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natural_source_ncbi_code:"1869227"

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Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [6]
  • Protein [6]
  • RNA [6]
  • Ligand [4]
  • Cell [2]
  • DNA [2]

Organism

  • Bacterium [8]
  • Lachnospiraceae bacterium nd2006 [2]
  • Synthetic construct [1]

EM Method

  • Single-particle [6]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 100-250 kDa [4]
  • 500-1000 kDa [2]

Release Date

  • 2026 [2]
  • 2025 [4]
  • 2021 [2]

Author by name

  • Baca CF [4]
  • Hickling JH [4]
  • Majumder P [4]
  • Marraffini LA [4]
  • Patel DJ [4]
  • Alfonse L [2]
  • Ditommaso T [2]
  • Gaisin V [2]
  • Gaisin VA [2]
  • Garrity AJ [2]
  • Gorlenko VM [2]
  • Hallsworth JE [2]
  • Klyukina AA [2]
  • Kobayashi TA [2]
  • Koonin EV [2]
  • Maben Z [2]
  • Makarova KS [2]
  • Merkel AY [2]
  • Messina E [2]
  • Morinaga H [2]
  • Munoz G [2]
  • Nureki O [2]
  • Omura SN [2]
  • Onishi K [2]
  • Ornstein A [2]
  • Pilhofer M [2]
  • Shmakov SA [2]
  • Tikhonova EN [2]
  • Yakimov MM [2]

Author by ORCID

  • Baca CF [4]
  • Majumder P [4]
  • Marraffini LA [4]
  • Patel DJ [4]
  • Hickling JH [4]
  • Klyukina AA [2]
  • Hallsworth JE [2]
  • Messina E [2]
  • Gaisin VA [2]
  • Pilhofer M [2]
  • Tikhonova EN [2]
  • Merkel AY [2]
  • Yakimov MM [2]

Journal

  • SCIENCE [4]
  • ENVIRON MICROBIOL [2]
  • TO BE PUBLISHED [2]

Software

  • CRYOSPARC [2]
  • IMOD [2]

Microscope

  • TFS KRIOS [6]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • FEI FALCON IV 4K X 4K [3]
  • GATAN K3 6K X 4K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • PDB [6]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]
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Showing 1 - 8 of 8. Page 1 of 1
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EMD-69297
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Cryo-EM structure of the UnCas12m4a-crRNA-tgDNA ternary complex in the TS-cleaving state
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 23vu
Q-score: 0.623
Similar entry percentile: 91%

Morinaga H, Omura SN, Alfonse L, Ornstein A, Kobayashi TA, Onishi K, Makarova KS, Shmakov SA, Munoz G, Garrity AJ, DiTommaso T, Koonin EV, Maben Z, Nureki O

To Be Published

EMD-69298
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3D View
Cryo-EM structure of the UnCas12m4a-crRNA-tgDNA ternary complex in the NTS-cleaving state
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 23vv
Q-score: 0.581
Similar entry percentile: 86%

Morinaga H, Omura SN, Alfonse L, Ornstein A, Kobayashi TA, Onishi K, Makarova KS, Shmakov SA, Munoz G, Garrity AJ, DiTommaso T, Koonin EV, Maben Z, Nureki O

To Be Published

EMD-48629
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Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Pentagonal filament assembly
CryoEM
Release date: April 16, 2025
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9mud

Baca CF, Majumder P, Hickling JH, Patel DJ, Marraffini LA

Science (2025) 388 pp. eadv9045-eadv9045 [ Pubmed: 40208959 DOI: doi:10.1126/science.adv9045 ]

EMD-48630
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Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Pentagonal filament assembly in the presence of NAD ADPR modelled
CryoEM
Release date: April 16, 2025
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 9mue
Q-score: 0.416
Similar entry percentile: 70%

Baca CF, Majumder P, Hickling JH, Patel DJ, Marraffini LA

Science (2025) 388 pp. eadv9045-eadv9045 [ Pubmed: 40208959 DOI: doi:10.1126/science.adv9045 ]

EMD-48639
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Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Pentagonal filament assembly in the presence of NAD analog BAD
CryoEM
Release date: April 16, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9muo
Q-score: 0.43
Similar entry percentile: 35%

Baca CF, Majumder P, Hickling JH, Patel DJ, Marraffini LA

Science (2025) 388 pp. eadv9045-eadv9045 [ Pubmed: 40208959 DOI: doi:10.1126/science.adv9045 ]

EMD-48698
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Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Trigonal filament assembly
CryoEM
Release date: April 16, 2025
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9mw9
Q-score: 0.448
Similar entry percentile: 30%

Baca CF, Majumder P, Hickling JH, Patel DJ, Marraffini LA

Science (2025) 388 pp. eadv9045-eadv9045 [ Pubmed: 40208959 DOI: doi:10.1126/science.adv9045 ]

EMD-13729
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Cryo-electron tomogram of a single cell of Candidatus Absconditicoccus praedator
CryoEM
Release date: Nov. 24, 2021
EM Method: Tomography

Yakimov MM, Merkel AY, Gaisin VA, Pilhofer M, Messina E, Hallsworth JE, Klyukina AA, Tikhonova EN, Gorlenko VM

Environ Microbiol (2022) 24 pp. 30-49 [ Pubmed: 34750952 DOI: doi:10.1111/1462-2920.15823 ]

EMD-13730
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3D View
Cryo-electron tomography of an attached epibiotic cell of Ca. Absconditicoccus predator
CryoEM
Release date: Nov. 24, 2021
EM Method: Tomography

Yakimov MM, Merkel AY, Gaisin VA, Pilhofer M, Messina E, Hallsworth JE, Klyukina AA, Tikhonova EN, Gorlenko VM

Environ Microbiol (2022) 24 pp. 30-49 [ Pubmed: 34750952 DOI: doi:10.1111/1462-2920.15823 ]

Sort by: Download
Showing 1 - 8 of 8. Page 1 of 1
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [6]
  • Protein [6]
  • RNA [6]
  • Ligand [4]
  • Cell [2]
  • DNA [2]

Organism

  • Bacterium [8]
  • Lachnospiraceae bacterium nd2006 [2]
  • Synthetic construct [1]

EM Method

  • Single-particle [6]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 100-250 kDa [4]
  • 500-1000 kDa [2]

Release Date

  • 2026 [2]
  • 2025 [4]
  • 2021 [2]

Author by name

  • Baca CF [4]
  • Hickling JH [4]
  • Majumder P [4]
  • Marraffini LA [4]
  • Patel DJ [4]
  • Alfonse L [2]
  • Ditommaso T [2]
  • Gaisin V [2]
  • Gaisin VA [2]
  • Garrity AJ [2]
  • Gorlenko VM [2]
  • Hallsworth JE [2]
  • Klyukina AA [2]
  • Kobayashi TA [2]
  • Koonin EV [2]
  • Maben Z [2]
  • Makarova KS [2]
  • Merkel AY [2]
  • Messina E [2]
  • Morinaga H [2]
  • Munoz G [2]
  • Nureki O [2]
  • Omura SN [2]
  • Onishi K [2]
  • Ornstein A [2]
  • Pilhofer M [2]
  • Shmakov SA [2]
  • Tikhonova EN [2]
  • Yakimov MM [2]

Author by ORCID

  • Baca CF [4]
  • Majumder P [4]
  • Marraffini LA [4]
  • Patel DJ [4]
  • Hickling JH [4]
  • Klyukina AA [2]
  • Hallsworth JE [2]
  • Messina E [2]
  • Gaisin VA [2]
  • Pilhofer M [2]
  • Tikhonova EN [2]
  • Merkel AY [2]
  • Yakimov MM [2]

Journal

  • SCIENCE [4]
  • ENVIRON MICROBIOL [2]
  • TO BE PUBLISHED [2]

Software

  • CRYOSPARC [2]
  • IMOD [2]

Microscope

  • TFS KRIOS [6]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • FEI FALCON IV 4K X 4K [3]
  • GATAN K3 6K X 4K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • PDB [6]
  • ChEBI [3]
  • ChEMBL [3]
  • DrugBank [3]