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primary_citation_author:"Ubarretxena-Belandia I"

Filter By

Current Database

  • EMDB [41]
  • EMPIAR [6]

Current status

  • REL [47]

Sample type

  • Protein [36]
  • Complex [32]
  • Ligand [26]
  • DNA [7]
  • Cell [5]
  • Sample [3]
  • RNA [2]
  • Cellular component [1]

Organism

  • Homo sapiens [25]
  • Synthetic construct [8]
  • Saccharomyces cerevisiae [5]
  • Saccharomyces cerevisiae [3]
  • Myxococcus xanthus [2]
  • Shewanella oneidensis [1]
  • Dna molecule [1]
  • (no species) [1]
  • Pseudomonas aeruginosa [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [33]
  • Subtomogram averaging [5]
  • Helical reconstruction [2]
  • Electron Crystallography [1]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [14]
  • ≥ 3Å and < 4Å [17]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 12Å and < 16Å [4]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 0-50 kDa [2]
  • 100-250 kDa [7]
  • 250-500 kDa [14]
  • 500-1000 kDa [10]
  • 1-2 MDa [1]

Release Date

  • 2026 [2]
  • 2025 [27]
  • 2024 [8]
  • 2023 [1]
  • 2022 [1]
  • 2020 [4]
  • 2019 [1]
  • 2013 [1]
  • 2012 [1]
  • 2004 [1]

Author by name

  • Ubarretxena-belandia I [47]
  • Lopez-alonso JP [33]
  • Tascon I [28]
  • Malik R [20]
  • Gomez-llorente Y [16]
  • Azem A [13]
  • Hirsch JA [13]
  • Jebara F [13]
  • Patra M [13]
  • Ehses K [12]
  • Fernandez-busnadiego R [12]
  • Berruezo AG [11]
  • Gil-carton D [11]
  • Shkolnisky Y [11]
  • Vilchez-garcia J [11]
  • Aggarwal AK [7]
  • Johnson RE [7]
  • Prakash L [7]
  • Prakash S [7]
  • Abdussalam A [6]
  • Antico O [6]
  • Gonzalez A [6]
  • Muqit MMK [6]
  • Abascal-palacios G [4]
  • Aransay AM [4]
  • Beisel CL [4]
  • Gonzalez-lopez M [4]
  • Jabalera Y [4]
  • Jain R [4]
  • Perez-jimenez R [4]
  • Samperio S [4]
  • Ochoa-lizarralde B [3]
  • Albesa-jove D [2]
  • Altuna-alvarez J [2]
  • Bernal-bernal D [2]
  • Chomsky-hecht O [2]
  • Elias-arnanz M [2]
  • Galbis-martinez M [2]
  • Gonzalez-magana A [2]
  • Kopylov M [2]
  • Lopez-rojo A [2]
  • Lopez-ruiz JA [2]
  • Nisemblat S [2]
  • Padmanabhan S [2]
  • Pantoja-uceda D [2]
  • Parnas A [2]
  • Velazquez C [2]
  • Zabala M [2]
  • Alcaraz A [1]
  • Baldwin JM [1]
  • Cardenas M [1]
  • Colautti J [1]
  • Coudray N [1]
  • Escobedo-gonzales FC [1]
  • Fang J [1]
  • Filizola M [1]
  • Hu M [1]
  • Jian H [1]
  • Jiang H [1]
  • Kim C [1]
  • Lasala R [1]
  • López-alonso JP [1]
  • Mompean M [1]
  • Penczek PA [1]
  • Polonio P [1]
  • Provasi D [1]
  • Queralt-martin M [1]
  • Rice W [1]
  • Rice WJ [1]
  • Rojas-palomino J [1]
  • Roy Choudhury J [1]
  • Schuldiner S [1]
  • Stokes DL [1]
  • Tao J [1]
  • Tate CG [1]
  • Titaux-delgado GA [1]
  • Ubarretxena IB [1]
  • Ubarrextena-belandia I [1]
  • Valvo S [1]
  • Vink M [1]
  • Whitney JC [1]
  • Zhou M [1]

Author by ORCID

  • Ubarretxena-belandia I [32]
  • Lopez-alonso JP [24]
  • Tascon I [24]
  • Malik R [20]
  • Hirsch JA [13]
  • Azem A [13]
  • Berruezo AG [11]
  • Shkolnisky Y [11]
  • Vilchez-garcia J [11]
  • Gomez-llorente Y [11]
  • Gil-carton D [11]
  • Gonzalez A [6]
  • Fernandez-busnadiego R [6]
  • Ehses K [6]
  • Aggarwal AK [6]
  • Perez-jimenez R [4]
  • Samperio S [4]
  • Abascal-palacios G [4]
  • Aransay AM [4]
  • Beisel CL [4]
  • Jabalera Y [4]
  • Jain R [3]
  • Ochoa-lizarralde B [2]
  • Johnson RE [2]
  • Padmanabhan S [2]
  • Kopylov M [2]
  • Galbis-martinez M [2]
  • Elias-arnanz M [2]
  • Pantoja-uceda D [2]
  • Bernal-bernal D [2]
  • Lopez-rojo A [2]
  • Prakash S [1]
  • Velazquez C [1]
  • Queralt-martin M [1]
  • Tate CG [1]
  • Titaux-delgado GA [1]
  • Vink M [1]
  • Filizola M [1]
  • Whitney JC [1]
  • Schuldiner S [1]
  • Altuna-alvarez J [1]
  • Mompean M [1]
  • Gonzalez-magana A [1]
  • Coudray N [1]
  • Alcaraz A [1]
  • Cardenas M [1]
  • Escobedo-gonzales FC [1]
  • Albesa-jove D [1]
  • Rojas-palomino J [1]
  • Polonio P [1]
  • Jiang H [1]

Journal

  • BIORXIV [12]
  • TO BE PUBLISHED [12]
  • NAT BIOTECHNOL [6]
  • NAT COMMUN [5]
  • NAT STRUCT MOL BIOL [5]
  • SCI ADV [4]
  • NATURE BIOTECHNOLOGY [2]
  • CELL REP [1]
  • EMBO J [1]
  • PNAS [1]

Software

  • CRYOSPARC [19]
  • RELION [11]
  • DYNAMO [5]
  • MATLAB [5]
  • WARP [5]
  • CTFFIND [1]
  • MRC [1]
  • SPARX, EMIP [1]
  • XMIPP, EMAN2, SPIDER [1]

Microscope

  • FEI TITAN KRIOS [20]
  • TFS KRIOS [18]
  • FEI TECNAI F20 [1]
  • FEI TECNAI F30 [1]
  • JEOL 2100F [1]

Electron Source

  • FIELD EMISSION GUN [32]
  • LAB6 [9]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [16]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 BIOCONTINUUM 6K X 4K [7]
  • FEI FALCON IV 4K X 4K [5]
  • KODAK SO-163 FILM [2]
  • GENERIC TVIPS [1]
  • TFS FALCON 4I 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [6]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [5]
  • PICKED PARTICLES - SINGLE FRAME - UNPROCESSED [1]
  • TILT SERIES [1]

External links

  • PDB [34]
  • UniProt [32]
  • AlphaFold DB [31]
  • PDBe-Kb [31]
  • Pfam [27]
  • ChEBI [26]
  • DrugBank [25]
  • ChEMBL [23]
  • Gene Ontology [21]
  • InterPro [18]
  • EMPIAR [16]
  • Complex Portal [15]
  • EMDB [6]
Sort by: Download
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EMPIAR-13154
Related EMDB
EMD-54900 EMD-54898 EMD-54899 EMD-54902 EMD-54903 EMD-54901
Single-particle cryo-EM data of the Hsp60 chaperonin complex
Release date: Jan. 25, 2026
Dataset size: 43.6 TB
Experiment type: EMDB

Ehses K, López-Alonso JP, Antico O, Azem A, Muquit MMK, Ubarretxena-Belandia I, Fernández-Busnadiego R, Lang Y, Rudack T

Sci Adv ()

Image sets:
  • Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (30 seconds incubation time)
  • particles for ATP single ring, ADP single ring and ATP half football
  • Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (30 minutes incubation time)
  • Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (7 minutes incubation time)
  • Unaligned multi-frame micrographs of Hsp60 + Hsp10 + MgATP (1 minute incubation time)
  • particles for ATP football, ATP double ring and ATP bullet
[Show more]
EMPIAR-13155
Related EMDB
EMD-19543 EMD-19404
Cryo-EM structure of the transmembrane anti-sigma factor DdvA
Release date: Jan. 21, 2026
Dataset size: 12.7 TB
Experiment type: EMDB

Bernal-Bernal D, Pantoja-Uceda D, López-Alonso JP, López-Rojo A, López-Ruiz JA, Galbis-Martínez M, Ochoa-Lizarralde B, Tascón I, Elías-Arnanz M, Ubarretxena-Belandia I, Padmanabhan S

Sci Adv (2024) 10 [ Pubmed: 39454004 DOI: 10.1126/sciadv.adp1053 ]

Image sets:
  • Unaligned multi-frame micrographs of the transmembrane anti-sigma factor DdvA
EMPIAR-13175
Related EMDB
EMD-18691
Single-particle cryo-EM data of Apo ReChb
Release date: Dec. 23, 2025
Dataset size: 12.3 TB
Experiment type: EMDB

Jabalera Y, Tascón I, Samperio S, López-Alonso JP, Gonzalez-Lopez M, Aransay AM, Abascal-Palacios G, Beisel CL, Ubarretxena-Belandia I, Perez-Jimenez R

Nature biotechnology (2024) 43 pp. 1663-1672 [ Pubmed: 39482449 DOI: 10.1038/s41587-024-02461-3 ]

Image sets:
  • Unaligned multi-frame micrographs of Apo ReChb
EMPIAR-13177
Related EMDB
EMD-18694
Single-particle cryo-EM data of the quaternary complex of ReChb - crRNA - target dsDNA - collateral dsDNA
Release date: Dec. 23, 2025
Dataset size: 14.5 TB
Experiment type: EMDB

Jabalera Y, Tascón I, Samperio S, López-Alonso JP, Gonzalez-Lopez M, Aransay AM, Abascal-Palacios G, Beisel CL, Ubarretxena-Belandia I, Perez-Jimenez R

Nature biotechnology (2024) 43 pp. 1663-1672 [ Pubmed: 39482449 DOI: 10.1038/s41587-024-02461-3 ]

Image sets:
  • Unaligned multi-frame micrographs of the quaternary complex of ReChb - crRNA - target dsDNA - collateral dsDNA
EMPIAR-13145
Related EMDB
EMD-55204 EMD-55206 EMD-55207 EMD-55205 EMD-55203
Cryo-electron tomography of mitochondria from untreated and G-TPP treated HeLa cells
Release date: Dec. 16, 2025
Dataset size: 1005.9 GB
Experiment type: EMDB

Ehses K, López-Alonso JP, Antico O, Azem A, Muqit MM, Ubarretxena-Belandia I, Fernández-Busnadiego R

bioRxiv (2025) [ DOI: 10.1101/2025.10.06.680693 ]

Image sets:
  • Motion-corrected frames from acquired tilt-series
EMD-54898
Download Map
3D View
Raw data
EMPIAR-13154
ATP-bound human mitochondrial Hsp60-Hsp10 football complex D7
Release date: Dec. 10, 2025
Resolution: 1.91 Å
EM Method: Single-particle
Fitted PDBs: 9shg
Q-score: 0.707

Ehses K, Lopez-Alonso JP, Gonzalez A, Tascon I, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-54899
Download Map
3D View
Raw data
EMPIAR-13154
ATP-bound human mitochondrial Hsp60-Hsp10 bullet complex C7
Release date: Dec. 10, 2025
Resolution: 2.11 Å
EM Method: Single-particle
Fitted PDBs: 9shh
Q-score: 0.6

Ehses K, Lopez-Alonso JP, Gonzalez A, Tascon I, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-54900
Download Map
3D View
Raw data
EMPIAR-13154
ATP-bound human mitochondrial Hsp60-Hsp10 half-football complex C7
Release date: Dec. 10, 2025
Resolution: 2.19 Å
EM Method: Single-particle
Fitted PDBs: 9shi
Q-score: 0.644

Ehses K, Lopez-Alonso JP, Gonzalez A, Tascon I, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-54901
Download Map
3D View
Raw data
EMPIAR-13154
ATP-bound human mitochondrial Hsp60-Hsp10 double-ring complex D7
Release date: Dec. 10, 2025
Resolution: 2.18 Å
EM Method: Single-particle
Fitted PDBs: 9shj
Q-score: 0.483

Ehses K, Lopez-Alonso JP, Gonzalez A, Tascon I, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-54902
Download Map
3D View
Raw data
EMPIAR-13154
ADP-bound human mitochondrial Hsp60 single ring complex C7
Release date: Dec. 10, 2025
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 9shk
Q-score: 0.417

Ehses K, Lopez-Alonso JP, Gonzalez A, Tascon I, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

Sort by: Download
Showing 1 - 10 of 47. Page 1 of 5
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [41]
  • EMPIAR [6]

Current status

  • REL [47]

Sample type

  • Protein [36]
  • Complex [32]
  • Ligand [26]
  • DNA [7]
  • Cell [5]
  • Sample [3]
  • RNA [2]
  • Cellular component [1]

Organism

  • Homo sapiens [25]
  • Synthetic construct [8]
  • Saccharomyces cerevisiae [5]
  • Saccharomyces cerevisiae [3]
  • Myxococcus xanthus [2]
  • Shewanella oneidensis [1]
  • Dna molecule [1]
  • (no species) [1]
  • Pseudomonas aeruginosa [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [33]
  • Subtomogram averaging [5]
  • Helical reconstruction [2]
  • Electron Crystallography [1]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [14]
  • ≥ 3Å and < 4Å [17]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 12Å and < 16Å [4]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 0-50 kDa [2]
  • 100-250 kDa [7]
  • 250-500 kDa [14]
  • 500-1000 kDa [10]
  • 1-2 MDa [1]

Release Date

  • 2026 [2]
  • 2025 [27]
  • 2024 [8]
  • 2023 [1]
  • 2022 [1]
  • 2020 [4]
  • 2019 [1]
  • 2013 [1]
  • 2012 [1]
  • 2004 [1]

Author by name

  • Ubarretxena-belandia I [47]
  • Lopez-alonso JP [33]
  • Tascon I [28]
  • Malik R [20]
  • Gomez-llorente Y [16]
  • Azem A [13]
  • Hirsch JA [13]
  • Jebara F [13]
  • Patra M [13]
  • Ehses K [12]
  • Fernandez-busnadiego R [12]
  • Berruezo AG [11]
  • Gil-carton D [11]
  • Shkolnisky Y [11]
  • Vilchez-garcia J [11]
  • Aggarwal AK [7]
  • Johnson RE [7]
  • Prakash L [7]
  • Prakash S [7]
  • Abdussalam A [6]
  • Antico O [6]
  • Gonzalez A [6]
  • Muqit MMK [6]
  • Abascal-palacios G [4]
  • Aransay AM [4]
  • Beisel CL [4]
  • Gonzalez-lopez M [4]
  • Jabalera Y [4]
  • Jain R [4]
  • Perez-jimenez R [4]
  • Samperio S [4]
  • Ochoa-lizarralde B [3]
  • Albesa-jove D [2]
  • Altuna-alvarez J [2]
  • Bernal-bernal D [2]
  • Chomsky-hecht O [2]
  • Elias-arnanz M [2]
  • Galbis-martinez M [2]
  • Gonzalez-magana A [2]
  • Kopylov M [2]
  • Lopez-rojo A [2]
  • Lopez-ruiz JA [2]
  • Nisemblat S [2]
  • Padmanabhan S [2]
  • Pantoja-uceda D [2]
  • Parnas A [2]
  • Velazquez C [2]
  • Zabala M [2]
  • Alcaraz A [1]
  • Baldwin JM [1]
  • Cardenas M [1]
  • Colautti J [1]
  • Coudray N [1]
  • Escobedo-gonzales FC [1]
  • Fang J [1]
  • Filizola M [1]
  • Hu M [1]
  • Jian H [1]
  • Jiang H [1]
  • Kim C [1]
  • Lasala R [1]
  • López-alonso JP [1]
  • Mompean M [1]
  • Penczek PA [1]
  • Polonio P [1]
  • Provasi D [1]
  • Queralt-martin M [1]
  • Rice W [1]
  • Rice WJ [1]
  • Rojas-palomino J [1]
  • Roy Choudhury J [1]
  • Schuldiner S [1]
  • Stokes DL [1]
  • Tao J [1]
  • Tate CG [1]
  • Titaux-delgado GA [1]
  • Ubarretxena IB [1]
  • Ubarrextena-belandia I [1]
  • Valvo S [1]
  • Vink M [1]
  • Whitney JC [1]
  • Zhou M [1]

Author by ORCID

  • Ubarretxena-belandia I [32]
  • Lopez-alonso JP [24]
  • Tascon I [24]
  • Malik R [20]
  • Hirsch JA [13]
  • Azem A [13]
  • Berruezo AG [11]
  • Shkolnisky Y [11]
  • Vilchez-garcia J [11]
  • Gomez-llorente Y [11]
  • Gil-carton D [11]
  • Gonzalez A [6]
  • Fernandez-busnadiego R [6]
  • Ehses K [6]
  • Aggarwal AK [6]
  • Perez-jimenez R [4]
  • Samperio S [4]
  • Abascal-palacios G [4]
  • Aransay AM [4]
  • Beisel CL [4]
  • Jabalera Y [4]
  • Jain R [3]
  • Ochoa-lizarralde B [2]
  • Johnson RE [2]
  • Padmanabhan S [2]
  • Kopylov M [2]
  • Galbis-martinez M [2]
  • Elias-arnanz M [2]
  • Pantoja-uceda D [2]
  • Bernal-bernal D [2]
  • Lopez-rojo A [2]
  • Prakash S [1]
  • Velazquez C [1]
  • Queralt-martin M [1]
  • Tate CG [1]
  • Titaux-delgado GA [1]
  • Vink M [1]
  • Filizola M [1]
  • Whitney JC [1]
  • Schuldiner S [1]
  • Altuna-alvarez J [1]
  • Mompean M [1]
  • Gonzalez-magana A [1]
  • Coudray N [1]
  • Alcaraz A [1]
  • Cardenas M [1]
  • Escobedo-gonzales FC [1]
  • Albesa-jove D [1]
  • Rojas-palomino J [1]
  • Polonio P [1]
  • Jiang H [1]

Journal

  • BIORXIV [12]
  • TO BE PUBLISHED [12]
  • NAT BIOTECHNOL [6]
  • NAT COMMUN [5]
  • NAT STRUCT MOL BIOL [5]
  • SCI ADV [4]
  • NATURE BIOTECHNOLOGY [2]
  • CELL REP [1]
  • EMBO J [1]
  • PNAS [1]

Software

  • CRYOSPARC [19]
  • RELION [11]
  • DYNAMO [5]
  • MATLAB [5]
  • WARP [5]
  • CTFFIND [1]
  • MRC [1]
  • SPARX, EMIP [1]
  • XMIPP, EMAN2, SPIDER [1]

Microscope

  • FEI TITAN KRIOS [20]
  • TFS KRIOS [18]
  • FEI TECNAI F20 [1]
  • FEI TECNAI F30 [1]
  • JEOL 2100F [1]

Electron Source

  • FIELD EMISSION GUN [32]
  • LAB6 [9]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [16]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 BIOCONTINUUM 6K X 4K [7]
  • FEI FALCON IV 4K X 4K [5]
  • KODAK SO-163 FILM [2]
  • GENERIC TVIPS [1]
  • TFS FALCON 4I 4K X 4K [1]

EMPIAR Experiment type

  • EMDB [6]

EMPIAR Image category

  • MICROGRAPHS - MULTIFRAME [5]
  • PICKED PARTICLES - SINGLE FRAME - UNPROCESSED [1]
  • TILT SERIES [1]

External links

  • PDB [34]
  • UniProt [32]
  • AlphaFold DB [31]
  • PDBe-Kb [31]
  • Pfam [27]
  • ChEBI [26]
  • DrugBank [25]
  • ChEMBL [23]
  • Gene Ontology [21]
  • InterPro [18]
  • EMPIAR [16]
  • Complex Portal [15]
  • EMDB [6]