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(spliceosome OR ribonucleoprotein) AND NOT human
Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30
Release date: March 13, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8scz
Q-score: 0.386
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8scz
Q-score: 0.386
To Be Published
Sample:
- Antiviral innate immune response receptor rig-i (101 kDa, Protein from Homo sapiens)
- P3slr30 (20 kDa, RNA from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Cryo-em structure of 14aa-gs rig-i in complex with p3slr30 (Complex from Homo sapiens)
Cryo-EM structure of RIG-I in complex with p3SLR14
Release date: March 13, 2024
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8sd0
Q-score: 0.425
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8sd0
Q-score: 0.425
To Be Published
Sample:
- Cryo-em structure of rig-i in complex with p3slr14 (Complex from Homo sapiens)
- P3slr14 (10 kDa, RNA from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Antiviral innate immune response receptor rig-i (106 kDa, Protein from Homo sapiens)
Cryo-EM reconstruction of the influenza A virus helical ribonucleoprotein-like
Chenavier F, Estrozi LF, Teulon JM, Zarkadas E, Freslon LL, Pellequer JL, Ruigrok RWH, Schoehn G, Ballandras-Colas A, Crépin T
Sci Adv (2023) 9 [ DOI: 10.1126/sciadv.adj9974 Pubmed: 38100595 ]
Image sets:
Yeast 40S-eIF4B - partially open conformation of the 40S head
Release date: Feb. 7, 2024
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 8i7j
Q-score: 0.316
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 8i7j
Q-score: 0.316
To Be Published
Sample:
- Klla0b01474p (15 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0b07931p (14 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s24 (15 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Ubiquitin-40s ribosomal protein s27a (17 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s14 (14 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s16 (15 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0f07843p (15 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0a10483p (17 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Rna (1780-mer) (579 kDa, RNA from Kluyveromyces lactis NRRL Y-1140)
- Klla0b08173p (12 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- The binary complex of the yeast 40s small ribosomal subunit with the eukaryotic initiation factor 4b. (Complex from Saccharomyces cerevisiae S288c)
- 40s ribosomal protein s21 (9 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s1 (28 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s28 (7 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s27 (8 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s8 (22 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0d10659p (25 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 60s ribosomal protein l41-a (3 kDa, Protein from Saccharomyces cerevisiae S288C)
- Klla0b11231p (16 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Yeast 40s small ribosomal subunit (Complex)
- 40s ribosomal protein s30 (7 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s0 (28 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0f25542p (13 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0e12277p (35 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s4 (29 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0b01562p (17 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s25 (12 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s6 (26 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s7 (21 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Eukaryotic initiation factor 4b (eif4b). (Complex from Kluyveromyces lactis Saccharomyces cerevisiae S288c)
- Zinc ion (65 Da, Ligand)
- Klla0f18040p (16 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s12 (14 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0e23673p (21 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s29 (6 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0d08305p (26 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- 40s ribosomal protein s26 (13 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Magnesium ion (24 Da, Ligand)
- Klla0f09812p (27 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
- Klla0a07194p (15 kDa, Protein from Kluyveromyces lactis NRRL Y-1140)
Release date: Feb. 7, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8v9j
Q-score: 0.525
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8v9j
Q-score: 0.525
Helena-Bueno K, Rybak MY, Ekemezie CL, Sullivan R, Brown CR, Dingwall C, Basle A, Schneider C, Connolly JPR, Blaza JN, Csorgo B, Moynihan PJ, Gagnon MG, Hill CH, Melnikov SV
Nature (2024) 626 pp. 1125-1132 [ DOI: doi:10.1038/s41586-024-07041-8 Pubmed: 38355796 ]
Sample:
- 50s ribosomal protein l20 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s4 (23 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s15 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s10 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s19 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l27 (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Pe/e deacylated phenylanaline-trna (24 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l28 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l9 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l36 (4 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Poly-u mrna (873 Da, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l14 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l17 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s12 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s11 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l23 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l6 (19 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l24 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s2 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l15 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l35 (7 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l3 (23 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s5 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l4 (22 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l19 (12 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s17 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l11 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l33 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s9 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s22 (4 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Ribosome hibernation factor balon (msmeg_1130) (41 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 16s ribosomal rna (495 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l2 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l13 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l31 (8 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s13 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l22 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l30 (7 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s14 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 23s ribosomal rna (1 MDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 5s ribosomal rna (38 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s20 (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l16 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l25 (22 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s3 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s7 (17 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l5 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s6 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l10 (18 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s8 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l01 (25 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l37 (2 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l18 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l29 (8 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l34 (5 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l32 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s18 (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l21 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s16 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Cryo-em structure of the mycobacterium smegmatis 70s ribosome in complex with hibernation factor msmeg1130 (balon) (structure 4) (2 MDa, Complex from Mycolicibacterium smegmatis MC2 155)
Release date: Feb. 7, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8v9k
Q-score: 0.461
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8v9k
Q-score: 0.461
Helena-Bueno K, Rybak MY, Ekemezie CL, Sullivan R, Brown CR, Dingwall C, Basle A, Schneider C, Connolly JPR, Blaza JN, Csorgo B, Moynihan PJ, Gagnon MG, Hill CH, Melnikov SV
Nature (2024) 626 pp. 1125-1132 [ DOI: doi:10.1038/s41586-024-07041-8 Pubmed: 38355796 ]
Sample:
- Large ribosomal subunit protein ul23 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l27 (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s4 (23 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s19 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s10 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l36 (4 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Pe/e deacylated phenylanaline-trna (24 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l9 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl28 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Poly-u mrna (873 Da, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l14 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l17 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s12 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s11 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl20 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l6 (19 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s2 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l15 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l3 (23 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l35 (7 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us5 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l19 (12 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s17 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul5 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us14b (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul16 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l11 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s9 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul1 (25 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s22 (4 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 16s ribosomal rna (495 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l2 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s13 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l30 (7 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 23s ribosomal rna (1 MDa, RNA from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein bs18b (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 5s ribosomal rna (38 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s20 (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l25 (22 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Cryo-em structure of the mycobacterium smegmatis 70s ribosome in complex with hibernation factor rv2629 (balon) (structure 5) (2 MDa, Complex from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s3 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s7 (17 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s6 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Ribosome hibernation factor balon (rv2629) (40 kDa, Protein from Mycobacterium tuberculosis H37Rv)
- 50s ribosomal protein l10 (18 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl31 (8 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l37 (2 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul22 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l29 (8 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l32 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l34 (5 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl33a (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s16 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l24 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
Release date: Feb. 7, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8v9l
Q-score: 0.527
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8v9l
Q-score: 0.527
Helena-Bueno K, Rybak MY, Ekemezie CL, Sullivan R, Brown CR, Dingwall C, Basle A, Schneider C, Connolly JPR, Blaza JN, Csorgo B, Moynihan PJ, Gagnon MG, Hill CH, Melnikov SV
Nature (2024) 626 pp. 1125-1132 [ DOI: doi:10.1038/s41586-024-07041-8 Pubmed: 38355796 ]
Sample:
- Large ribosomal subunit protein ul23 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l27 (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s4 (23 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s19 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s10 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Poly-u mrna (1 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l36 (4 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Pe/e deacylated phenylanaline-trna (24 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l9 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl28 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l14 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul4 (22 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l17 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s12 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s11 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul13 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl20 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l6 (19 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s2 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l15 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us8 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l3 (23 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l35 (7 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us5 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl21 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l19 (12 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 30s ribosomal protein s17 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul5 (21 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us14b (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul16 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l27 (2 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l11 (15 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s9 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s22 (4 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Ribosome hibernation factor balon (msmeg_1130) (41 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 16s ribosomal rna (495 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l2 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s13 (14 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l30 (7 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 23s ribosomal rna (1 MDa, RNA from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein bs18b (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 5s ribosomal rna (38 kDa, RNA from Mycolicibacterium smegmatis MC2 155)
- Zinc ion (65 Da, Ligand)
- Cryo-em structure of the mycobacterium smegmatis 70s ribosome in complex with hibernation factor msmeg1130 (balon) and msmegef-tu(gdp) (composite structure 6) (2 MDa, Complex from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s20 (9 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l25 (22 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s3 (30 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s7 (17 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Elongation factor tu (43 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s6 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l10 (18 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl31 (8 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul18 (13 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein ul22 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Small ribosomal subunit protein us15 (10 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l29 (8 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l32 (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l34 (5 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Large ribosomal subunit protein bl33a (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 30s ribosomal protein s16 (16 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- 50s ribosomal protein l24 (11 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
60S subunit of the Giardia lamblia 80S ribosome
Release date: Jan. 31, 2024
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 8fru
Q-score: 0.648
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 8fru
Q-score: 0.648
Eiler DR, Wimberly BT, Bilodeau DY, Taliaferro JM, Reigan P, Rissland OS, Kieft JS
Structure (2024) 32 pp. 400- [ Pubmed: 38242118 DOI: doi:10.1016/j.str.2023.12.015 ]
Sample:
- 60s ribosomal protein el43 (10 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el40 (14 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul14 (15 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul6 (20 kDa, Protein from Giardia intestinalis assemblage A)
- 28s rrna (871 kDa, RNA from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul23 (16 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el42 (12 kDa, Protein from Giardia intestinalis assemblage A)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein el38 (8 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el19 (23 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul15 (17 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal subunit of the 80s giardia intestinalis assemblage a ribosome (Complex from Giardia intestinalis assemblage A)
- 60s ribosomal protein el37 (11 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el39 (6 kDa, Protein from Giardia intestinalis assemblage A)
- 5s rrna (38 kDa, RNA from Giardia intestinalis assemblage A)
- 60s ribosomal protein el24 (12 kDa, Protein from Giardia intestinalis assemblage A)
- Spermidine (145 Da, Ligand)
- 60s ribosomal protein el8 (25 kDa, Protein from Giardia intestinalis assemblage A)
- Water (18 Da, Ligand)
- 60s ribosomal protein ul5 (19 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el22 (19 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el13 (26 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el14 (14 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el15 (24 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el20 (24 kDa, Protein from Giardia intestinalis assemblage A)
- 5.8s rrna (45 kDa, RNA from Giardia intestinalis assemblage A)
- 60s ribosomal protein el18 (20 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el30 (11 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el34 (13 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul24 (15 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el29 (7 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul18 (33 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul22 (18 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el36 (10 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul16 (24 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul3 (42 kDa, Protein from Giardia intestinalis assemblage A)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein ul2 (27 kDa, Protein from Giardia intestinalis assemblage A)
- Potassium ion (39 Da, Ligand)
- 60s ribosomal protein el31 (12 kDa, Protein from Giardia intestinalis assemblage A)
- Sodium ion (22 Da, Ligand)
- 60s ribosomal protein el33 (13 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul30 (27 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el21 (18 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el41 (2 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul29 (14 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el27 (15 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein el32 (15 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul4 (35 kDa, Protein from Giardia intestinalis assemblage A)
- 60s ribosomal protein ul13 (22 kDa, Protein from Giardia intestinalis assemblage A)