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sample_name:"Tobacco mosaic virus"

Filter By

Current Database

  • EMDB [40]

Current status

  • REL [40]

Sample type

  • Virus [31]
  • Protein [15]
  • Sample [14]
  • RNA [9]
  • Complex [8]
  • Ligand [2]

Organism

  • Tobacco mosaic virus [29]
  • Tobacco mosaic virus [9]
  • Nicotiana tabacum [4]
  • 12246 [1]

EM Method

  • Helical reconstruction [30]
  • Single-particle [8]
  • Subtomogram averaging [1]
  • Tomography [1]

Resolution

  • < 2Å [5]
  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [16]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 0-50 kDa [2]
  • 250-500 kDa [1]
  • 500-1000 kDa [10]

Release Date

  • 2026 [3]
  • 2025 [4]
  • 2024 [3]
  • 2023 [2]
  • 2022 [7]
  • 2021 [2]
  • 2020 [1]
  • 2019 [4]
  • 2015 [1]
  • 2014 [10]
  • 2011 [1]
  • 2010 [1]
  • 2007 [1]

Author by name

  • Sachse C [20]
  • Jakobi AJ [12]
  • Bharat TA [10]
  • Bharat TAM [10]
  • Fromm SA [10]
  • Hagen WJ [10]
  • Hagen WJH [10]
  • Beckers M [7]
  • Leidl ML [6]
  • Mann D [6]
  • Muller-caspary K [6]
  • Bosch EGT [5]
  • Egoavil R [5]
  • Lazic I [5]
  • Mohammed I [5]
  • Pechnikova EV [5]
  • Stahlberg H [5]
  • Wirix M [5]
  • De Haas F [5]
  • Abu-baker I [4]
  • Al-feghali A [4]
  • Biela AP [4]
  • Blum AS [4]
  • Cosa G [4]
  • De Feyter S [4]
  • Heddle JG [4]
  • Radecke J [4]
  • Velpula G [4]
  • Weis F [4]
  • Zolfaghar E [4]
  • Chinmaya KV [3]
  • Evers WH [2]
  • Ferreira RC [2]
  • Fotiadis D [2]
  • Grigorieff N [2]
  • Harder D [2]
  • Huber ST [2]
  • Huijink R [2]
  • Kube M [2]
  • Kumar V [2]
  • Sarajlic E [2]
  • Von Der Hocht I [2]
  • Albiez S [1]
  • Beulen BWAMM [1]
  • Bhella D [1]
  • Bisikalo K [1]
  • Bobe D [1]
  • Bottcher B [1]
  • Braun T [1]
  • Bukharova T [1]
  • Burton-smith RN [1]
  • Butcher SJ [1]
  • Chen JZ [1]
  • Chen W [1]
  • Clare DK [1]
  • Coureux PD [1]
  • Di Fabrizio M [1]
  • Dietrich L [1]
  • Dobias F [1]
  • Domanska A [1]
  • Dong J [1]
  • Effantin G [1]
  • Ekundayo B [1]
  • Eng ET [1]
  • Fandrich M [1]
  • Filopoulou A [1]
  • Flegler V [1]
  • Flegler VJ [1]
  • Flot D [1]
  • Ge P [1]
  • Giraud T [1]
  • Gonzalez B [1]
  • Grininger M [1]
  • Guerrero-ferreira RC [1]
  • Henderikx RJM [1]
  • Hons M [1]
  • Jiang W [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Kovacik L [1]
  • Kucukoglu B [1]
  • Kudryashev M [1]
  • Laanto E [1]
  • Lak B [1]
  • Lau K [1]
  • Lenhart J [1]
  • Leonard GA [1]
  • Love AJ [1]
  • Ludig D [1]
  • Makbul C [1]
  • Mcgeachy K [1]
  • Miller J [1]
  • Momoh J [1]
  • Mueller-dieckmann C [1]
  • Murata K [1]
  • Myasnikov A [1]
  • Nazarov S [1]
  • Oksanen HM [1]
  • Oliva P [1]
  • Ophus C [1]

Author by ORCID

  • Sachse C [17]
  • Jakobi AJ [10]
  • Hagen WJ [8]
  • Bharat TA [8]
  • Fromm SA [8]
  • Beckers M [7]
  • Leidl ML [6]
  • Mann D [6]
  • Lazic I [5]
  • Biela AP [4]
  • Blum AS [4]
  • Abu-baker I [4]
  • Velpula G [4]
  • De Feyter S [4]
  • Weis F [4]
  • Cosa G [4]
  • Heddle JG [4]
  • Al-feghali A [4]
  • Von Der Hocht I [2]
  • Stahlberg H [2]
  • Grigorieff N [2]
  • Evers WH [2]
  • Huber ST [2]
  • Leonard GA [1]
  • Butcher SJ [1]
  • Sun C [1]
  • Mohammed I [1]
  • Varnavides G [1]
  • Filopoulou A [1]
  • Ludig D [1]
  • Miller J [1]
  • Williams PA [1]
  • Jiang W [1]
  • Schoehn G [1]
  • Muller-caspary K [1]
  • Ge P [1]
  • Peters PJ [1]
  • Clare DK [1]
  • Guerrero-ferreira RC [1]
  • Domanska A [1]
  • Stroupe ME [1]
  • Zhang Y [1]
  • Svensson O [1]
  • Effantin G [1]
  • Bobe D [1]
  • Bisikalo K [1]
  • Bottcher B [1]
  • Eng ET [1]
  • Hons M [1]
  • Lau K [1]
  • Braun T [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Rasmussen T [1]
  • Chinmaya KV [1]
  • Di Fabrizio M [1]
  • Ekundayo B [1]
  • Kube M [1]
  • Mohammed I [1]
  • Radecke J [1]
  • Stahlberg H [1]
  • Ophus C [1]
  • Myasnikov A [1]
  • Oksanen HM [1]
  • Orlova EV [1]
  • Kudryashev M [1]
  • Mueller-dieckmann C [1]

Journal

  • J STRUCT BIOL [12]
  • TO BE PUBLISHED [6]
  • NAT METHODS [5]
  • SMALL [4]
  • BIORXIV [3]
  • ACTA CRYSTALLOGR D STRUCT BIOL [2]
  • ELIFE [2]
  • EMBO REP [2]
  • J MOL BIOL [2]
  • NAT COMMUN [2]
  • PNAS [2]
  • ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
  • SCI REP [1]
  • ULTRAMICROSCOPY [1]

Software

  • RELION [14]
  • SPRING [12]
  • CRYOSPARC [9]
  • CHIMERA AND COOT [1]
  • CTFFIND [1]
  • FREALIX [1]
  • IHRSR, EMAN [1]
  • IMOD [1]
  • SPIDER [1]
  • SPIDER, IMAGIC [1]
  • XPLOR [1]

Microscope

  • FEI TITAN KRIOS [26]
  • TFS KRIOS [8]
  • FEI TECNAI F30 [2]
  • JEOL 3200FSC [2]
  • FEI POLARA 300 [1]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [40]

Film or detector model

  • FEI FALCON II 4K X 4K [9]
  • OTHER [6]
  • GATAN K2 SUMMIT 4K X 4K [5]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • KODAK SO-163 FILM [3]
  • DECTRIS ELA 1K X 0.5K [1]
  • DIRECT ELECTRON APOLLO 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [40]
  • EMPIAR [18]
  • UniProt [15]
  • PDBe-Kb [14]
  • Gene Ontology [8]
  • InterPro [8]
  • Pfam [8]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]
  • CATH [1]
Sort by: Download
Showing 1 - 10 of 40. Page 1 of 4
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Preview first 10
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EMD-57762
Download Map
3D View
TMV Map using Pulsed Illumination
CryoEM
Release date: May 6, 2026
Resolution: 5.62 Å
EM Method: Single-particle

Kumar V, Radecke J, Chinmaya KV, Mohammed I, Ferreira RC, Harder D, Fotiadis D, Stahlberg H

To Be Published

EMD-57764
Download Map
3D View
TMV Map using Random Conventional Illumination
CryoEM
Release date: May 6, 2026
Resolution: 3.45 Å
EM Method: Single-particle

Kumar V, Radecke J, Chinmaya KV, Mohammed I, Ferreira RC, Harder D, Fotiadis D, Stahlberg H

To Be Published

EMD-55006
Download Map
3D View
Cryo-EM structure of Tobacco Mosaic Virus TMV prepared using the cryoWriter automated grid preparation system with spiral writing.
CryoEM
Release date: Feb. 4, 2026
Resolution: 1.83 Å
EM Method: Helical reconstruction

Chinmaya KV, Ekundayo B, Di Fabrizio M, Mohammed I, Radecke J, Stahlberg H, Kube M

To Be Published

EMD-53716
Download Map
3D View
Hexahistidine-tagged tobacco mosaic virus coat protein 3-layer disk
CryoEM
Release date: Dec. 10, 2025
Resolution: 3.05 Å
EM Method: Single-particle

Abu-Baker I, Al-Feghali A, Zolfaghar E, Velpula G, Biela AP, De Feyter S, Heddle JG, Cosa G, Blum AS

Small (2025) 21 pp. e07076-e07076 [ Pubmed: 41147046 DOI: doi:10.1002/smll.202507076 ]

EMD-53717
Download Map
3D View
Hexahistidine-tagged tobacco mosaic virus coat protein 4-layer disk
CryoEM
Release date: Dec. 10, 2025
Resolution: 3.18 Å
EM Method: Single-particle

Abu-Baker I, Al-Feghali A, Zolfaghar E, Velpula G, Biela AP, De Feyter S, Heddle JG, Cosa G, Blum AS

Small (2025) 21 pp. e07076-e07076 [ Pubmed: 41147046 DOI: doi:10.1002/smll.202507076 ]

EMD-53718
Download Map
3D View
Hexahistidine-tagged tobacco mosaic virus coat protein 5-layer disk
CryoEM
Release date: Dec. 10, 2025
Resolution: 3.75 Å
EM Method: Single-particle

Abu-Baker I, Al-Feghali A, Zolfaghar E, Velpula G, Biela AP, De Feyter S, Heddle JG, Cosa G, Blum AS

Small (2025) 21 pp. e07076-e07076 [ Pubmed: 41147046 DOI: doi:10.1002/smll.202507076 ]

EMD-53720
Download Map
3D View
Hexahistidine-tagged tobacco mosaic virus coat protein 6-layer disk
CryoEM
Release date: Dec. 10, 2025
Resolution: 3.37 Å
EM Method: Single-particle

Abu-Baker I, Al-Feghali A, Zolfaghar E, Velpula G, Biela AP, De Feyter S, Heddle JG, Cosa G, Blum AS

Small (2025) 21 pp. e07076-e07076 [ Pubmed: 41147046 DOI: doi:10.1002/smll.202507076 ]

EMD-39712
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3D View
1.4A Tobacco Mosaic Virus CryoSPARC processing from Falcon 4 data
CryoEM
Release date: May 8, 2024
Resolution: 1.43 Å
EM Method: Helical reconstruction

Burton-Smith RN, Murata K

To Be Published

EMD-19885
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3D View
Raw data
EMPIAR-12234 EMPIAR-12236 EMPIAR-12233
Low-dose cryo-electron ptychographic reconstruction of TMV recorded with CSA of 6.1 mrad
CryoEM
Release date: April 24, 2024
Resolution: 6.4 Å
EM Method: Helical reconstruction

Kucukoglu B, Mohammed I, Guerrero-Ferreira RC, Ribet SM, Varnavides G, Leidl ML, Lau K, Nazarov S, Myasnikov A, Kube M, Radecke J, Sachse C, Muller-Caspary K, Ophus C, Stahlberg H

Nat Commun (2024) 15 pp. 8062-8062 [ Pubmed: 39277607 DOI: doi:10.1038/s41467-024-52403-5 ]

EMD-19489
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3D View
Tobacco mosaic virus from scanning transmission electron microscopy at CSA 2.0 mrad
CryoEM
Release date: March 27, 2024
Resolution: 5.4 Å
EM Method: Helical reconstruction

Henderikx RJM, Mann D, Domanska A, Dong J, Shahzad S, Lak B, Filopoulou A, Ludig D, Grininger M, Momoh J, Laanto E, Oksanen HM, Bisikalo K, Williams PA, Butcher SJ, Peters PJ, Beulen BWAMM

Acta Crystallogr D Struct Biol (2024) 80 pp. 232-246 [ Pubmed: 38488730 DOI: doi:10.1107/S2059798324001852 ]

Sort by: Download
Showing 1 - 10 of 40. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [40]

Current status

  • REL [40]

Sample type

  • Virus [31]
  • Protein [15]
  • Sample [14]
  • RNA [9]
  • Complex [8]
  • Ligand [2]

Organism

  • Tobacco mosaic virus [29]
  • Tobacco mosaic virus [9]
  • Nicotiana tabacum [4]
  • 12246 [1]

EM Method

  • Helical reconstruction [30]
  • Single-particle [8]
  • Subtomogram averaging [1]
  • Tomography [1]

Resolution

  • < 2Å [5]
  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [16]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 0-50 kDa [2]
  • 250-500 kDa [1]
  • 500-1000 kDa [10]

Release Date

  • 2026 [3]
  • 2025 [4]
  • 2024 [3]
  • 2023 [2]
  • 2022 [7]
  • 2021 [2]
  • 2020 [1]
  • 2019 [4]
  • 2015 [1]
  • 2014 [10]
  • 2011 [1]
  • 2010 [1]
  • 2007 [1]

Author by name

  • Sachse C [20]
  • Jakobi AJ [12]
  • Bharat TA [10]
  • Bharat TAM [10]
  • Fromm SA [10]
  • Hagen WJ [10]
  • Hagen WJH [10]
  • Beckers M [7]
  • Leidl ML [6]
  • Mann D [6]
  • Muller-caspary K [6]
  • Bosch EGT [5]
  • Egoavil R [5]
  • Lazic I [5]
  • Mohammed I [5]
  • Pechnikova EV [5]
  • Stahlberg H [5]
  • Wirix M [5]
  • De Haas F [5]
  • Abu-baker I [4]
  • Al-feghali A [4]
  • Biela AP [4]
  • Blum AS [4]
  • Cosa G [4]
  • De Feyter S [4]
  • Heddle JG [4]
  • Radecke J [4]
  • Velpula G [4]
  • Weis F [4]
  • Zolfaghar E [4]
  • Chinmaya KV [3]
  • Evers WH [2]
  • Ferreira RC [2]
  • Fotiadis D [2]
  • Grigorieff N [2]
  • Harder D [2]
  • Huber ST [2]
  • Huijink R [2]
  • Kube M [2]
  • Kumar V [2]
  • Sarajlic E [2]
  • Von Der Hocht I [2]
  • Albiez S [1]
  • Beulen BWAMM [1]
  • Bhella D [1]
  • Bisikalo K [1]
  • Bobe D [1]
  • Bottcher B [1]
  • Braun T [1]
  • Bukharova T [1]
  • Burton-smith RN [1]
  • Butcher SJ [1]
  • Chen JZ [1]
  • Chen W [1]
  • Clare DK [1]
  • Coureux PD [1]
  • Di Fabrizio M [1]
  • Dietrich L [1]
  • Dobias F [1]
  • Domanska A [1]
  • Dong J [1]
  • Effantin G [1]
  • Ekundayo B [1]
  • Eng ET [1]
  • Fandrich M [1]
  • Filopoulou A [1]
  • Flegler V [1]
  • Flegler VJ [1]
  • Flot D [1]
  • Ge P [1]
  • Giraud T [1]
  • Gonzalez B [1]
  • Grininger M [1]
  • Guerrero-ferreira RC [1]
  • Henderikx RJM [1]
  • Hons M [1]
  • Jiang W [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Kovacik L [1]
  • Kucukoglu B [1]
  • Kudryashev M [1]
  • Laanto E [1]
  • Lak B [1]
  • Lau K [1]
  • Lenhart J [1]
  • Leonard GA [1]
  • Love AJ [1]
  • Ludig D [1]
  • Makbul C [1]
  • Mcgeachy K [1]
  • Miller J [1]
  • Momoh J [1]
  • Mueller-dieckmann C [1]
  • Murata K [1]
  • Myasnikov A [1]
  • Nazarov S [1]
  • Oksanen HM [1]
  • Oliva P [1]
  • Ophus C [1]

Author by ORCID

  • Sachse C [17]
  • Jakobi AJ [10]
  • Hagen WJ [8]
  • Bharat TA [8]
  • Fromm SA [8]
  • Beckers M [7]
  • Leidl ML [6]
  • Mann D [6]
  • Lazic I [5]
  • Biela AP [4]
  • Blum AS [4]
  • Abu-baker I [4]
  • Velpula G [4]
  • De Feyter S [4]
  • Weis F [4]
  • Cosa G [4]
  • Heddle JG [4]
  • Al-feghali A [4]
  • Von Der Hocht I [2]
  • Stahlberg H [2]
  • Grigorieff N [2]
  • Evers WH [2]
  • Huber ST [2]
  • Leonard GA [1]
  • Butcher SJ [1]
  • Sun C [1]
  • Mohammed I [1]
  • Varnavides G [1]
  • Filopoulou A [1]
  • Ludig D [1]
  • Miller J [1]
  • Williams PA [1]
  • Jiang W [1]
  • Schoehn G [1]
  • Muller-caspary K [1]
  • Ge P [1]
  • Peters PJ [1]
  • Clare DK [1]
  • Guerrero-ferreira RC [1]
  • Domanska A [1]
  • Stroupe ME [1]
  • Zhang Y [1]
  • Svensson O [1]
  • Effantin G [1]
  • Bobe D [1]
  • Bisikalo K [1]
  • Bottcher B [1]
  • Eng ET [1]
  • Hons M [1]
  • Lau K [1]
  • Braun T [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Rasmussen T [1]
  • Chinmaya KV [1]
  • Di Fabrizio M [1]
  • Ekundayo B [1]
  • Kube M [1]
  • Mohammed I [1]
  • Radecke J [1]
  • Stahlberg H [1]
  • Ophus C [1]
  • Myasnikov A [1]
  • Oksanen HM [1]
  • Orlova EV [1]
  • Kudryashev M [1]
  • Mueller-dieckmann C [1]

Journal

  • J STRUCT BIOL [12]
  • TO BE PUBLISHED [6]
  • NAT METHODS [5]
  • SMALL [4]
  • BIORXIV [3]
  • ACTA CRYSTALLOGR D STRUCT BIOL [2]
  • ELIFE [2]
  • EMBO REP [2]
  • J MOL BIOL [2]
  • NAT COMMUN [2]
  • PNAS [2]
  • ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
  • SCI REP [1]
  • ULTRAMICROSCOPY [1]

Software

  • RELION [14]
  • SPRING [12]
  • CRYOSPARC [9]
  • CHIMERA AND COOT [1]
  • CTFFIND [1]
  • FREALIX [1]
  • IHRSR, EMAN [1]
  • IMOD [1]
  • SPIDER [1]
  • SPIDER, IMAGIC [1]
  • XPLOR [1]

Microscope

  • FEI TITAN KRIOS [26]
  • TFS KRIOS [8]
  • FEI TECNAI F30 [2]
  • JEOL 3200FSC [2]
  • FEI POLARA 300 [1]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [40]

Film or detector model

  • FEI FALCON II 4K X 4K [9]
  • OTHER [6]
  • GATAN K2 SUMMIT 4K X 4K [5]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K2 QUANTUM 4K X 4K [3]
  • KODAK SO-163 FILM [3]
  • DECTRIS ELA 1K X 0.5K [1]
  • DIRECT ELECTRON APOLLO 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [40]
  • EMPIAR [18]
  • UniProt [15]
  • PDBe-Kb [14]
  • Gene Ontology [8]
  • InterPro [8]
  • Pfam [8]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]
  • CATH [1]