Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like membrane environment, MSP1D1 nanodisc
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8eqj
Q-score: 0.505
Miller AN, Houlihan PR, Matamala E, Cabezas-Bratesco D, Lee GY, Cristofori-Armstrong B, Dilan TL, Sanchez-Martinez S, Matthies D, Yan R, Yu Z, Ren D, Brauchi SE, Clapham DE
eLife (2023) 12 [ Pubmed: 36695574 DOI: doi:10.7554/eLife.84477 ]
- Orf3a protein (36 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Structure of sars-cov-2 orf3a in late endosome/lysosome-like membrane environment, msp1d1 nanodisc (Complex from Severe acute respiratory syndrome coronavirus 2)
Structure of SARS-CoV-1 Orf3a in late endosome/lysosome-like environment, MSP1D1 nanodisc
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8eqs
Q-score: 0.475
Miller AN, Houlihan PR, Matamala E, Cabezas-Bratesco D, Lee GY, Cristofori-Armstrong B, Dilan TL, Sanchez-Martinez S, Matthies D, Yan R, Yu Z, Ren D, Brauchi SE, Clapham DE
eLife (2023) 12 [ Pubmed: 36695574 DOI: doi:10.7554/eLife.84477 ]
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Apolipoprotein a-i (24 kDa, Protein from Homo sapiens)
- Orf3a protein (36 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Structure of sars-cov-1 orf3a in late endosome/lysosome-like environment, msp1d1 nanodisc (Complex from Homo sapiens)
Structure of SARS-CoV-2 Orf3a in plasma membrane-like environment, MSP1D1 nanodisc
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8eqt
Q-score: 0.452
Miller AN, Houlihan PR, Matamala E, Cabezas-Bratesco D, Lee GY, Cristofori-Armstrong B, Dilan TL, Sanchez-Martinez S, Matthies D, Yan R, Yu Z, Ren D, Brauchi SE, Clapham DE
eLife (2023) 12 [ Pubmed: 36695574 DOI: doi:10.7554/eLife.84477 ]
Structure of SARS-CoV-2 Orf3a in late endosome/lysosome-like environment, Saposin A nanodisc
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8equ
Q-score: 0.422
Miller AN, Houlihan PR, Matamala E, Cabezas-Bratesco D, Lee GY, Cristofori-Armstrong B, Dilan TL, Sanchez-Martinez S, Matthies D, Yan R, Yu Z, Ren D, Brauchi SE, Clapham DE
eLife (2023) 12 [ Pubmed: 36695574 DOI: doi:10.7554/eLife.84477 ]
- Saposin-a (11 kDa, Protein from Homo sapiens)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Orf3a protein (36 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Structure of sars-cov-2 orf3a in late endosome/lysosome-like environment, saposin a nanodisc (Complex from Severe acute respiratory syndrome coronavirus 2)
- Saposin a, polyalanine model (6 kDa, Protein from Homo sapiens)
CryoET tilt series of mouse sperm flagella after FIB-SEM milling
Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Yu Z, Lishko PV, Agard DA, Vale RD
Nat Struct Mol Biol (2023) [ Pubmed: 36593309 DOI: 10.1038/s41594-022-00861-0 ]
Image sets:
96-nm repeat unit of microtubule doublet from mouse sperm
Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Yu Z, Lishko PV, Agard DA, Vale RD
Nat Struct Mol Biol (2023) 30 pp. 360-369 [ Pubmed: 36593309 DOI: doi:10.1038/s41594-022-00861-0 ]
32-nm repeating structure of central pair complex from mouse sperm
Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Yu Z, Lishko PV, Agard DA, Vale RD
Nat Struct Mol Biol (2023) 30 pp. 360-369 [ Pubmed: 36593309 DOI: doi:10.1038/s41594-022-00861-0 ]
- Microtubule doublet from mouse sperm (30 MDa, Complex from Mus musculus)
96-nm repeating structure of microtubule doublet 1 from mouse sperm
Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Yu Z, Lishko PV, Agard DA, Vale RD
Nat Struct Mol Biol (2023) 30 pp. 360-369 [ Pubmed: 36593309 DOI: doi:10.1038/s41594-022-00861-0 ]
- Microtubule doublet from mouse sperm (30 MDa, Complex from Mus musculus)
96-nm repeating structure of microtubule doublet 2 from mouse sperm
Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Yu Z, Lishko PV, Agard DA, Vale RD
Nat Struct Mol Biol (2023) 30 pp. 360-369 [ Pubmed: 36593309 DOI: doi:10.1038/s41594-022-00861-0 ]
- Microtubule doublet from mouse sperm (30 MDa, Complex from Mus musculus)
96-nm repeating structure of microtubule doublet 3 from mouse sperm
Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Yu Z, Lishko PV, Agard DA, Vale RD
Nat Struct Mol Biol (2023) 30 pp. 360-369 [ Pubmed: 36593309 DOI: doi:10.1038/s41594-022-00861-0 ]
- Microtubule doublet from mouse sperm (30 MDa, Complex from Mus musculus)