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primary_citation_author:"Stoddard CI"

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Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Cellular component [3]
  • Protein [3]
  • Complex [2]

Organism

  • Severe acute respiratory syndrome coronavirus [3]
  • Homo sapiens [2]
  • Synthetic construct [1]
  • Zea mays [1]
  • Saccharomyces cerevisiae [1]
  • Xenopus laevis [1]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 20Å and < 30Å [1]

Release Date

  • 2023 [3]
  • 2018 [1]
  • 2017 [1]

Author by name

  • Stoddard CI [5]
  • Bloom JD [3]
  • Chohan V [3]
  • Chu HY [3]
  • Croft JT [3]
  • Dadonaite B [3]
  • Ding S [3]
  • Finzi AS [3]
  • Guenthoer J [3]
  • Kopp MS [3]
  • Lee KK [3]
  • Lilly M [3]
  • Lovendahl KN [3]
  • Overbaugh J [3]
  • Ruiz F [3]
  • Starr TN [3]
  • Cheng Y [2]
  • Narlikar GJ [2]
  • Bernatavichute Y [1]
  • Burlingame AL [1]
  • Campbell MG [1]
  • Echeverria I [1]
  • Feng S [1]
  • Jacobsen SE [1]
  • Johnston JB [1]
  • Liu W [1]
  • Palovcak E [1]
  • Sali A [1]
  • Trnka MJ [1]
  • Wang H [1]
  • Zhong X [1]
  • Zhou CY [1]

Author by ORCID

  • Bloom JD [3]
  • Cheng Y [2]
  • Zhong X [1]
  • Stoddard CI [1]
  • Trnka MJ [1]
  • Campbell MG [1]
  • Echeverria I [1]

Journal

  • BIORXIV [3]
  • CELL REP [1]
  • MOL CELL [1]

Software

  • RELION [4]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [4]
  • FEI TECNAI 20 [1]

Electron Source

  • OTHER [3]
  • FIELD EMISSION GUN [1]
  • LAB6 [1]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • AlphaFold DB [2]
  • UniProt [2]
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EMD-29052
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SARS-CoV-2 Spike Hexapro - C68.59 Fab Class 3 - disordered
CryoEM
Release date: Jan. 11, 2023
Resolution: 9.2 Å
EM Method: Single-particle

Guenthoer J, Lilly M, Starr TN, Dadonaite B, Lovendahl KN, Croft JT, Stoddard CI, Chohan V, Ding S, Ruiz F, Kopp MS, Finzi AS, Bloom JD, Chu HY, Lee KK, Overbaugh J

bioRxiv (2023) [ Pubmed: 36561191 DOI: doi:10.1101/2022.12.15.520606 ]

EMD-29053
Download Map
3D View
SARS-CoV-2 Spike Hexapro - C59.68 Fab Class 1 - No Fab bound
CryoEM
Release date: Jan. 11, 2023
Resolution: 6.72 Å
EM Method: Single-particle

Guenthoer J, Lilly M, Starr TN, Dadonaite B, Lovendahl KN, Croft JT, Stoddard CI, Chohan V, Ding S, Ruiz F, Kopp MS, Finzi AS, Bloom JD, Chu HY, Lee KK, Overbaugh J

bioRxiv (2023) [ Pubmed: 36561191 DOI: doi:10.1101/2022.12.15.520606 ]

EMD-29054
Download Map
3D View
SARS-CoV-2 Spike Hexapro - C68.59 Fab Class 2 - Fab bound
CryoEM
Release date: Jan. 11, 2023
Resolution: 6.72 Å
EM Method: Single-particle

Guenthoer J, Lilly M, Starr TN, Dadonaite B, Lovendahl KN, Croft JT, Stoddard CI, Chohan V, Ding S, Ruiz F, Kopp MS, Finzi AS, Bloom JD, Chu HY, Lee KK, Overbaugh J

bioRxiv (2023) [ Pubmed: 36561191 DOI: doi:10.1101/2022.12.15.520606 ]

EMD-9127
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A nucleosome bridging mechanism for activation of a maintenance DNA methyltransferase
Negative staining
Release date: Oct. 31, 2018
Resolution: 28.0 Å
EM Method: Single-particle

Stoddard CI, Feng S, Campbell MG, Liu W, Wang H, Zhong X, Bernatavichute Y, Cheng Y, Jacobsen SE, Narlikar GJ

Mol Cell (2019) 73 pp. 73-83.e6 [ DOI: doi:10.1016/j.molcel.2018.10.006 Pubmed: 30415948 ]

EMD-8696
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3D View
Regulation of Rvb1/Rvb2 by a domain within the INO80 chromatin remodeling complex implicates the yeast Rvbs as protein assembly chaperones
CryoEM
Release date: June 7, 2017
Resolution: 9.6 Å
EM Method: Single-particle

Zhou CY, Stoddard CI, Johnston JB, Trnka MJ, Echeverria I, Palovcak E, Sali A, Burlingame AL, Cheng Y, Narlikar GJ

Cell Rep (2017) 19 pp. 2033-2044 [ Pubmed: 28591576 DOI: doi:10.1016/j.celrep.2017.05.029 ]

Sort by: Download
Showing 1 - 5 of 5. Page 1 of 1
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Cellular component [3]
  • Protein [3]
  • Complex [2]

Organism

  • Severe acute respiratory syndrome coronavirus [3]
  • Homo sapiens [2]
  • Synthetic construct [1]
  • Zea mays [1]
  • Saccharomyces cerevisiae [1]
  • Xenopus laevis [1]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 20Å and < 30Å [1]

Release Date

  • 2023 [3]
  • 2018 [1]
  • 2017 [1]

Author by name

  • Stoddard CI [5]
  • Bloom JD [3]
  • Chohan V [3]
  • Chu HY [3]
  • Croft JT [3]
  • Dadonaite B [3]
  • Ding S [3]
  • Finzi AS [3]
  • Guenthoer J [3]
  • Kopp MS [3]
  • Lee KK [3]
  • Lilly M [3]
  • Lovendahl KN [3]
  • Overbaugh J [3]
  • Ruiz F [3]
  • Starr TN [3]
  • Cheng Y [2]
  • Narlikar GJ [2]
  • Bernatavichute Y [1]
  • Burlingame AL [1]
  • Campbell MG [1]
  • Echeverria I [1]
  • Feng S [1]
  • Jacobsen SE [1]
  • Johnston JB [1]
  • Liu W [1]
  • Palovcak E [1]
  • Sali A [1]
  • Trnka MJ [1]
  • Wang H [1]
  • Zhong X [1]
  • Zhou CY [1]

Author by ORCID

  • Bloom JD [3]
  • Cheng Y [2]
  • Zhong X [1]
  • Stoddard CI [1]
  • Trnka MJ [1]
  • Campbell MG [1]
  • Echeverria I [1]

Journal

  • BIORXIV [3]
  • CELL REP [1]
  • MOL CELL [1]

Software

  • RELION [4]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [4]
  • FEI TECNAI 20 [1]

Electron Source

  • OTHER [3]
  • FIELD EMISSION GUN [1]
  • LAB6 [1]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • AlphaFold DB [2]
  • UniProt [2]