Electron Microscopy Data Bank

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primary_citation_author:"He J"

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Current Database

Current status

Sample type

Organism

Homo sapiens [109]
Severe acute respiratory syndrome coronavirus [72]
Synthetic construct [23]
Campylobacter jejuni [14]
Xenopus laevis [11]
Thogotovirus thogotoense [10]
Mycobacterium tuberculosis [10]
Severe acute respiratory syndrome coronavirus [10]
Saccharomyces cerevisiae [10]
Mus musculus [9]
Drosophila melanogaster [9]
Enterobacteria phage t4 [7]
Tetrahymena thermophila [7]
Mycobacterium tuberculosis [7]
African swine fever virus [6]
Porcine epidemic diarrhea virus [6]
Autographa californica multiple nucleopolyhedrovirus [6]
Nipah virus [5]
(no species) [4]
Scylla serrata reovirus sz-2007 [4]
Bat coronavirus [3]
Vibrio parahaemolyticus [3]
Bos mutus grunniens [3]
Saccharomyces cerevisiae [3]
Nomascus leucogenys [3]
Severe acute respiratory syndrome coronavirus [3]
Kenya bat coronavirus btky72 [3]
Mud crab virus [3]
Rattus norvegicus [2]
Hepatitis b virus [2]
Measles morbillivirus [2]
Staphylococcus aureus [2]
Streptococcus pyogenes [2]
Middle east respiratory syndrome-related coronavirus [2]
Clostridium botulinum [2]
(no species) [2]
Morbillivirus caprinae [2]
Erinaceus hedgehog coronavirus hku31 [2]
Streptococcus pyogenes [2]
Dianlovirus menglaense [2]
Rhinolophus affinis [2]
(no species) [2]
Bacteroides fragilis [2]
Sus scrofa [2]
Tequatrovirus t6 [1]
Semliki forest virus [1]
Synechococcus elongatus [1]
Foot-and-mouth disease virus [1]
Foot-and-mouth disease virus [1]
(no species) [1]
Middle east respiratory syndrome-related coronavirus [1]
Hedgehog coronavirus 1 [1]
Severe acute respiratory syndrome coronavirus [1]
Severe acute respiratory syndrome coronavirus [1]
Severe acute respiratory syndrome coronavirus [1]
Wenzhou tombus-like virus 18 [1]
Hypsugo bat coronavirus hku25 [1]
Firmicutes bacterium am43-11bh [1]
(no species) [1]
Pangolin coronavirus hku4/p251t/pangolin/2018 [1]
Arabidopsis thaliana [1]
Roseiflexus castenholzii [1]
Clostridium botulinum [1]
Neisseria meningitidis [1]
Rhinolophus landeri [1]
Escherichia coli [1]
Rhizophagus irregularis [1]
Zika virus [1]
Morbillivirus hominis [1]
Vibrio parahaemolyticus [1]
Spodoptera frugiperda [1]
Haemophilus parainfluenzae [1]
Bat coronavirus bm48-31/bgr/2008 [1]
Streptococcus sp. f0441 [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

He J [279]
Xiong X [108]
Li Z [100]
Liu B [90]
Chen X [88]
Zhang Y [77]
Gao X [76]
Wang J [73]
Chen Q [64]
Wang Q [61]
Liu Y [57]
Chen L [53]
Zhao H [48]
Yan Q [47]
Zhao J [46]
Ma Y [41]
Zhang Q [39]
Li M [37]
Wang P [37]
Zhang X [37]
Wang M [35]
Li J [31]
Wang C [31]
Wang X [31]
Chen J [30]
Chen Y [29]
Su M [29]
Yuan H [29]
Zhu Y [29]
Li H [28]
Zou B [28]
He Y [27]
Niu X [27]
Zheng H [27]
Guan J [26]
Liu J [26]
Wang Z [26]
Zhang J [26]
Huang Y [25]
Gao Y [23]
Liu L [23]
Shi J [23]
Wang Y [23]
Zhao X [23]
Liang H [22]
Pei R [22]
Habib G [21]
Li S [21]
Xue L [21]
Fu L [20]
Huang X [20]
Jia X [20]
Zhang H [20]
Chang T [19]
Li F [19]
Lin X [19]
Sun L [19]
Sun S [19]
Zhou P [19]
Dong S [18]
He P [18]
Hou R [18]
Liu C [18]
Liu X [18]
Briggs JAG [17]
Carter AP [17]
Ciazynska KA [17]
Qu K [17]
Wu J [17]
Xie Y [17]
Zhu S [17]
Zhou Y [16]
Guo L [15]
Hu P [15]
Jin L [15]
Li W [15]
Yang Y [15]
Zhong X [15]
Rasheed N [14]
She J [14]
Xie C [14]
Zhao Y [14]
Baker MAB [13]
Botting JM [13]
Chu H [13]
Feng X [13]
Gao B [13]
Guo J [13]
Hua C [13]
Jiang S [13]
Lara-tejero M [13]
Li K [13]
Long Y [13]
Lu L [13]
Mao Q [13]
Mayer CT [13]
Oliveira TY [13]
Qiu Y [13]
Qiu YN [13]
Tachiyama S [13]

Author by ORCID

Xiong X [103]
He J [78]
Chen X [48]
Gao X [37]
Chen L [28]
Liu Y [20]
Zhou P [19]
Habib G [19]
Wang J [19]
Yuan H [19]
Ma Y [19]
Zhao J [18]
Carter AP [17]
Qu K [17]
Ciazynska KA [17]
Briggs JAG [17]
Rasheed N [14]
Gao X [13]
Wang Q [13]
Jiang S [13]
Sun L [13]
Mayer CT [13]
Zhao X [13]
Wang Z [13]
Lu L [13]
Xie Y [13]
Oliveira TY [13]
Xie M [13]
Wu F [13]
Yan Q [13]
Wang P [13]
Chu H [13]
Xia R [13]
She J [12]
Lara-tejero M [12]
Gao B [12]
Baker MAB [12]
Gong P [12]
Liu J [12]
Botting JM [12]
Zhang Q [11]
Jia X [11]
Zhang X [10]
Wang P [10]
Shi Z [10]
Yu H [10]
Wang C [10]
Tang X [10]
Liu L [10]
Bao X [10]
Tang P [10]
Liu C [10]
Shi J [10]
Li F [10]
Wang M [10]
Wang X [10]
Chao WCH [10]
Li Z [10]
Shi ZL [9]
Ma J [9]
Huang Y [9]
Wang J [9]
Su S [9]
Li Z [9]
Lei M [7]
Wu J [7]
Zhang X [7]
Huang C [7]
Ma Y [7]
Wang Z [6]
Baker ML [6]
Zhu Y [6]
Wang HW [6]
Venkannagari H [6]
Qian H [6]
Sun F [6]
He J [6]
Guo J [6]
Li S [6]
Liu N [6]
Zhao Y [6]
He J [6]
Sun L [6]
Huang Y [6]
Gao GF [5]
Qi J [5]
Liu J [5]
Chen J [4]
Zhou Q [4]
Zhu S [4]
Kaelber JT [4]
Jiang W [4]
Li N [4]
Zhang Q [4]
Xue L [4]
Yang H [4]
Wen H [4]
Yang Y [4]
Diffley JFX [3]
Mao C [3]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links

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EMD-66501

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Glycoprotein of Mengla Virus with MR191 Fab bound

CryoEM

Release date: June 3, 2026
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 9x3j
Q-score: 0.44

Wang L, Zou B, Liu B, Ma Y, Xue L, Habib G, Yang X, Chen X, Chen J, Zhao J, Zhang Y, Yang Z, He J, Xiong X

PNAS (2026) 123 pp. e2529436123-e2529436123 [ Pubmed: 42247561 DOI: doi:10.1073/pnas.2529436123 ]

EMD-66502

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apo state of Mengla Virus Glycoprotein

CryoEM

Release date: June 3, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9x3k
Q-score: 0.507

Wang L, Zou B, Liu B, Ma Y, Xue L, Habib G, Yang X, Chen X, Chen J, Zhao J, Zhang Y, Yang Z, He J, Xiong X

PNAS (2026) 123 pp. e2529436123-e2529436123 [ Pubmed: 42247561 DOI: doi:10.1073/pnas.2529436123 ]

EMD-64742

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Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome

CryoEM

Release date: May 27, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9v2w
Q-score: 0.362

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ Pubmed: 42152683 DOI: doi:10.1093/nar/gkag443 ]

EMD-64578

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local ARP-NCP structure of the ncBAF-nucleosome complex in the apo state

CryoEM

Release date: May 6, 2026
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9uxa
Q-score: 0.385

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ Pubmed: 41657245 DOI: doi:10.1093/nar/gkag092 ]

EMD-64579

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The apo density map of BCL7B-containing ARP module of the human SWI/SNF complex

CryoEM

Release date: May 6, 2026
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 9uxb
Q-score: 0.528

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ Pubmed: 41657245 DOI: doi:10.1093/nar/gkag092 ]

EMD-64580

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The ADP-bound density map of BCL7B-containing ARP module of the human SWI/SNF complex

CryoEM

Release date: May 6, 2026
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9uxc
Q-score: 0.442

Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

Nucleic Acids Res (2026) 54 [ Pubmed: 41657245 DOI: doi:10.1093/nar/gkag092 ]

EMD-64741

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Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with mono-nucleosome

CryoEM

Release date: May 6, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9v2v
Q-score: 0.384

Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao WCH, Pei D, He J

Nucleic Acids Res (2026) 54 [ Pubmed: 42152683 DOI: doi:10.1093/nar/gkag443 ]

EMD-65442

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Cryo-EM Structure of Nipah Virus Polymerase in complex with ERDRP-0519

CryoEM

Release date: April 29, 2026
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 9vxv
Q-score: 0.475

Xue L, Gui J, Gao S, Gao X, Chang T, Pan H, Tang J, Zhang M, Li Z, Zou B, Zhao H, Wang L, Li M, Rong L, Plemper RK, Chen X, He J, Pei R, Zhan P, Xiong X

Cell (2026) 189 pp. 4094- [ DOI: doi:10.1016/j.cell.2026.04.011 Pubmed: 42061399 ]

EMD-65444

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Cryo-EM Structure of Measles Virus Polymerase in complex with ERDRP-0519

CryoEM

Release date: April 29, 2026
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 9vxx
Q-score: 0.49

Xue L, Gui J, Gao S, Gao X, Chang T, Pan H, Tang J, Zhang M, Li Z, Zou B, Zhao H, Wang L, Li M, Rong L, Plemper RK, Chen X, He J, Pei R, Zhan P, Xiong X

Cell (2026) 189 pp. 4094- [ DOI: doi:10.1016/j.cell.2026.04.011 Pubmed: 42061399 ]

EMD-65445

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Cryo-EM Structure of Nipah Virus Polymerase in complex with GL22

CryoEM

Release date: April 29, 2026
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 9vxy
Q-score: 0.47

Xue L, Gui J, Gao S, Gao X, Chang T, Pan H, Tang J, Zhang M, Li Z, Zou B, Zhao H, Wang L, Li M, Rong L, Plemper RK, Chen X, He J, Pei R, Zhan P, Xiong X

Cell (2026) 189 pp. 4094- [ DOI: doi:10.1016/j.cell.2026.04.011 Pubmed: 42061399 ]

Sort by: Download

Showing 1 - 10 of 282. Page 1 of 29

Display:

Statistics

Download

Select database:

EMDB [279]
EMPIAR [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [109]
Severe acute respiratory syndrome coronavirus [72]
Synthetic construct [23]
Campylobacter jejuni [14]
Xenopus laevis [11]
Thogotovirus thogotoense [10]
Mycobacterium tuberculosis [10]
Severe acute respiratory syndrome coronavirus [10]
Saccharomyces cerevisiae [10]
Mus musculus [9]
Drosophila melanogaster [9]
Enterobacteria phage t4 [7]
Tetrahymena thermophila [7]
Mycobacterium tuberculosis [7]
African swine fever virus [6]
Porcine epidemic diarrhea virus [6]
Autographa californica multiple nucleopolyhedrovirus [6]
Nipah virus [5]
(no species) [4]
Scylla serrata reovirus sz-2007 [4]
Bat coronavirus [3]
Vibrio parahaemolyticus [3]
Bos mutus grunniens [3]
Saccharomyces cerevisiae [3]
Nomascus leucogenys [3]
Severe acute respiratory syndrome coronavirus [3]
Kenya bat coronavirus btky72 [3]
Mud crab virus [3]
Rattus norvegicus [2]
Hepatitis b virus [2]
Measles morbillivirus [2]
Staphylococcus aureus [2]
Streptococcus pyogenes [2]
Middle east respiratory syndrome-related coronavirus [2]
Clostridium botulinum [2]
(no species) [2]
Morbillivirus caprinae [2]
Erinaceus hedgehog coronavirus hku31 [2]
Streptococcus pyogenes [2]
Dianlovirus menglaense [2]
Rhinolophus affinis [2]
(no species) [2]
Bacteroides fragilis [2]
Sus scrofa [2]
Tequatrovirus t6 [1]
Semliki forest virus [1]
Synechococcus elongatus [1]
Foot-and-mouth disease virus [1]
Foot-and-mouth disease virus [1]
(no species) [1]
Middle east respiratory syndrome-related coronavirus [1]
Hedgehog coronavirus 1 [1]
Severe acute respiratory syndrome coronavirus [1]
Severe acute respiratory syndrome coronavirus [1]
Severe acute respiratory syndrome coronavirus [1]
Wenzhou tombus-like virus 18 [1]
Hypsugo bat coronavirus hku25 [1]
Firmicutes bacterium am43-11bh [1]
(no species) [1]
Pangolin coronavirus hku4/p251t/pangolin/2018 [1]
Arabidopsis thaliana [1]
Roseiflexus castenholzii [1]
Clostridium botulinum [1]
Neisseria meningitidis [1]
Rhinolophus landeri [1]
Escherichia coli [1]
Rhizophagus irregularis [1]
Zika virus [1]
Morbillivirus hominis [1]
Vibrio parahaemolyticus [1]
Spodoptera frugiperda [1]
Haemophilus parainfluenzae [1]
Bat coronavirus bm48-31/bgr/2008 [1]
Streptococcus sp. f0441 [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

He J [279]
Xiong X [108]
Li Z [100]
Liu B [90]
Chen X [88]
Zhang Y [77]
Gao X [76]
Wang J [73]
Chen Q [64]
Wang Q [61]
Liu Y [57]
Chen L [53]
Zhao H [48]
Yan Q [47]
Zhao J [46]
Ma Y [41]
Zhang Q [39]
Li M [37]
Wang P [37]
Zhang X [37]
Wang M [35]
Li J [31]
Wang C [31]
Wang X [31]
Chen J [30]
Chen Y [29]
Su M [29]
Yuan H [29]
Zhu Y [29]
Li H [28]
Zou B [28]
He Y [27]
Niu X [27]
Zheng H [27]
Guan J [26]
Liu J [26]
Wang Z [26]
Zhang J [26]
Huang Y [25]
Gao Y [23]
Liu L [23]
Shi J [23]
Wang Y [23]
Zhao X [23]
Liang H [22]
Pei R [22]
Habib G [21]
Li S [21]
Xue L [21]
Fu L [20]
Huang X [20]
Jia X [20]
Zhang H [20]
Chang T [19]
Li F [19]
Lin X [19]
Sun L [19]
Sun S [19]
Zhou P [19]
Dong S [18]
He P [18]
Hou R [18]
Liu C [18]
Liu X [18]
Briggs JAG [17]
Carter AP [17]
Ciazynska KA [17]
Qu K [17]
Wu J [17]
Xie Y [17]
Zhu S [17]
Zhou Y [16]
Guo L [15]
Hu P [15]
Jin L [15]
Li W [15]
Yang Y [15]
Zhong X [15]
Rasheed N [14]
She J [14]
Xie C [14]
Zhao Y [14]
Baker MAB [13]
Botting JM [13]
Chu H [13]
Feng X [13]
Gao B [13]
Guo J [13]
Hua C [13]
Jiang S [13]
Lara-tejero M [13]
Li K [13]
Long Y [13]
Lu L [13]
Mao Q [13]
Mayer CT [13]
Oliveira TY [13]
Qiu Y [13]
Qiu YN [13]
Tachiyama S [13]

Author by ORCID

Xiong X [103]
He J [78]
Chen X [48]
Gao X [37]
Chen L [28]
Liu Y [20]
Zhou P [19]
Habib G [19]
Wang J [19]
Yuan H [19]
Ma Y [19]
Zhao J [18]
Carter AP [17]
Qu K [17]
Ciazynska KA [17]
Briggs JAG [17]
Rasheed N [14]
Gao X [13]
Wang Q [13]
Jiang S [13]
Sun L [13]
Mayer CT [13]
Zhao X [13]
Wang Z [13]
Lu L [13]
Xie Y [13]
Oliveira TY [13]
Xie M [13]
Wu F [13]
Yan Q [13]
Wang P [13]
Chu H [13]
Xia R [13]
She J [12]
Lara-tejero M [12]
Gao B [12]
Baker MAB [12]
Gong P [12]
Liu J [12]
Botting JM [12]
Zhang Q [11]
Jia X [11]
Zhang X [10]
Wang P [10]
Shi Z [10]
Yu H [10]
Wang C [10]
Tang X [10]
Liu L [10]
Bao X [10]
Tang P [10]
Liu C [10]
Shi J [10]
Li F [10]
Wang M [10]
Wang X [10]
Chao WCH [10]
Li Z [10]
Shi ZL [9]
Ma J [9]
Huang Y [9]
Wang J [9]
Su S [9]
Li Z [9]
Lei M [7]
Wu J [7]
Zhang X [7]
Huang C [7]
Ma Y [7]
Wang Z [6]
Baker ML [6]
Zhu Y [6]
Wang HW [6]
Venkannagari H [6]
Qian H [6]
Sun F [6]
He J [6]
Guo J [6]
Li S [6]
Liu N [6]
Zhao Y [6]
He J [6]
Sun L [6]
Huang Y [6]
Gao GF [5]
Qi J [5]
Liu J [5]
Chen J [4]
Zhou Q [4]
Zhu S [4]
Kaelber JT [4]
Jiang W [4]
Li N [4]
Zhang Q [4]
Xue L [4]
Yang H [4]
Wen H [4]
Yang Y [4]
Diffley JFX [3]
Mao C [3]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links