Electron Microscopy Data Bank

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natural_source_ncbi_code:"10090"

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EMD-29589

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Mouse apoferritin from data collected on Talos Arctica microscope equipped with a K3 camera operating in super resolution mode, in 0-50 nm ice thickness

Release date: March 22, 2023
Resolution: 2.61 Å
EM Method: Single-particle

Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD

J Struct Biol X (2023) 7 pp. 100085-100085 [ DOI: doi:10.1016/j.yjsbx.2023.100085 Pubmed: 36742017 ]

Sample:

Apoferritin (450 kDa, Complex from Mus musculus)

EMD-29591

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Mouse apoferritin from data collected on Talos Arctica microscope equipped with a K3 camera operating in super resolution mode, in 50-100 nm ice thickness

Release date: March 22, 2023
Resolution: 2.78 Å
EM Method: Single-particle

Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD

J Struct Biol X (2023) 7 pp. 100085-100085 [ DOI: doi:10.1016/j.yjsbx.2023.100085 Pubmed: 36742017 ]

Sample:

Apoferritin (450 kDa, Complex from Mus musculus)

EMD-29592

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Mouse apoferritin from data collected on Talos Arctica microscope equipped with a K3 camera operating in super resolution mode, in 100-150 nm ice thickness

Release date: March 22, 2023
Resolution: 3.04 Å
EM Method: Single-particle

Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD

J Struct Biol X (2023) 7 pp. 100085-100085 [ DOI: doi:10.1016/j.yjsbx.2023.100085 Pubmed: 36742017 ]

Sample:

Apoferritin (450 kDa, Complex from Mus musculus)

EMD-29593

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Mouse apoferritin from data collected on Talos Arctica microscope equipped with a K3 camera operating in super resolution mode, in 150-200 nm ice thickness

Release date: March 22, 2023
Resolution: 4.11 Å
EM Method: Single-particle

Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD

J Struct Biol X (2023) 7 pp. 100085-100085 [ DOI: doi:10.1016/j.yjsbx.2023.100085 Pubmed: 36742017 ]

Sample:

Apoferritin (450 kDa, Complex from Mus musculus)

EMD-29594

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Mouse apoferritin from data collected on Talos Arctica microscope equipped with a K3 camera operating in super resolution mode, in 200-500 nm ice thickness

Release date: March 22, 2023
Resolution: 8.82 Å
EM Method: Single-particle

Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD

J Struct Biol X (2023) 7 pp. 100085-100085 [ DOI: doi:10.1016/j.yjsbx.2023.100085 Pubmed: 36742017 ]

Sample:

Apoferritin (450 kDa, Complex from Mus musculus)

EMD-33984

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Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi

Release date: March 22, 2023
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 7yon

Kang H, Park C, Choi YK, Bae J, Kwon S, Kim J, Choi C, Seok C, Im W, Choi HJ

Structure (2023) 31 pp. 44-57.e6 [ Pubmed: 36525977 DOI: doi:10.1016/j.str.2022.11.010 ]

Sample:

Guanine nucleotide-binding protein (Complex)
Single-chain antibody fv fragment (scfv16) (27 kDa, Protein from Mus musculus)
Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
Pyy(3-36) (Complex)
Neuropeptide y receptor type 2 (43 kDa, Protein from Homo sapiens)
Peptide yy(3-36) (4 kDa, Protein from Homo sapiens)
Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
Water (18 Da, Ligand)
Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
Complex structure of pyy(3-36)-y2r-gi-scfv16 (Complex from Homo sapiens)
Scfv16 (Complex from Mus musculus)

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EMD-33985

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Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi

Release date: March 22, 2023
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 7yoo

Kang H, Park C, Choi YK, Bae J, Kwon S, Kim J, Choi C, Seok C, Im W, Choi HJ

Structure (2023) 31 pp. 44-57.e6 [ Pubmed: 36525977 DOI: doi:10.1016/j.str.2022.11.010 ]

Sample:

Single-chain antibody fv fragment (scfv16) (27 kDa, Protein from Mus musculus)
Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
Scfv16 (Complex)
Guanine nucleotide-binding protein (Complex from Mus musculus)
Npy (Complex)
Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
Complex structure of npy-y2r-gi-scfv16 (Complex from Homo sapiens)
Neuropeptide y receptor type 2 (43 kDa, Protein from Homo sapiens)
Neuropeptide y (4 kDa, Protein from Homo sapiens)

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EMD-34619

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Cryo-EM structure of IRL1620-bound ETBR-Gi complex

Release date: March 22, 2023
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8hbd
Q-score: 0.412

Yuan Q, Ji Y, Jiang Y, Duan J, Xu HE

To Be Published

Sample:

Irl1620-bound etbr-gi complex (Complex from Homo sapiens)
Irl1620 (1 kDa, Protein from Homo sapiens)
Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
Endothelin receptor type b,endothelin receptor type b,oplophorus-luciferin 2-monooxygenase catalytic subunit chimera (67 kDa, Protein from Homo sapiens)
Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
Scfv16 (30 kDa, Protein from Mus musculus)
Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Homo sapiens)

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EMD-34663

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Cryo-EM structure of endothelin1-bound ETAR-Gq complex

Release date: March 22, 2023
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 8hcq
Q-score: 0.394

Yuan Q, Jiang Y, Xu HE, Ji Y, Duan J

To Be Published

Sample:

Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
Guanine nucleotide-binding protein g(q) subunit alpha-1 (28 kDa, Protein from Homo sapiens)
Et1-etar-gq-scfv16 complex (Complex from Homo)
Scfv16 (30 kDa, Protein from Mus musculus)
Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Homo sapiens)
Endothelin-1 (2 kDa, Protein from Homo sapiens)
Endothelin-1 receptor,oplophorus-luciferin 2-monooxygenase catalytic subunit chimera (69 kDa, Protein from Homo sapiens)

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EMD-34667

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Cryo-EM structure of Endothelin1-bound ETBR-Gq complex

Release date: March 22, 2023
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8hcx
Q-score: 0.346

Yuan Q, Jiang Y, Xu HE, Ji Y, Duan J

To Be Published

Sample:

Endothelin receptor type b,oplophorus-luciferin 2-monooxygenase catalytic subunit chimera (67 kDa, Protein from Homo sapiens)
Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
Guanine nucleotide-binding protein g(q) subunit alpha-1 (28 kDa, Protein from Homo sapiens)
Et1-etar-gq-scfv16 complex (Complex from Homo)
Scfv16 (30 kDa, Protein from Mus musculus)
Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (41 kDa, Protein from Homo sapiens)
Endothelin-1 (2 kDa, Protein from Homo sapiens)

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