{"EMPIAR-10010":{"imagesets":[{"segmentations":[],"name":"Brome Mosaic Virus micrographs - non gain corrected","directory":"data/micrographs/non_gain_corrected","category":"micrographs - multiframe","header_format":"TIFF","data_format":"TIFF","num_images_or_tilt_series":424,"frames_per_image":37,"frame_range_min":1,"frame_range_max":37,"voxel_type":"UNSIGNED BYTE","pixel_width":0.99,"pixel_height":0.99,"micrographs_file_pattern":null,"picked_particles_file_pattern":null,"picked_particles_directory":null,"details":"Each frame is an individual TIFF image. The FinalImage.tif included for each micrograph is a sum image of the frames without drift correction and damage compensation. The .box files (found in the directory data/micrographs/non_gain_corrected/box_files)describe particle locations but are rotated 90 degrees relative to the micrograph frames.\nThe dark and gain correction images are found in data/micrographs/non_gain_corrected/gain_correction and are called:\ndark_frame.tif\ngain_frame.tif\nDataset is related to EMPIAR-10011.\nThis set is a subset of the images in data/micrographs/gain_corrected which were actually used in the final reconstruction.","image_width":"4096","image_height":"3072"},{"segmentations":[],"name":"Brome Mosaic Virus micrographs - gain corrected","directory":"data/micrographs/gain_corrected","category":"micrographs - multiframe","header_format":"MRC","data_format":"MRC","num_images_or_tilt_series":647,"frames_per_image":37,"frame_range_min":1,"frame_range_max":37,"voxel_type":"32 BIT FLOAT","pixel_width":0.99,"pixel_height":0.99,"micrographs_file_pattern":null,"picked_particles_file_pattern":null,"picked_particles_directory":null,"details":"These images have been gain corrected and are in MRC format. This is the full set of images collected for the project and includes those that were not finally used for image processing. data/micrographs/non_gain_corrected contains only the subset used in the reconstruction.","image_width":"4096","image_height":"3072"}],"workflow_file":null,"grant_references":[],"version_history":[{"version_number":1,"date":"2015-09-25","status_code":"REL","details":"Added dark and gain correction images:\ndark_frame.tif\ngain_frame.tif"},{"version_number":2,"date":"2015-11-11","status_code":"REL","details":"New gain corrected images uploaded.\nDirectory organization changed"}],"title":"Full virus map of Brome Mosaic Virus (micrographs and particle coordinates)","principal_investigator":[{"author_orcid":null,"middle_name":null,"organization":"National Center for Macromolecular Imaging, Baylor College of Medicine","street":null,"town_or_city":"Houston","state_or_province":null,"post_or_zip":"77030","telephone":null,"fax":null,"first_name":"Wah","last_name":"Chiu","email":"wah [at] bcm.edu","country":"United States","entry":"EMPIAR-10010"}],"status":"REL","deposition_date":"2014-07-20","release_date":"2014-09-07","obsolete_date":null,"update_date":"2014-09-07","corresponding_author":{"author":{"author_orcid":null,"middle_name":null,"organization":"National Center for Macromolecular Imaging, Baylor College of Medicine","street":null,"town_or_city":"Houston","state_or_province":null,"post_or_zip":"77030","first_name":"Zhao","last_name":"Wang","country":"United States"}},"authors":[{"author":{"name":"Wang Z","author_orcid":null}},{"author":{"name":"Hryc C","author_orcid":null}},{"author":{"name":"Bammes B","author_orcid":null}},{"author":{"name":"Afonine P","author_orcid":null}},{"author":{"name":"Jakana J","author_orcid":null}},{"author":{"name":"Chen DH","author_orcid":null}},{"author":{"name":"Liu XA","author_orcid":null}},{"author":{"name":"Baker M","author_orcid":null}},{"author":{"name":"Kao C","author_orcid":null}},{"author":{"name":"Ludtke S","author_orcid":null}},{"author":{"name":"Schmid M","author_orcid":null}},{"author":{"name":"Adams P","author_orcid":null}},{"author":{"name":"Chiu W","author_orcid":null}}],"cross_references":["EMD-6000"],"biostudies_references":[],"idr_references":[],"empiar_references":[],"citation":[{"authors":[{"name":"Wang Z","author_orcid":null},{"name":"Hryc CF","author_orcid":null},{"name":"Bammes B","author_orcid":null},{"name":"Afonine PV","author_orcid":null},{"name":"Jakana J","author_orcid":null},{"name":"Chen DH","author_orcid":null},{"name":"Liu X","author_orcid":null},{"name":"Baker ML","author_orcid":null},{"name":"Kao C","author_orcid":null},{"name":"Ludtke SJ","author_orcid":null},{"name":"Schmid MF","author_orcid":null},{"name":"Adams PD","author_orcid":null},{"name":"Chiu W","author_orcid":null}],"editors":[],"published":null,"j_or_nj_citation":true,"title":"An atomic model of brome mosaic virus using direct electron detection and real-space optimization","volume":"5","first_page":"4808","last_page":"4808","year":"2014","language":null,"doi":"doi:10.1038/ncomms5808","pubmedid":"25185801","details":null,"journal":"Nat Commun","issue":""}],"dataset_size":"1.7 TB","experiment_type":"EMDB","scale":null,"related_pdb_entries":["3j7l","3j7m","3j7n"],"entry_doi":"10.6019/EMPIAR-10010"}}