{"EMPIAR-10141":{"imagesets":[{"segmentations":[],"name":"Tilt-series image stacks","directory":"data/SerialEM","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":3,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"SIGNED 16 BIT INTEGER","pixel_width":2.34,"pixel_height":2.34,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Not frame-aligned.\n.mdoc files included.","image_width":"3712","image_height":"4984"},{"segmentations":[],"name":"Appion-Protomo tilt-series alignments","directory":"data/protomo_alignments","category":"tilt series","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":3,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":2.34,"pixel_height":2.34,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Includes a full tilt-series alignment run for each tilt-series. To view properly, navigate to the protomo_alignments folder in Appion-Protomo.","image_width":"3712","image_height":"3838"},{"segmentations":[],"name":"Manual particle picking in Dynamo","directory":"data/manual_particle_picking","category":"picked particles - single frame - processed","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":1,"frames_per_image":1,"frame_range_min":null,"frame_range_max":null,"voxel_type":"32 BIT FLOAT","pixel_width":null,"pixel_height":null,"micrographs_file_pattern":"","picked_particles_file_pattern":"","picked_particles_directory":"","details":"Binned by 4 manual particle picking of the tomogram using Dynamo in TBL and OMD formats that relate to the corresponding .mrc file. Manual picking was performed to accurately distinguish between particles adsorbed to the air-water interfaces, non-adsorbed particles, and particles over or adsorbed to carbon.","image_width":null,"image_height":null}],"workflow_file":null,"grant_references":[],"version_history":[{"version_number":1,"date":"2018-04-05","status_code":"REL","details":"The depositor added tomography particle picks."}],"title":"CryoET of apoferritin with 0.5 mM TCEP single particle","principal_investigator":[{"author_orcid":"0000-0002-0624-5020","middle_name":null,"organization":"New York Structural Biology Center","street":"89 Convent Avenue","town_or_city":"New York","state_or_province":"NY","post_or_zip":"10027","telephone":null,"fax":null,"first_name":"Bridget","last_name":"Carragher","email":"bcarr [at] nysbc.org","country":"United States","entry":"EMPIAR-10141"}],"status":"REL","deposition_date":"2017-12-06","release_date":"2018-04-05","obsolete_date":null,"update_date":"2022-07-21","corresponding_author":{"author":{"author_orcid":"0000-0002-0624-5020","middle_name":null,"organization":"New York Structural Biology Center","street":"89 Convent Avenue","town_or_city":"New York","state_or_province":"NY","post_or_zip":"10027","first_name":"Bridget","last_name":"Carragher","country":"United States"}},"authors":[{"author":{"name":"Noble AJ","author_orcid":"0000-0001-8634-2279"}},{"author":{"name":"Dandey VP","author_orcid":null}},{"author":{"name":"Wei H","author_orcid":null}},{"author":{"name":"Brasch J","author_orcid":null}},{"author":{"name":"Chase J","author_orcid":null}},{"author":{"name":"Acharya P","author_orcid":null}},{"author":{"name":"Tan YZ","author_orcid":"0000-0001-6656-6320"}},{"author":{"name":"Zhang Z","author_orcid":null}},{"author":{"name":"Kim LY","author_orcid":null}},{"author":{"name":"Scapin G","author_orcid":null}},{"author":{"name":"Rapp M","author_orcid":null}},{"author":{"name":"Eng ET","author_orcid":"0000-0002-8014-7269"}},{"author":{"name":"Rice MJ","author_orcid":null}},{"author":{"name":"Cheng A","author_orcid":null}},{"author":{"name":"Negro CJ","author_orcid":null}},{"author":{"name":"Shapiro L","author_orcid":null}},{"author":{"name":"Kwong PD","author_orcid":null}},{"author":{"name":"Jeruzalmi D","author_orcid":null}},{"author":{"name":"des Georges A","author_orcid":null}},{"author":{"name":"Potter CS","author_orcid":null}},{"author":{"name":"Carragher B","author_orcid":"0000-0002-0624-5020"}}],"cross_references":["EMD-7150"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Noble AJ","author_orcid":"0000-0001-8634-2279"},{"name":"Dandey VP","author_orcid":null},{"name":"Wei H","author_orcid":null},{"name":"Brasch J","author_orcid":null},{"name":"Chase J","author_orcid":null},{"name":"Acharya P","author_orcid":null},{"name":"Tan YZ","author_orcid":"0000-0001-6656-6320"},{"name":"Zhang Z","author_orcid":null},{"name":"Kim LY","author_orcid":null},{"name":"Scapin G","author_orcid":null},{"name":"Rapp M","author_orcid":null},{"name":"Eng ET","author_orcid":"0000-0002-8014-7269"},{"name":"Rice WJ","author_orcid":null},{"name":"Cheng A","author_orcid":null},{"name":"Negro CJ","author_orcid":null},{"name":"Shapiro L","author_orcid":null},{"name":"Kwong PD","author_orcid":null},{"name":"Jeruzalmi D","author_orcid":"0000-0001-5886-1370"},{"name":"des Georges A","author_orcid":null},{"name":"Potter CS","author_orcid":"0000-0003-2394-0831"},{"name":"Carragher B","author_orcid":"0000-0002-0624-5020"}],"editors":[],"published":true,"j_or_nj_citation":true,"title":"Routine single particle CryoEM sample and grid characterization by tomography","volume":"7","country":"","first_page":null,"last_page":null,"year":"2018","language":"English","doi":"10.7554/elife.34257","pubmedid":"29809143","details":null,"book_chapter_title":null,"publisher":null,"publication_location":null,"journal":"eLife","journal_abbreviation":"Elife","issue":null,"preprint":false}],"dataset_size":"35.3 GB","experiment_type":"EMDB","scale":null,"entry_doi":"10.6019/EMPIAR-10141"}}