Electron Microscopy Data Bank

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primary_citation_author:"Xu Z"

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Current Database

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Sample type

Organism

Homo sapiens [158]
Severe acute respiratory syndrome coronavirus [59]
Mus musculus [32]
Synthetic construct [22]
Saccharomyces cerevisiae [18]
Lama glama [15]
Saccharomyces cerevisiae [10]
Rhinovirus b [4]
(no species) [4]
Influenza a virus [4]
(no species) [4]
Odocoileus virginianus [4]
Severe acute respiratory syndrome coronavirus [3]
Escherichia coli [3]
Drosophila melanogaster [3]
Vulpes vulpes [3]
Oryctolagus cuniculus [3]
Rattus norvegicus [2]
Western equine encephalitis virus [2]
Japanese encephalitis virus [2]
Human immunodeficiency virus 1 [2]
Carlito syrichta [2]
Cryptococcus neoformans [2]
Severe acute respiratory syndrome coronavirus [2]
Nyctereutes procyonoides [2]
Enterovirus a [2]
(no species) [2]
Severe acute respiratory syndrome coronavirus [2]
Odocoileus virginianus [2]
Bos taurus [2]
Mesocricetus auratus [1]
Enterobacteria phage t4 [1]
Vibrio parahaemolyticus [1]
Noctueliopsis virula [1]
Vicugna pacos [1]
(no species) [1]
Escherichia coli [1]
Burkholderia cenocepacia [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Xu Z [244]
Liu K [65]
Gao GF [64]
Li L [57]
Qi J [51]
Wang X [48]
He Y [45]
Li X [40]
Qi JX [39]
Li D [38]
Guo C [35]
Zhang A [35]
Zhao X [35]
Liu Y [33]
Sun J [33]
Xia R [33]
Shi K [31]
Zhao J [31]
Yan W [30]
Zhang L [30]
Li LJ [29]
Liu L [29]
Shao Z [29]
Luo C [27]
Tian X [27]
Deng Y [25]
Qian Y [25]
Shao ZH [24]
Li W [23]
Wang N [23]
Wang Y [23]
Zhang X [23]
Zhao Z [23]
Yu G [22]
Zhu X [22]
Duan Y [21]
Gu Y [21]
Xie Y [21]
Zhang W [21]
Deng Z [20]
Yin H [20]
Zhang Y [20]
Zhao C [20]
Ma X [19]
Pan M [19]
Su L [19]
Tong Z [19]
Wang H [19]
Yang S [19]
Yong X [19]
Liang J [18]
Meng Y [18]
Ai HS [17]
Chai Y [17]
Fan Z [17]
Gu YH [17]
Liu J [17]
Shi KY [17]
Wu C [17]
Wu L [17]
Yu J [17]
Han P [16]
Zhou J [16]
Ai H [15]
Chen P [15]
Du Y [15]
Sun JP [15]
Bai B [14]
Cong M [14]
Diberto JF [14]
Fay JF [14]
Gumpper RH [14]
Hu S [14]
Jain MK [14]
Jin J [14]
Kaniskan HU [14]
Kapolka NJ [14]
Kim K [14]
Krumm BE [14]
Li JB [14]
Ma Z [14]
Nichols DE [14]
Roth BL [14]
Shang G [14]
Shu C [14]
Sun M [14]
Sun N [14]
Sun R [14]
Tan H [14]
Zhai Y [14]
Liu X [13]
Shi Q [13]
Wang P [13]
Wang Q [13]
Xie YF [13]
Zhang D [13]
Cheng L [12]
Huang Z [12]
Li OY [12]
Ma J [12]

Author by ORCID

Gao GF [43]
He Y [27]
Liu K [26]
Qi J [26]
Shao Z [23]
Yu G [22]
Yan W [19]
Xie Y [17]
Sun J [17]
Yang S [15]
Xu Z [15]
Zhao C [15]
Kaniskan HU [14]
Krumm BE [14]
Jain MK [14]
Roth BL [14]
Zhao X [14]
Jin J [14]
Wang X [14]
Yong X [14]
Zhai Y [14]
Gumpper RH [14]
Fay JF [14]
Han P [13]
Wang P [12]
Sun Y [12]
Ai H [12]
Tian X [11]
Deng Z [11]
Dang S [10]
Li XD [10]
Yu D [10]
Liu L [9]
Ishibashi T [9]
Xu Z [9]
Xu Y [9]
Feng Y [9]
Yang F [9]
Yu X [9]
Sun JP [9]
Pan M [8]
Rao Z [8]
Tong Z [8]
Zhao J [8]
Lou Z [8]
Schnicker NJ [7]
Sun M [7]
Xu F [7]
Du Y [7]
Shi Q [7]
Jiang W [6]
Inoue A [6]
Awang T [6]
Zhang Y [5]
Lv X [5]
Lu P [5]
Ma X [5]
Wang Y [5]
Ni R [5]
Li N [5]
Liu J [5]
Ke B [5]
Tian X [5]
Dong S [5]
Xia A [5]
Feng J [5]
Huo Y [5]
Yu J [5]
Cimadevila M [5]
Xu C [5]
He C [5]
Su C [5]
Zhang Y [5]
Jiang M [5]
Tye BK [5]
Fan Z [5]
Li YX [5]
Li Q [5]
Niu T [5]
Xie J [5]
Lin J [5]
Zhang L [5]
Gao N [5]
Liu C [5]
Mi L [5]
Wan ZL [5]
Chang Z [5]
Sun H [5]
Liu Y [5]
Chen KY [4]
Vischer HF [4]
Gao Y [4]
Liu Y [4]
Huang L [4]
Wei Q [4]
Kawakami K [4]
Witte L [4]
Li W [4]
Jia G [4]
Wang C [4]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links

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EMDB [244]
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EMD-39549

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3D View

Cryo-EM Structure of Human Protease-Activated Receptor 4 in complex with Gq heterotrimers and ScFv16 bound to Tethered Ligand

CryoEM

Release date: June 10, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8yrq
Q-score: 0.505

Xu Z, Zhang H

To Be Published

EMD-68208

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Gi bound kappa-opioid receptor in complex with beta01

CryoEM

Release date: May 6, 2026
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 22em
Q-score: 0.398

Zhang H, Wang R, Shi P, He X, Zhu Q, Xu Y, Yuan Q, Hu W, Wu K, Zheng Y, Zhou L, Liang J, Lv P, Xu Z, Zhuang Y, Xu H, Wang Y, Tian C

To Be Published

EMD-68217

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Gi bound kappa-opioid receptor in complex with difelikefalin

CryoEM

Release date: May 6, 2026
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 22es
Q-score: 0.548

Zhang H, Wang R, Shi P, He X, Zhu Q, Xu Y, Yuan Q, Hu W, Wu K, Zheng Y, Zhou L, Liang J, Lv P, Xu Z, Zhuang Y, Xu H, Wang Y, Tian C

To Be Published

EMD-65379

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Cryo-EM structure of the erlin1/2 complex purified using GDN and CHS

Composite map

CryoEM

Release date: March 25, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9vvg
Q-score: 0.689

Yan L, Xu Z, Yao Y, Awang T, Wang X, Wang Y, Ma C, Li N, Song C, Chen XW, Gao N

Mol Cell (2026) 86 pp. 1362-1376.e5 [ DOI: doi:10.1016/j.molcel.2026.03.001 Pubmed: 41887216 ]

EMD-65382

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Cryo-EM structure of the erlin1/2 complex purified using DDM and GDN

Composite map

CryoEM

Release date: March 25, 2026
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 9vvj
Q-score: 0.665

Yan L, Xu Z, Yao Y, Awang T, Wang X, Wang Y, Ma C, Li N, Song C, Chen XW, Gao N

Mol Cell (2026) 86 pp. 1362-1376.e5 [ DOI: doi:10.1016/j.molcel.2026.03.001 Pubmed: 41887216 ]

EMD-65430

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Cryo-EM structure of the cage-top domain of the erlin1/2 complex purified using DDM and GDN

CryoEM

Focused map

Release date: March 25, 2026
Resolution: 2.7 Å
EM Method: Single-particle

Yan L, Xu Z, Yao Y, Awang T, Wang X, Wang Y, Ma C, Li N, Song C, Chen XW, Gao N

Mol Cell (2026) 86 pp. 1362-1376.e5 [ DOI: doi:10.1016/j.molcel.2026.03.001 Pubmed: 41887216 ]

EMD-65432

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Cryo-EM overall structure of the erlin1/2 complex purified using DDM and GDN

CryoEM

Consensus map

Release date: March 25, 2026
Resolution: 2.6 Å
EM Method: Single-particle

Yan L, Xu Z, Yao Y, Awang T, Wang X, Wang Y, Ma C, Li N, Song C, Chen XW, Gao N

Mol Cell (2026) 86 pp. 1362-1376.e5 [ DOI: doi:10.1016/j.molcel.2026.03.001 Pubmed: 41887216 ]

EMD-65436

Download Map

3D View

Cryo-EM overall structure of the erlin1/2 complex purified using GDN and CHS

CryoEM

Consensus map

Release date: March 25, 2026
Resolution: 2.7 Å
EM Method: Single-particle

Yan L, Xu Z, Yao Y, Awang T, Wang X, Wang Y, Ma C, Li N, Song C, Chen XW, Gao N

Mol Cell (2026) 86 pp. 1362-1376.e5 [ DOI: doi:10.1016/j.molcel.2026.03.001 Pubmed: 41887216 ]

EMD-65438

Download Map

3D View

Cryo-EM structure of the cage-top domain of the erlin1/2 complex purified using GDN and CHS

CryoEM

Focused map

Release date: March 25, 2026
Resolution: 2.8 Å
EM Method: Single-particle

Yan L, Xu Z, Yao Y, Awang T, Wang X, Wang Y, Ma C, Li N, Song C, Chen XW, Gao N

Mol Cell (2026) 86 pp. 1362-1376.e5 [ DOI: doi:10.1016/j.molcel.2026.03.001 Pubmed: 41887216 ]

EMD-61131

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Cryo-EM structure of aPlexinA1-19-43 Fab in complex with PlexinA1 dimer

CryoEM

Release date: Jan. 21, 2026
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 9j4c
Q-score: 0.26

Tian H, Fung CP, Burman L, Chong YE, Liu C, Geng Y, Yang L, Chow MW, Zhang Y, Ho KWH, Zhu G, Wu Z, Yang XL, Xu Z, Nangle LA

J Biol Chem (2025) 302 pp. 111056-111056 [ DOI: doi:10.1016/j.jbc.2025.111056 Pubmed: 41391772 ]

Sort by: Download

Showing 1 - 10 of 245. Page 1 of 25

Display:

Statistics

Download

Select database:

EMDB [244]
EMPIAR [1]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [158]
Severe acute respiratory syndrome coronavirus [59]
Mus musculus [32]
Synthetic construct [22]
Saccharomyces cerevisiae [18]
Lama glama [15]
Saccharomyces cerevisiae [10]
Rhinovirus b [4]
(no species) [4]
Influenza a virus [4]
(no species) [4]
Odocoileus virginianus [4]
Severe acute respiratory syndrome coronavirus [3]
Escherichia coli [3]
Drosophila melanogaster [3]
Vulpes vulpes [3]
Oryctolagus cuniculus [3]
Rattus norvegicus [2]
Western equine encephalitis virus [2]
Japanese encephalitis virus [2]
Human immunodeficiency virus 1 [2]
Carlito syrichta [2]
Cryptococcus neoformans [2]
Severe acute respiratory syndrome coronavirus [2]
Nyctereutes procyonoides [2]
Enterovirus a [2]
(no species) [2]
Severe acute respiratory syndrome coronavirus [2]
Odocoileus virginianus [2]
Bos taurus [2]
Mesocricetus auratus [1]
Enterobacteria phage t4 [1]
Vibrio parahaemolyticus [1]
Noctueliopsis virula [1]
Vicugna pacos [1]
(no species) [1]
Escherichia coli [1]
Burkholderia cenocepacia [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Xu Z [244]
Liu K [65]
Gao GF [64]
Li L [57]
Qi J [51]
Wang X [48]
He Y [45]
Li X [40]
Qi JX [39]
Li D [38]
Guo C [35]
Zhang A [35]
Zhao X [35]
Liu Y [33]
Sun J [33]
Xia R [33]
Shi K [31]
Zhao J [31]
Yan W [30]
Zhang L [30]
Li LJ [29]
Liu L [29]
Shao Z [29]
Luo C [27]
Tian X [27]
Deng Y [25]
Qian Y [25]
Shao ZH [24]
Li W [23]
Wang N [23]
Wang Y [23]
Zhang X [23]
Zhao Z [23]
Yu G [22]
Zhu X [22]
Duan Y [21]
Gu Y [21]
Xie Y [21]
Zhang W [21]
Deng Z [20]
Yin H [20]
Zhang Y [20]
Zhao C [20]
Ma X [19]
Pan M [19]
Su L [19]
Tong Z [19]
Wang H [19]
Yang S [19]
Yong X [19]
Liang J [18]
Meng Y [18]
Ai HS [17]
Chai Y [17]
Fan Z [17]
Gu YH [17]
Liu J [17]
Shi KY [17]
Wu C [17]
Wu L [17]
Yu J [17]
Han P [16]
Zhou J [16]
Ai H [15]
Chen P [15]
Du Y [15]
Sun JP [15]
Bai B [14]
Cong M [14]
Diberto JF [14]
Fay JF [14]
Gumpper RH [14]
Hu S [14]
Jain MK [14]
Jin J [14]
Kaniskan HU [14]
Kapolka NJ [14]
Kim K [14]
Krumm BE [14]
Li JB [14]
Ma Z [14]
Nichols DE [14]
Roth BL [14]
Shang G [14]
Shu C [14]
Sun M [14]
Sun N [14]
Sun R [14]
Tan H [14]
Zhai Y [14]
Liu X [13]
Shi Q [13]
Wang P [13]
Wang Q [13]
Xie YF [13]
Zhang D [13]
Cheng L [12]
Huang Z [12]
Li OY [12]
Ma J [12]

Author by ORCID

Gao GF [43]
He Y [27]
Liu K [26]
Qi J [26]
Shao Z [23]
Yu G [22]
Yan W [19]
Xie Y [17]
Sun J [17]
Yang S [15]
Xu Z [15]
Zhao C [15]
Kaniskan HU [14]
Krumm BE [14]
Jain MK [14]
Roth BL [14]
Zhao X [14]
Jin J [14]
Wang X [14]
Yong X [14]
Zhai Y [14]
Gumpper RH [14]
Fay JF [14]
Han P [13]
Wang P [12]
Sun Y [12]
Ai H [12]
Tian X [11]
Deng Z [11]
Dang S [10]
Li XD [10]
Yu D [10]
Liu L [9]
Ishibashi T [9]
Xu Z [9]
Xu Y [9]
Feng Y [9]
Yang F [9]
Yu X [9]
Sun JP [9]
Pan M [8]
Rao Z [8]
Tong Z [8]
Zhao J [8]
Lou Z [8]
Schnicker NJ [7]
Sun M [7]
Xu F [7]
Du Y [7]
Shi Q [7]
Jiang W [6]
Inoue A [6]
Awang T [6]
Zhang Y [5]
Lv X [5]
Lu P [5]
Ma X [5]
Wang Y [5]
Ni R [5]
Li N [5]
Liu J [5]
Ke B [5]
Tian X [5]
Dong S [5]
Xia A [5]
Feng J [5]
Huo Y [5]
Yu J [5]
Cimadevila M [5]
Xu C [5]
He C [5]
Su C [5]
Zhang Y [5]
Jiang M [5]
Tye BK [5]
Fan Z [5]
Li YX [5]
Li Q [5]
Niu T [5]
Xie J [5]
Lin J [5]
Zhang L [5]
Gao N [5]
Liu C [5]
Mi L [5]
Wan ZL [5]
Chang Z [5]
Sun H [5]
Liu Y [5]
Chen KY [4]
Vischer HF [4]
Gao Y [4]
Liu Y [4]
Huang L [4]
Wei Q [4]
Kawakami K [4]
Witte L [4]
Li W [4]
Jia G [4]
Wang C [4]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links