[{"author_orcid":null,"middle_name":null,"organization":"Zuckerman Mind, Brain and Behavior Institute, Columbia University","street":"3227 Broadway","town_or_city":"New York","state_or_province":"New York","post_or_zip":"10027","telephone":null,"fax":null,"first_name":"Lawrence","last_name":"Shapiro","email":"lawrenceshapiro [at] gmail.com","country":"United States","entry":"EMPIAR-10236"}],"status":"REL","deposition_date":"2018-10-04","release_date":"2019-04-18","obsolete_date":null,"update_date":"2019-06-07","corresponding_author":{"author":{"author_orcid":null,"middle_name":null,"organization":"Zuckerman Mind, Brain and Behavior Institute, Columbia University","street":"3227 Broadway","town_or_city":"New York","state_or_province":"New York","post_or_zip":"10027","first_name":"Lawrence","last_name":"Shapiro","country":"United States"}},"authors":[{"author":{"name":"Brasch J","author_orcid":null}},{"author":{"name":"Bepler T","author_orcid":null}},{"author":{"name":"Berger B","author_orcid":"0000-0002-2724-7228"}},{"author":{"name":"Maniatis T","author_orcid":null}},{"author":{"name":"Potter CS","author_orcid":null}},{"author":{"name":"Carragher B","author_orcid":"0000-0002-0624-5020"}},{"author":{"name":"Honig B","author_orcid":"0000-0002-1835-1031"}},{"author":{"name":"Shapiro L","author_orcid":"0000-0001-9943-8819"}}],"cross_references":["EMD-9200"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Brasch J","author_orcid":null},{"name":"Goodman KM","author_orcid":"0000-0003-2063-5823"},{"name":"Noble AJ","author_orcid":"0000-0001-8634-2279"},{"name":"Mannepalli S","author_orcid":null},{"name":"Bahna F","author_orcid":null},{"name":"Rapp M","author_orcid":null},{"name":"Dandey VP","author_orcid":null},{"name":"Bepler T","author_orcid":null},{"name":"Berger B","author_orcid":"0000-0002-2724-7228"},{"name":"Maniatis T","author_orcid":null},{"name":"Potter CS","author_orcid":null},{"name":"Carragher B","author_orcid":"0000-0002-0624-5020"},{"name":"Honig B","author_orcid":"0000-0002-1835-1031"},{"name":"Shapiro L","author_orcid":"0000-0001-9943-8819"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Visualization of clustered protocadherin neuronal self-recognition complexes","volume":"569","country":"United States","first_page":"280","last_page":"283","year":"2019","language":"English","doi":"10.1038/s41586-019-1089-3","pubmedid":"30971825","details":"Includes raw frames, aligned micrographs using MotionCor2, naively summed micrographs, tilt-series for exemplar areas, aligned tilt-series for exemplar areas, and tomograms.","book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"Nature","journal_abbreviation":"Nature","issue":"7755","preprint":false}],"dataset_size":"379.7 GB","experiment_type":"EMDB","scale":null,"entry_doi":"10.6019/EMPIAR-10236"}}