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primary_citation_author:"Davis RE"

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Current Database

  • EMDB [6]

Current status

  • REL [6]

Sample type

  • Complex [6]
  • Protein [5]
  • DNA [3]

Organism

  • Saccharomyces cerevisiae [3]
  • Chaetomium thermophilum [3]
  • Chaetomium thermophilum [1]

EM Method

  • Single-particle [6]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [2]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 500-1000 kDa [2]
  • 1-2 MDa [1]

Release Date

  • 2021 [3]
  • 2016 [3]

Author by name

  • Bushnell DA [6]
  • Davis RE [6]
  • Kornberg RD [6]
  • Burlingame AL [3]
  • Chen DC [3]
  • Chen DH [3]
  • Mattei PJ [3]
  • Mattoo RUH [3]
  • Nie Y [3]
  • Robinson PJ [3]
  • Trnka MJ [3]
  • Wang C [3]
  • Wang L [3]
  • Wang Y [3]
  • Yuan C [3]
  • Zhang H [3]
  • Zhang HQ [3]

Author by ORCID

  • Mattoo RUH [3]
  • Chen DH [3]
  • Trnka MJ [3]
  • Zhang H [3]

Journal

  • CELL [3]
  • MOL CELL [3]

Software

  • RELION [3]
  • CTFFIND [2]
  • CFTFIND [1]

Microscope

  • FEI TECNAI F20 [3]
  • FEI TITAN KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [6]

Film or detector model

  • GATAN K3 6K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]

External links

  • PDB [6]
  • AlphaFold DB [3]
  • Gene Ontology [3]
  • InterPro [3]
  • PDBe-Kb [3]
  • Pfam [3]
  • UniProt [3]
  • SCOP2 [1]
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EMD-22284
Download Map
3D View
Head-Middle module of Mediator
CryoEM
Release date: March 3, 2021
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6xp5
Q-score: 0.337
Similar entry percentile: 49%

Zhang H, Chen DH, Mattoo RUH, Bushnell DA, Wang Y, Yuan C, Wang L, Wang C, Davis RE, Nie Y, Kornberg RD

Mol Cell (2021) 81 pp. 1781-1788.e4 [ DOI: doi:10.1016/j.molcel.2021.01.022 Pubmed: 33571424 ]

EMD-22397
Download Map
3D View
T module
CryoEM
Release date: March 3, 2021
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 7jmn
Q-score: 0.466
Similar entry percentile: 68%

Zhang H, Chen DH, Mattoo RUH, Bushnell DA, Wang Y, Yuan C, Wang L, Wang C, Davis RE, Nie Y, Kornberg RD

Mol Cell (2021) 81 pp. 1781-1788.e4 [ DOI: doi:10.1016/j.molcel.2021.01.022 Pubmed: 33571424 ]

EMD-22399
Download Map
3D View
Mediator-Pol II complex
CryoEM
Release date: Feb. 24, 2021
Resolution: 4.3 Å
EM Method: Single-particle

Zhang H, Chen DH, Mattoo RUH, Bushnell DA, Wang Y, Yuan C, Wang L, Wang C, Davis RE, Nie Y, Kornberg RD

Mol Cell (2021) 81 pp. 1781-1788.e4 [ DOI: doi:10.1016/j.molcel.2021.01.022 Pubmed: 33571424 ]

EMD-8305
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3D View
Mediator-RNA Polymerase II Pre-Initiation Complex Delta Mediator Tail Focused Refinement
CryoEM
Release date: Sept. 14, 2016
Resolution: 15.3 Å
EM Method: Single-particle
Fitted PDBs: 5sva
Q-score: 0.049
Similar entry percentile: 53%

Robinson PJ, Trnka MJ, Bushnell DA, Davis RE, Mattei PJ, Burlingame AL, Kornberg RD

Cell (2016) 166 pp. 1411-1422.e16 [ Pubmed: 27610567 DOI: doi:10.1016/j.cell.2016.08.050 ]

EMD-8307
Download Map
3D View
Mediator-RNA Polymerase II Pre-Initiation Complex Delta TFIIE-IIH Focused refinement
CryoEM
Release date: Sept. 14, 2016
Resolution: 16.8 Å
EM Method: Single-particle

Robinson PJ, Trnka MJ, Bushnell DA, Davis RE, Mattei PJ, Burlingame AL, Kornberg RD

Cell (2016) 166 pp. 1411-1422.e16 [ Pubmed: 27610567 DOI: doi:10.1016/j.cell.2016.08.050 ]

EMD-8308
Download Map
3D View
Mediator-RNA Polymerase II Pre-Initiation Complex
CryoEM
Release date: Sept. 14, 2016
Resolution: 21.9 Å
EM Method: Single-particle

Robinson PJ, Trnka MJ, Bushnell DA, Davis RE, Mattei PJ, Burlingame AL, Kornberg RD

Cell (2016) 166 pp. 1411-1422.e16 [ Pubmed: 27610567 DOI: doi:10.1016/j.cell.2016.08.050 ]

Sort by: Download
Showing 1 - 6 of 6. Page 1 of 1
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [6]

Current status

  • REL [6]

Sample type

  • Complex [6]
  • Protein [5]
  • DNA [3]

Organism

  • Saccharomyces cerevisiae [3]
  • Chaetomium thermophilum [3]
  • Chaetomium thermophilum [1]

EM Method

  • Single-particle [6]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [2]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 500-1000 kDa [2]
  • 1-2 MDa [1]

Release Date

  • 2021 [3]
  • 2016 [3]

Author by name

  • Bushnell DA [6]
  • Davis RE [6]
  • Kornberg RD [6]
  • Burlingame AL [3]
  • Chen DC [3]
  • Chen DH [3]
  • Mattei PJ [3]
  • Mattoo RUH [3]
  • Nie Y [3]
  • Robinson PJ [3]
  • Trnka MJ [3]
  • Wang C [3]
  • Wang L [3]
  • Wang Y [3]
  • Yuan C [3]
  • Zhang H [3]
  • Zhang HQ [3]

Author by ORCID

  • Mattoo RUH [3]
  • Chen DH [3]
  • Trnka MJ [3]
  • Zhang H [3]

Journal

  • CELL [3]
  • MOL CELL [3]

Software

  • RELION [3]
  • CTFFIND [2]
  • CFTFIND [1]

Microscope

  • FEI TECNAI F20 [3]
  • FEI TITAN KRIOS [3]

Electron Source

  • FIELD EMISSION GUN [6]

Film or detector model

  • GATAN K3 6K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]

External links

  • PDB [6]
  • AlphaFold DB [3]
  • Gene Ontology [3]
  • InterPro [3]
  • PDBe-Kb [3]
  • Pfam [3]
  • UniProt [3]
  • SCOP2 [1]