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natural_source_ncbi_code:"679895"

Filter By

Current Database

  • EMDB [94]

Current status

  • REL [94]

Sample type

  • Complex [93]
  • Protein [62]
  • Ligand [55]
  • RNA [48]
  • Sample [21]
  • Cell [1]

Organism

  • Escherichia coli [94]
  • Escherichia coli [16]
  • Pseudomonas putida [4]
  • Homo sapiens [4]
  • Drosophila melanogaster [3]
  • Escherichia coli [3]
  • Paenibacillus larvae [2]
  • Streptomyces rimosus [2]
  • Enterobacteria phage t4 [2]
  • Synthetic construct [2]
  • Escherichia coli [2]
  • Streptomyces californicus [2]
  • (no species) [2]
  • Sinorhizobium medicae [1]
  • Haloarcula marismortui [1]
  • Myxococcus fulvus [1]
  • 6798959 [1]
  • Drosophila albomicans [1]

EM Method

  • Single-particle [91]
  • Subtomogram averaging [3]

Resolution

  • < 2Å [10]
  • ≥ 2Å and < 3Å [43]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [4]
  • ≥ 30Å [17]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [2]
  • 250-500 kDa [5]
  • 500-1000 kDa [12]
  • 1-2 MDa [12]
  • 2-5 MDa [26]

Release Date

  • 2026 [16]
  • 2025 [4]
  • 2024 [22]
  • 2023 [19]
  • 2022 [5]
  • 2021 [5]
  • 2018 [2]
  • 2014 [21]

Author by name

  • Wilson DN [32]
  • Morici M [26]
  • Beckert B [25]
  • Koller TO [22]
  • Carragher B [21]
  • Greeman CA [21]
  • Lyumkis D [21]
  • Paternoga H [21]
  • Potter C [21]
  • Potter CS [21]
  • Sashital DG [21]
  • Williamson JR [21]
  • Myasnikov AG [19]
  • Bock LV [18]
  • Crowe-mcauliffe C [18]
  • Grubmuller H [15]
  • Novacek J [15]
  • Ishiguro K [13]
  • Miyauchi K [13]
  • Shirouzu M [13]
  • Suzuki T [13]
  • Akiyama N [11]
  • Safdari HA [10]
  • Berger MJ [8]
  • Nagao A [7]
  • Beghiah A [6]
  • Friedrich T [6]
  • Hoeser F [6]
  • Kimura S [6]
  • Kovalova T [6]
  • Saura P [6]
  • Barrass SV [5]
  • Berger M [5]
  • Cecil AJ [5]
  • Collet JF [5]
  • Deghelt M [5]
  • Drabbels M [5]
  • Harder OF [5]
  • Hruby J [5]
  • Impens F [5]
  • Janssens A [5]
  • Kaila VRI [5]
  • Lorenz UJ [5]
  • Mankin A [5]
  • Mowry NJ [5]
  • Nguyen VS [5]
  • Pak AJ [5]
  • Remaut H [5]
  • Straub MS [5]
  • Timmerman E [5]
  • Van Der Verren Se [5]
  • Vazquez-laslop N [5]
  • Yokoyama T [5]
  • Afonina ZA [4]
  • Baymukhametov TN [4]
  • Hanzawa Y [4]
  • Hayashi G [4]
  • Imataka H [4]
  • Inoue K [4]
  • Korepanov A [4]
  • Korepanov AP [4]
  • Koyama K [4]
  • Kravchenko OV [4]
  • Machida K [4]
  • Maksimova E [4]
  • Maksimova EM [4]
  • Mo Y [4]
  • Murayama A [4]
  • Ohira T [4]
  • Okamoto A [4]
  • Sakaguchi Y [4]
  • Soma A [4]
  • Srisuknimit V [4]
  • Stolboushkina EA [4]
  • Vassilenko KS [4]
  • Vu TS [4]
  • Waldor MK [4]
  • Yamashita A [4]
  • Beck M [3]
  • Bulatov T [3]
  • Chiba S [3]
  • Dang T [3]
  • Di Stasi A [3]
  • Fujiwara K [3]
  • Gabrielli S [3]
  • Goemans C [3]
  • Kaur KJ [3]
  • Khusainov I [3]
  • Langer JD [3]
  • Lele DS [3]
  • Mainz A [3]
  • Mardirossian M [3]
  • Raulf K [3]
  • Romanov N [3]
  • Scocchi M [3]
  • Sussmuth RD [3]
  • Turonova B [3]
  • Typas A [3]
  • Welsch S [3]
  • Zimmerli CE [3]

Author by ORCID

  • Wilson DN [29]
  • Sashital DG [21]
  • Morici M [21]
  • Williamson JR [21]
  • Koller TO [18]
  • Paternoga H [17]
  • Bock LV [17]
  • Grubmuller H [15]
  • Myasnikov AG [15]
  • Novacek J [15]
  • Ishiguro K [10]
  • Miyauchi K [10]
  • Shirouzu M [10]
  • Suzuki T [10]
  • Akiyama N [7]
  • Safdari HA [7]
  • Barrass SV [5]
  • Drabbels M [5]
  • Hruby J [5]
  • Straub MS [5]
  • Lorenz UJ [5]
  • Baymukhametov TN [4]
  • Maksimova EM [4]
  • Ohira T [4]
  • Korepanov AP [4]
  • Khusainov I [3]
  • Sussmuth RD [3]
  • Srisuknimit V [3]
  • Yokoyama T [3]
  • Typas A [3]
  • Gabrielli S [3]
  • Dang T [3]
  • Langer JD [3]
  • Fujiwara K [3]
  • Turonova B [3]
  • Goemans C [3]
  • Welsch S [3]
  • Beck M [3]
  • Okamoto A [3]
  • Nagao A [3]
  • Waldor MK [3]
  • Chiba S [3]
  • Kimura S [3]
  • Zimmerli CE [3]
  • Berger M [3]
  • Berger MJ [3]
  • Chou S [2]
  • Conn GL [2]
  • Kaur M [2]
  • Mankin A [2]
  • Plitzko JM [2]
  • Koteva K [2]
  • Dunham CM [2]
  • Wright G [2]
  • Ignatova Z [2]
  • Travin D [2]
  • Vazquez-laslop N [2]
  • Jangra M [2]
  • Gersteuer F [2]
  • Venugopal H [1]
  • Hellwig P [1]
  • Voutsinos M [1]
  • Wohlwend D [1]
  • Friedrich T [1]
  • Muller R [1]
  • Nandi S [1]
  • Moumbock AFA [1]
  • Hantke K [1]
  • Bottcher B [1]
  • Grinter R [1]
  • Zelinskaya N [1]
  • Comstock LR [1]
  • Melin F [1]
  • Rasmussen T [1]
  • Barmada MI [1]
  • Gunther S [1]
  • Li T [1]
  • Harris GM [1]
  • Yang M [1]
  • Munder F [1]
  • Liu X [1]

Journal

  • ELIFE [21]
  • NAT STRUCT MOL BIOL [18]
  • NAT COMMUN [11]
  • BIORXIV [9]
  • TO BE PUBLISHED [9]
  • NAT CHEM BIOL [7]
  • NAT METHODS [5]
  • NATURE [5]
  • INT J MOL SCI [4]
  • ACTA CRYSTALLOGR D STRUCT BIOL [2]
  • MOL CELL [2]
  • NAT MICROBIOL [2]
  • RES SQ [2]
  • BIOMOLECULES [1]
  • J AM CHEM SOC [1]
  • PNAS [1]
  • SCI ADV [1]

Software

  • RELION [32]
  • SPIDER, APPION [17]
  • CRYOSPARC [15]
  • XMIPP, FREALIGN [4]
  • WARP [3]
  • CRYOLO [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [48]
  • TFS KRIOS [20]
  • FEI TECNAI SPIRIT [17]
  • JEOL CRYO ARM 300 [5]
  • FEI TECNAI F20 [4]

Electron Source

  • FIELD EMISSION GUN [77]
  • LAB6 [17]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [22]
  • FEI FALCON IV 4K X 4K [18]
  • GATAN K3 6K X 4K [18]
  • TVIPS TEMCAM-F416 4K X 4K [17]
  • FEI FALCON II 4K X 4K [6]
  • GATAN K2 4K X 4K [4]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 BIOCONTINUUM 6K X 4K [3]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • PDB [94]
  • UniProt [58]
  • AlphaFold DB [57]
  • PDBe-Kb [57]
  • Pfam [57]
  • ChEBI [55]
  • DrugBank [55]
  • ChEMBL [46]
  • Gene Ontology [46]
  • Complex Portal [43]
  • InterPro [40]
  • EMPIAR [16]
Sort by: Download
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EMD-53943
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3D View
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
CryoEM
Release date: May 27, 2026
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 9rfw
Q-score: 0.561

Wright G, Kaur M, Travin D, Berger M, Jangra M, Morici M, Safdari HA, Klepacki D, Wang W, Cook M, Chou S, Guitor A, Koteva K, Xu M, Ejim L, Macneil L, Vazquez-Laslop N, Mankin A, Wilson D

Res Sq (2025) [ Pubmed: 40630547 DOI: doi:10.21203/rs.3.rs-6925047/v1 ]

EMD-54009
Download Map
3D View
Manikomycin bound to the Escherichia coli 70S ribosome
CryoEM
Release date: May 27, 2026
Resolution: 2.45 Å
EM Method: Single-particle
Fitted PDBs: 9rja
Q-score: 0.484

Wright G, Kaur M, Travin D, Berger M, Jangra M, Morici M, Safdari HA, Klepacki D, Wang W, Cook M, Chou S, Guitor A, Koteva K, Xu M, Ejim L, Macneil L, Vazquez-Laslop N, Mankin A, Wilson D

Res Sq (2025) [ Pubmed: 40630547 DOI: doi:10.21203/rs.3.rs-6925047/v1 ]

EMD-55844
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3D View
DalDro bound to the initiating Escherichia coli 70S ribosome
CryoEM
Release date: May 13, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9tew
Q-score: 0.55

Berger MJ, Wilson DN

To Be Published

EMD-55845
Download Map
3D View
Dal2 bound to the Escherichia coli 70S ribosome
CryoEM
Release date: May 13, 2026
Resolution: 2.54 Å
EM Method: Single-particle
Fitted PDBs: 9tex
Q-score: 0.611

Berger MJ, Wilson DN

To Be Published

EMD-55849
Download Map
3D View
DalDroS bound to the Escherichia coli 50S ribosomal subunit
CryoEM
Release date: May 13, 2026
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 9tez
Q-score: 0.584

Berger MJ, Wilson DN

To Be Published

EMD-55748
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3D View
E. coli Complex I WT purified in LMNG
CryoEM
Release date: May 6, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9taj
Q-score: 0.447

Beghiah A, Saura P, Kovalova T, Hoeser F, Friedrich T, Kaila VRI

To Be Published

EMD-55749
Download Map
3D View
Local refinement of E. coli Complex I WT membrane domain in LMNG
CryoEM
Release date: May 6, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9tak
Q-score: 0.562

Beghiah A, Saura P, Kovalova T, Hoeser F, Friedrich T, Kaila VRI

To Be Published

EMD-55750
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3D View
Local refinement of E. coli Complex I WT hydrophilic domain in LMNG
CryoEM
Release date: May 6, 2026
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 9tal
Q-score: 0.588

Beghiah A, Saura P, Kovalova T, Hoeser F, Friedrich T, Kaila VRI

To Be Published

EMD-55751
Download Map
3D View
E. coli Complex I D79N NuoA mutant purified in LMNG
CryoEM
Release date: May 6, 2026
Resolution: 2.96 Å
EM Method: Single-particle
Fitted PDBs: 9tam
Q-score: 0.38

Beghiah A, Saura P, Kovalova T, Hoeser F, Friedrich T, Kaila V

To Be Published

EMD-55752
Download Map
3D View
Local refinement of E. coli Complex I D79N NuoA mutant hydrophilic domain in LMNG
CryoEM
Release date: May 6, 2026
Resolution: 2.59 Å
EM Method: Single-particle
Fitted PDBs: 9tan
Q-score: 0.593

Beghiah A, Saura P, Kovalova T, Hoeser F, Friedrich F, Kaila VRI

To Be Published

Sort by: Download
Showing 1 - 10 of 94. Page 1 of 10
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [94]

Current status

  • REL [94]

Sample type

  • Complex [93]
  • Protein [62]
  • Ligand [55]
  • RNA [48]
  • Sample [21]
  • Cell [1]

Organism

  • Escherichia coli [94]
  • Escherichia coli [16]
  • Pseudomonas putida [4]
  • Homo sapiens [4]
  • Drosophila melanogaster [3]
  • Escherichia coli [3]
  • Paenibacillus larvae [2]
  • Streptomyces rimosus [2]
  • Enterobacteria phage t4 [2]
  • Synthetic construct [2]
  • Escherichia coli [2]
  • Streptomyces californicus [2]
  • (no species) [2]
  • Sinorhizobium medicae [1]
  • Haloarcula marismortui [1]
  • Myxococcus fulvus [1]
  • 6798959 [1]
  • Drosophila albomicans [1]

EM Method

  • Single-particle [91]
  • Subtomogram averaging [3]

Resolution

  • < 2Å [10]
  • ≥ 2Å and < 3Å [43]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [4]
  • ≥ 30Å [17]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [2]
  • 250-500 kDa [5]
  • 500-1000 kDa [12]
  • 1-2 MDa [12]
  • 2-5 MDa [26]

Release Date

  • 2026 [16]
  • 2025 [4]
  • 2024 [22]
  • 2023 [19]
  • 2022 [5]
  • 2021 [5]
  • 2018 [2]
  • 2014 [21]

Author by name

  • Wilson DN [32]
  • Morici M [26]
  • Beckert B [25]
  • Koller TO [22]
  • Carragher B [21]
  • Greeman CA [21]
  • Lyumkis D [21]
  • Paternoga H [21]
  • Potter C [21]
  • Potter CS [21]
  • Sashital DG [21]
  • Williamson JR [21]
  • Myasnikov AG [19]
  • Bock LV [18]
  • Crowe-mcauliffe C [18]
  • Grubmuller H [15]
  • Novacek J [15]
  • Ishiguro K [13]
  • Miyauchi K [13]
  • Shirouzu M [13]
  • Suzuki T [13]
  • Akiyama N [11]
  • Safdari HA [10]
  • Berger MJ [8]
  • Nagao A [7]
  • Beghiah A [6]
  • Friedrich T [6]
  • Hoeser F [6]
  • Kimura S [6]
  • Kovalova T [6]
  • Saura P [6]
  • Barrass SV [5]
  • Berger M [5]
  • Cecil AJ [5]
  • Collet JF [5]
  • Deghelt M [5]
  • Drabbels M [5]
  • Harder OF [5]
  • Hruby J [5]
  • Impens F [5]
  • Janssens A [5]
  • Kaila VRI [5]
  • Lorenz UJ [5]
  • Mankin A [5]
  • Mowry NJ [5]
  • Nguyen VS [5]
  • Pak AJ [5]
  • Remaut H [5]
  • Straub MS [5]
  • Timmerman E [5]
  • Van Der Verren Se [5]
  • Vazquez-laslop N [5]
  • Yokoyama T [5]
  • Afonina ZA [4]
  • Baymukhametov TN [4]
  • Hanzawa Y [4]
  • Hayashi G [4]
  • Imataka H [4]
  • Inoue K [4]
  • Korepanov A [4]
  • Korepanov AP [4]
  • Koyama K [4]
  • Kravchenko OV [4]
  • Machida K [4]
  • Maksimova E [4]
  • Maksimova EM [4]
  • Mo Y [4]
  • Murayama A [4]
  • Ohira T [4]
  • Okamoto A [4]
  • Sakaguchi Y [4]
  • Soma A [4]
  • Srisuknimit V [4]
  • Stolboushkina EA [4]
  • Vassilenko KS [4]
  • Vu TS [4]
  • Waldor MK [4]
  • Yamashita A [4]
  • Beck M [3]
  • Bulatov T [3]
  • Chiba S [3]
  • Dang T [3]
  • Di Stasi A [3]
  • Fujiwara K [3]
  • Gabrielli S [3]
  • Goemans C [3]
  • Kaur KJ [3]
  • Khusainov I [3]
  • Langer JD [3]
  • Lele DS [3]
  • Mainz A [3]
  • Mardirossian M [3]
  • Raulf K [3]
  • Romanov N [3]
  • Scocchi M [3]
  • Sussmuth RD [3]
  • Turonova B [3]
  • Typas A [3]
  • Welsch S [3]
  • Zimmerli CE [3]

Author by ORCID

  • Wilson DN [29]
  • Sashital DG [21]
  • Morici M [21]
  • Williamson JR [21]
  • Koller TO [18]
  • Paternoga H [17]
  • Bock LV [17]
  • Grubmuller H [15]
  • Myasnikov AG [15]
  • Novacek J [15]
  • Ishiguro K [10]
  • Miyauchi K [10]
  • Shirouzu M [10]
  • Suzuki T [10]
  • Akiyama N [7]
  • Safdari HA [7]
  • Barrass SV [5]
  • Drabbels M [5]
  • Hruby J [5]
  • Straub MS [5]
  • Lorenz UJ [5]
  • Baymukhametov TN [4]
  • Maksimova EM [4]
  • Ohira T [4]
  • Korepanov AP [4]
  • Khusainov I [3]
  • Sussmuth RD [3]
  • Srisuknimit V [3]
  • Yokoyama T [3]
  • Typas A [3]
  • Gabrielli S [3]
  • Dang T [3]
  • Langer JD [3]
  • Fujiwara K [3]
  • Turonova B [3]
  • Goemans C [3]
  • Welsch S [3]
  • Beck M [3]
  • Okamoto A [3]
  • Nagao A [3]
  • Waldor MK [3]
  • Chiba S [3]
  • Kimura S [3]
  • Zimmerli CE [3]
  • Berger M [3]
  • Berger MJ [3]
  • Chou S [2]
  • Conn GL [2]
  • Kaur M [2]
  • Mankin A [2]
  • Plitzko JM [2]
  • Koteva K [2]
  • Dunham CM [2]
  • Wright G [2]
  • Ignatova Z [2]
  • Travin D [2]
  • Vazquez-laslop N [2]
  • Jangra M [2]
  • Gersteuer F [2]
  • Venugopal H [1]
  • Hellwig P [1]
  • Voutsinos M [1]
  • Wohlwend D [1]
  • Friedrich T [1]
  • Muller R [1]
  • Nandi S [1]
  • Moumbock AFA [1]
  • Hantke K [1]
  • Bottcher B [1]
  • Grinter R [1]
  • Zelinskaya N [1]
  • Comstock LR [1]
  • Melin F [1]
  • Rasmussen T [1]
  • Barmada MI [1]
  • Gunther S [1]
  • Li T [1]
  • Harris GM [1]
  • Yang M [1]
  • Munder F [1]
  • Liu X [1]

Journal

  • ELIFE [21]
  • NAT STRUCT MOL BIOL [18]
  • NAT COMMUN [11]
  • BIORXIV [9]
  • TO BE PUBLISHED [9]
  • NAT CHEM BIOL [7]
  • NAT METHODS [5]
  • NATURE [5]
  • INT J MOL SCI [4]
  • ACTA CRYSTALLOGR D STRUCT BIOL [2]
  • MOL CELL [2]
  • NAT MICROBIOL [2]
  • RES SQ [2]
  • BIOMOLECULES [1]
  • J AM CHEM SOC [1]
  • PNAS [1]
  • SCI ADV [1]

Software

  • RELION [32]
  • SPIDER, APPION [17]
  • CRYOSPARC [15]
  • XMIPP, FREALIGN [4]
  • WARP [3]
  • CRYOLO [1]
  • UCSF CHIMERAX [1]

Microscope

  • FEI TITAN KRIOS [48]
  • TFS KRIOS [20]
  • FEI TECNAI SPIRIT [17]
  • JEOL CRYO ARM 300 [5]
  • FEI TECNAI F20 [4]

Electron Source

  • FIELD EMISSION GUN [77]
  • LAB6 [17]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [22]
  • FEI FALCON IV 4K X 4K [18]
  • GATAN K3 6K X 4K [18]
  • TVIPS TEMCAM-F416 4K X 4K [17]
  • FEI FALCON II 4K X 4K [6]
  • GATAN K2 4K X 4K [4]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 BIOCONTINUUM 6K X 4K [3]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • PDB [94]
  • UniProt [58]
  • AlphaFold DB [57]
  • PDBe-Kb [57]
  • Pfam [57]
  • ChEBI [55]
  • DrugBank [55]
  • ChEMBL [46]
  • Gene Ontology [46]
  • Complex Portal [43]
  • InterPro [40]
  • EMPIAR [16]