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sample_name:"Fako virus"

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Current Database

  • EMDB [9]

Current status

  • REL [9]

Sample type

  • Virus [9]
  • Protein [7]
  • Sample [2]

Organism

  • Fako virus [7]

EM Method

  • Single-particle [9]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [2]
  • ≥ 16Å and < 20Å [1]

Model molecular weight

  • > 10 MDa [1]

Release Date

  • 2019 [7]
  • 2014 [2]

Author by name

  • Auguste AJ [9]
  • Chiu W [9]
  • Kaelber JT [9]
  • Weaver SC [9]
  • Jiang W [7]
  • Carrington CVF [2]
  • Erasmus JH [2]
  • Fokam EB [2]
  • Guzman H [2]
  • Jakana J [2]
  • Kamgang B [2]
  • Liu X [2]
  • Popov VL [2]
  • Tesh RB [2]
  • Vasilakis N [2]
  • Widen SG [2]
  • Wood TG [2]

Author by ORCID

  • Auguste AJ [7]
  • Kaelber JT [7]
  • Chiu W [7]
  • Jiang W [5]
  • Carrington CVF [2]
  • Weaver SC [2]
  • Kamgang B [2]
  • Erasmus JH [2]
  • Fokam EB [2]

Journal

  • STRUCTURE [5]
  • J VIROL [2]
  • TO BE PUBLISHED [2]

Software

  • JSPR [7]
  • EMAN2 [1]
  • MPSA, EMAN2 [1]

Microscope

  • JEOL 3200FSC [8]
  • JEOL 2010F [1]

Electron Source

  • FIELD EMISSION GUN [9]

Film or detector model

  • DIRECT ELECTRON DE-20 5K X 3K [7]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • OTHER [1]

External links

  • PDB [9]
  • AlphaFold DB [1]
  • InterPro [1]
  • PDBe-Kb [1]
  • UniProt [1]
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Showing 1 - 9 of 9. Page 1 of 1
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EMD-7941
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Fako virus empty particles aligned to the best decoy map asymmetric reconstruction showing the locations of the polymerase complexes
CryoEM
Release date: Jan. 16, 2019
EM Method: Single-particle

Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W

Structure (2020) 28 pp. 604-612.e3 [ DOI: doi:10.1016/j.str.2020.01.011 Pubmed: 32049031 ]

EMD-7944
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Fako virus full particles, icosahedral reconstruction
CryoEM
Release date: Jan. 16, 2019
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6djy
Q-score: 0.454
Similar entry percentile: 81%

Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W

To Be Published

EMD-7945
Download Map
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Fako virus empty particles, icosahedral reconstruction
CryoEM
Release date: Jan. 16, 2019
Resolution: 4.2 Å
EM Method: Single-particle

Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W

To Be Published

EMD-7948
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Fako virus empty particles, D2-symmetrized reconstruction
CryoEM
Release date: Jan. 16, 2019
Resolution: 5.6 Å
EM Method: Single-particle

Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W

Structure (2020) 28 pp. 604-612.e3 [ DOI: doi:10.1016/j.str.2020.01.011 Pubmed: 32049031 ]

EMD-7949
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Fako virus full particles, D2-symmetrized reconstruction
CryoEM
Release date: Jan. 16, 2019
Resolution: 5.5 Å
EM Method: Single-particle

Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W

Structure (2020) 28 pp. 604-612.e3 [ DOI: doi:10.1016/j.str.2020.01.011 Pubmed: 32049031 ]

EMD-7953
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Fako virus empty particles, projection-matching reconstruction without imposed symmetry
CryoEM
Release date: Jan. 16, 2019
Resolution: 11.4 Å
EM Method: Single-particle

Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W

Structure (2020) 28 pp. 604-612.e3 [ DOI: doi:10.1016/j.str.2020.01.011 Pubmed: 32049031 ]

EMD-7954
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3D View
Fako virus full particles, projection-matching reconstruction without imposed symmetry
CryoEM
Release date: Jan. 16, 2019
Resolution: 10.7 Å
EM Method: Single-particle

Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W

Structure (2020) 28 pp. 604-612.e3 [ DOI: doi:10.1016/j.str.2020.01.011 Pubmed: 32049031 ]

EMD-6001
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Fako virus capsid: a newly-isolated reovirus has the simplest genomic and structural organization of any reovirus
CryoEM
Release date: Nov. 12, 2014
Resolution: 7.8 Å
EM Method: Single-particle

Auguste AJ, Kaelber JT, Fokam EB, Guzman H, Carrington CVF, Erasmus JH, Kamgang B, Popov VL, Jakana J, Liu X, Wood TG, Widen SG, Vasilakis N, Tesh RB, Chiu W, Weaver SC

J Virol (2015) 89 pp. 676-687 [ DOI: doi:10.1128/JVI.02264-14 Pubmed: 25355879 ]

EMD-6002
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Fako virus virion: a newly-isolated reovirus has the simplest genomic and structural organization of any reovirus
CryoEM
Release date: Nov. 12, 2014
Resolution: 17.0 Å
EM Method: Single-particle

Auguste AJ, Kaelber JT, Fokam EB, Guzman H, Carrington CVF, Erasmus JH, Kamgang B, Popov VL, Jakana J, Liu X, Wood TG, Widen SG, Vasilakis N, Tesh RB, Chiu W, Weaver SC

J Virol (2015) 89 pp. 676-687 [ DOI: doi:10.1128/JVI.02264-14 Pubmed: 25355879 ]

Sort by: Download
Showing 1 - 9 of 9. Page 1 of 1
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [9]

Current status

  • REL [9]

Sample type

  • Virus [9]
  • Protein [7]
  • Sample [2]

Organism

  • Fako virus [7]

EM Method

  • Single-particle [9]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [2]
  • ≥ 16Å and < 20Å [1]

Model molecular weight

  • > 10 MDa [1]

Release Date

  • 2019 [7]
  • 2014 [2]

Author by name

  • Auguste AJ [9]
  • Chiu W [9]
  • Kaelber JT [9]
  • Weaver SC [9]
  • Jiang W [7]
  • Carrington CVF [2]
  • Erasmus JH [2]
  • Fokam EB [2]
  • Guzman H [2]
  • Jakana J [2]
  • Kamgang B [2]
  • Liu X [2]
  • Popov VL [2]
  • Tesh RB [2]
  • Vasilakis N [2]
  • Widen SG [2]
  • Wood TG [2]

Author by ORCID

  • Auguste AJ [7]
  • Kaelber JT [7]
  • Chiu W [7]
  • Jiang W [5]
  • Carrington CVF [2]
  • Weaver SC [2]
  • Kamgang B [2]
  • Erasmus JH [2]
  • Fokam EB [2]

Journal

  • STRUCTURE [5]
  • J VIROL [2]
  • TO BE PUBLISHED [2]

Software

  • JSPR [7]
  • EMAN2 [1]
  • MPSA, EMAN2 [1]

Microscope

  • JEOL 3200FSC [8]
  • JEOL 2010F [1]

Electron Source

  • FIELD EMISSION GUN [9]

Film or detector model

  • DIRECT ELECTRON DE-20 5K X 3K [7]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • OTHER [1]

External links

  • PDB [9]
  • AlphaFold DB [1]
  • InterPro [1]
  • PDBe-Kb [1]
  • UniProt [1]