Edit your search query here and hit Return to execute it:
natural_source_ncbi_code:"12242"

Filter By

Current Database

  • EMDB [31]

Current status

  • REL [31]

Sample type

  • Virus [29]
  • Sample [15]
  • RNA [7]
  • Protein [5]
  • Complex [2]

Organism

  • Tobacco mosaic virus [31]
  • Tobacco mosaic virus [4]
  • Barley stripe mosaic virus [2]

EM Method

  • Helical reconstruction [24]
  • Single-particle [5]
  • Subtomogram averaging [1]
  • Tomography [1]

Resolution

  • < 2Å [4]
  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [11]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 0-50 kDa [1]
  • 250-500 kDa [1]
  • 500-1000 kDa [5]
  • 2-5 MDa [2]

Release Date

  • 2026 [3]
  • 2024 [3]
  • 2023 [2]
  • 2022 [4]
  • 2021 [2]
  • 2020 [1]
  • 2019 [1]
  • 2015 [3]
  • 2014 [10]
  • 2010 [1]
  • 2007 [1]

Author by name

  • Sachse C [16]
  • Jakobi AJ [12]
  • Bharat TA [10]
  • Bharat TAM [10]
  • Fromm SA [10]
  • Hagen WJ [10]
  • Hagen WJH [10]
  • Mohammed I [5]
  • Pechnikova EV [5]
  • Stahlberg H [5]
  • Leidl ML [4]
  • Mann D [4]
  • Muller-caspary K [4]
  • Radecke J [4]
  • Beckers M [3]
  • Bosch EGT [3]
  • Chinmaya KV [3]
  • Clare DK [3]
  • Egoavil R [3]
  • Lazic I [3]
  • Orlova EV [3]
  • Wirix M [3]
  • De Haas F [3]
  • Evers WH [2]
  • Ferreira RC [2]
  • Fotiadis D [2]
  • Grigorieff N [2]
  • Harder D [2]
  • Huber ST [2]
  • Huijink R [2]
  • Kube M [2]
  • Kumar V [2]
  • Makarov V [2]
  • Makarov VV [2]
  • Pechnikova E [2]
  • Sarajlic E [2]
  • Skurat E [2]
  • Skurat EV [2]
  • Sokolova OS [2]
  • Solovyev AG [2]
  • Weis F [2]
  • Albiez S [1]
  • Beulen BWAMM [1]
  • Bhella D [1]
  • Bisikalo K [1]
  • Bobe D [1]
  • Braun T [1]
  • Bukharova T [1]
  • Burton-smith RN [1]
  • Butcher SJ [1]
  • Chen JZ [1]
  • Chen W [1]
  • Coureux PD [1]
  • Di Fabrizio M [1]
  • Dietrich L [1]
  • Dobias F [1]
  • Domanska A [1]
  • Dong J [1]
  • Effantin G [1]
  • Ekundayo B [1]
  • Eng ET [1]
  • Fandrich M [1]
  • Filopoulou A [1]
  • Flot D [1]
  • Giraud T [1]
  • Grininger M [1]
  • Guerrero-ferreira RC [1]
  • Henderikx RJM [1]
  • Hons M [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Kovacik L [1]
  • Kucukoglu B [1]
  • Kudryashev M [1]
  • Laanto E [1]
  • Lak B [1]
  • Lau K [1]
  • Leonard GA [1]
  • Love AJ [1]
  • Ludig D [1]
  • Mcgeachy K [1]
  • Miller J [1]
  • Momoh J [1]
  • Mueller-dieckmann C [1]
  • Murata K [1]
  • Myasnikov A [1]
  • Nazarov S [1]
  • Oksanen HM [1]
  • Oliva P [1]
  • Ophus C [1]
  • Owji AP [1]
  • Peters PJ [1]
  • Ribet SM [1]
  • Righetto R [1]
  • Rima L [1]
  • Rohou A [1]
  • Sanchez RM [1]
  • Schmidli C [1]
  • Schoehn G [1]
  • Shahzad S [1]

Author by ORCID

  • Sachse C [13]
  • Jakobi AJ [10]
  • Hagen WJ [8]
  • Bharat TA [8]
  • Fromm SA [8]
  • Leidl ML [4]
  • Mann D [4]
  • Lazic I [3]
  • Beckers M [3]
  • Clare DK [3]
  • Orlova EV [3]
  • Solovyev AG [2]
  • Stahlberg H [2]
  • Grigorieff N [2]
  • Evers WH [2]
  • Weis F [2]
  • Skurat EV [2]
  • Huber ST [2]
  • Sokolova OS [2]
  • Leonard GA [1]
  • Butcher SJ [1]
  • Mohammed I [1]
  • Varnavides G [1]
  • Filopoulou A [1]
  • Ludig D [1]
  • Miller J [1]
  • Williams PA [1]
  • Schoehn G [1]
  • Muller-caspary K [1]
  • Peters PJ [1]
  • Guerrero-ferreira RC [1]
  • Domanska A [1]
  • Stroupe ME [1]
  • Zhang Y [1]
  • Svensson O [1]
  • Effantin G [1]
  • Bobe D [1]
  • Bisikalo K [1]
  • Eng ET [1]
  • Hons M [1]
  • Lau K [1]
  • Braun T [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Chinmaya KV [1]
  • Di Fabrizio M [1]
  • Ekundayo B [1]
  • Kube M [1]
  • Mohammed I [1]
  • Radecke J [1]
  • Stahlberg H [1]
  • Ophus C [1]
  • Myasnikov A [1]
  • Oksanen HM [1]
  • Kudryashev M [1]
  • Mueller-dieckmann C [1]

Journal

  • J STRUCT BIOL [12]
  • TO BE PUBLISHED [6]
  • BIORXIV [3]
  • NAT METHODS [3]
  • ACTA CRYSTALLOGR D STRUCT BIOL [2]
  • ELIFE [2]
  • J MOL BIOL [2]
  • NAT COMMUN [2]
  • STRUCTURE [2]
  • ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
  • PNAS [1]

Software

  • SPRING [10]
  • RELION [9]
  • CRYOSPARC [5]
  • EMAN, IMAGIC, SPIDER [2]
  • CHIMERA AND COOT [1]
  • CTFFIND [1]
  • FREALIX [1]
  • IMOD [1]
  • SPIDER [1]
  • SPIDER, IMAGIC [1]
  • XPLOR [1]

Microscope

  • FEI TITAN KRIOS [19]
  • TFS KRIOS [4]
  • FEI POLARA 300 [3]
  • FEI TECNAI F30 [2]
  • JEOL 3200FSC [2]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [31]

Film or detector model

  • FEI FALCON II 4K X 4K [9]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • OTHER [4]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]
  • KODAK SO-163 FILM [2]
  • DECTRIS ELA 1K X 0.5K [1]
  • DIRECT ELECTRON APOLLO 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN K2 QUANTUM 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [31]
  • EMPIAR [16]
  • UniProt [5]
  • PDBe-Kb [4]
  • Gene Ontology [3]
  • InterPro [3]
  • Pfam [3]
Sort by: Download
Showing 1 - 10 of 31. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-57762
Download Map
3D View
TMV Map using Pulsed Illumination
CryoEM
Release date: May 6, 2026
Resolution: 5.62 Å
EM Method: Single-particle

Kumar V, Radecke J, Chinmaya KV, Mohammed I, Ferreira RC, Harder D, Fotiadis D, Stahlberg H

To Be Published

EMD-57764
Download Map
3D View
TMV Map using Random Conventional Illumination
CryoEM
Release date: May 6, 2026
Resolution: 3.45 Å
EM Method: Single-particle

Kumar V, Radecke J, Chinmaya KV, Mohammed I, Ferreira RC, Harder D, Fotiadis D, Stahlberg H

To Be Published

EMD-55006
Download Map
3D View
Cryo-EM structure of Tobacco Mosaic Virus TMV prepared using the cryoWriter automated grid preparation system with spiral writing.
CryoEM
Release date: Feb. 4, 2026
Resolution: 1.83 Å
EM Method: Helical reconstruction

Chinmaya KV, Ekundayo B, Di Fabrizio M, Mohammed I, Radecke J, Stahlberg H, Kube M

To Be Published

EMD-39712
Download Map
3D View
1.4A Tobacco Mosaic Virus CryoSPARC processing from Falcon 4 data
CryoEM
Release date: May 8, 2024
Resolution: 1.43 Å
EM Method: Helical reconstruction

Burton-Smith RN, Murata K

To Be Published

EMD-19885
Download Map
3D View
Raw data
EMPIAR-12233 EMPIAR-12234 EMPIAR-12236
Low-dose cryo-electron ptychographic reconstruction of TMV recorded with CSA of 6.1 mrad
CryoEM
Release date: April 24, 2024
Resolution: 6.4 Å
EM Method: Helical reconstruction

Kucukoglu B, Mohammed I, Guerrero-Ferreira RC, Ribet SM, Varnavides G, Leidl ML, Lau K, Nazarov S, Myasnikov A, Kube M, Radecke J, Sachse C, Muller-Caspary K, Ophus C, Stahlberg H

Nat Commun (2024) 15 pp. 8062-8062 [ Pubmed: 39277607 DOI: doi:10.1038/s41467-024-52403-5 ]

EMD-19489
Download Map
3D View
Tobacco mosaic virus from scanning transmission electron microscopy at CSA 2.0 mrad
CryoEM
Release date: March 27, 2024
Resolution: 5.4 Å
EM Method: Helical reconstruction

Henderikx RJM, Mann D, Domanska A, Dong J, Shahzad S, Lak B, Filopoulou A, Ludig D, Grininger M, Momoh J, Laanto E, Oksanen HM, Bisikalo K, Williams PA, Butcher SJ, Peters PJ, Beulen BWAMM

Acta Crystallogr D Struct Biol (2024) 80 pp. 232-246 [ Pubmed: 38488730 DOI: doi:10.1107/S2059798324001852 ]

EMD-41924
Download Map
3D View
Raw data
EMPIAR-11693
Structure of Tobacco Mosaic Virus from a multi-species dataset
CryoEM
Release date: Oct. 4, 2023
Resolution: 2.4 Å
EM Method: Helical reconstruction

Bobe D, Kopylov M, Miller J, Owji AP, Eng ET

Acta Crystallogr F Struct Biol Commun (2024) 80 pp. 320-327 [ DOI: doi:10.1107/S2053230X24010318 Pubmed: 39494502 ]

EMD-16572
Download Map
3D View
Raw data
EMPIAR-11404
1.85 angstrom resolution cryo-EM reconstruction of tobacco mosaic virus, imaged on a JEOL CryoARM 300 with Direct Electron Apollo camera.
CryoEM
Release date: Feb. 8, 2023
Resolution: 1.85 Å
EM Method: Helical reconstruction

Bhella D, Love AJ, Streetley J, Taliansky M, McGeachy K, Bukharova T

To Be Published

EMD-4928
Download Map
3D View
Cryo-EM reconstruction of TMV coat protein
CryoEM
Release date: Nov. 23, 2022
Resolution: 2.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 6rlp
Q-score: 0.665

Kandiah E, Giraud T, de Maria Antolinos A, Dobias F, Effantin G, Flot D, Hons M, Schoehn G, Susini J, Svensson O, Leonard GA, Mueller-Dieckmann C

Acta Crystallogr D Struct Biol (2019) 75 pp. 528-535 [ DOI: doi:10.1107/S2059798319006880 Pubmed: 31205015 ]

EMD-13778
Download Map
3D View
cryo iDPC-STEM structure recorded with CSA 2.0
CryoEM
Release date: Sept. 21, 2022
Resolution: 6.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 7q22
Q-score: 0.102

Lazic I, Wirix M, Leidl ML, de Haas F, Mann D, Beckers M, Pechnikova EV, Muller-Caspary K, Egoavil R, Bosch EGT, Sachse C

Nat Methods (2022) 19 pp. 1126-1136 [ DOI: doi:10.1038/s41592-022-01586-0 Pubmed: 36064775 ]

Sort by: Download
Showing 1 - 10 of 31. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [31]

Current status

  • REL [31]

Sample type

  • Virus [29]
  • Sample [15]
  • RNA [7]
  • Protein [5]
  • Complex [2]

Organism

  • Tobacco mosaic virus [31]
  • Tobacco mosaic virus [4]
  • Barley stripe mosaic virus [2]

EM Method

  • Helical reconstruction [24]
  • Single-particle [5]
  • Subtomogram averaging [1]
  • Tomography [1]

Resolution

  • < 2Å [4]
  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [11]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [3]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 0-50 kDa [1]
  • 250-500 kDa [1]
  • 500-1000 kDa [5]
  • 2-5 MDa [2]

Release Date

  • 2026 [3]
  • 2024 [3]
  • 2023 [2]
  • 2022 [4]
  • 2021 [2]
  • 2020 [1]
  • 2019 [1]
  • 2015 [3]
  • 2014 [10]
  • 2010 [1]
  • 2007 [1]

Author by name

  • Sachse C [16]
  • Jakobi AJ [12]
  • Bharat TA [10]
  • Bharat TAM [10]
  • Fromm SA [10]
  • Hagen WJ [10]
  • Hagen WJH [10]
  • Mohammed I [5]
  • Pechnikova EV [5]
  • Stahlberg H [5]
  • Leidl ML [4]
  • Mann D [4]
  • Muller-caspary K [4]
  • Radecke J [4]
  • Beckers M [3]
  • Bosch EGT [3]
  • Chinmaya KV [3]
  • Clare DK [3]
  • Egoavil R [3]
  • Lazic I [3]
  • Orlova EV [3]
  • Wirix M [3]
  • De Haas F [3]
  • Evers WH [2]
  • Ferreira RC [2]
  • Fotiadis D [2]
  • Grigorieff N [2]
  • Harder D [2]
  • Huber ST [2]
  • Huijink R [2]
  • Kube M [2]
  • Kumar V [2]
  • Makarov V [2]
  • Makarov VV [2]
  • Pechnikova E [2]
  • Sarajlic E [2]
  • Skurat E [2]
  • Skurat EV [2]
  • Sokolova OS [2]
  • Solovyev AG [2]
  • Weis F [2]
  • Albiez S [1]
  • Beulen BWAMM [1]
  • Bhella D [1]
  • Bisikalo K [1]
  • Bobe D [1]
  • Braun T [1]
  • Bukharova T [1]
  • Burton-smith RN [1]
  • Butcher SJ [1]
  • Chen JZ [1]
  • Chen W [1]
  • Coureux PD [1]
  • Di Fabrizio M [1]
  • Dietrich L [1]
  • Dobias F [1]
  • Domanska A [1]
  • Dong J [1]
  • Effantin G [1]
  • Ekundayo B [1]
  • Eng ET [1]
  • Fandrich M [1]
  • Filopoulou A [1]
  • Flot D [1]
  • Giraud T [1]
  • Grininger M [1]
  • Guerrero-ferreira RC [1]
  • Henderikx RJM [1]
  • Hons M [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Kovacik L [1]
  • Kucukoglu B [1]
  • Kudryashev M [1]
  • Laanto E [1]
  • Lak B [1]
  • Lau K [1]
  • Leonard GA [1]
  • Love AJ [1]
  • Ludig D [1]
  • Mcgeachy K [1]
  • Miller J [1]
  • Momoh J [1]
  • Mueller-dieckmann C [1]
  • Murata K [1]
  • Myasnikov A [1]
  • Nazarov S [1]
  • Oksanen HM [1]
  • Oliva P [1]
  • Ophus C [1]
  • Owji AP [1]
  • Peters PJ [1]
  • Ribet SM [1]
  • Righetto R [1]
  • Rima L [1]
  • Rohou A [1]
  • Sanchez RM [1]
  • Schmidli C [1]
  • Schoehn G [1]
  • Shahzad S [1]

Author by ORCID

  • Sachse C [13]
  • Jakobi AJ [10]
  • Hagen WJ [8]
  • Bharat TA [8]
  • Fromm SA [8]
  • Leidl ML [4]
  • Mann D [4]
  • Lazic I [3]
  • Beckers M [3]
  • Clare DK [3]
  • Orlova EV [3]
  • Solovyev AG [2]
  • Stahlberg H [2]
  • Grigorieff N [2]
  • Evers WH [2]
  • Weis F [2]
  • Skurat EV [2]
  • Huber ST [2]
  • Sokolova OS [2]
  • Leonard GA [1]
  • Butcher SJ [1]
  • Mohammed I [1]
  • Varnavides G [1]
  • Filopoulou A [1]
  • Ludig D [1]
  • Miller J [1]
  • Williams PA [1]
  • Schoehn G [1]
  • Muller-caspary K [1]
  • Peters PJ [1]
  • Guerrero-ferreira RC [1]
  • Domanska A [1]
  • Stroupe ME [1]
  • Zhang Y [1]
  • Svensson O [1]
  • Effantin G [1]
  • Bobe D [1]
  • Bisikalo K [1]
  • Eng ET [1]
  • Hons M [1]
  • Lau K [1]
  • Braun T [1]
  • Kandiah E [1]
  • Kopylov M [1]
  • Chinmaya KV [1]
  • Di Fabrizio M [1]
  • Ekundayo B [1]
  • Kube M [1]
  • Mohammed I [1]
  • Radecke J [1]
  • Stahlberg H [1]
  • Ophus C [1]
  • Myasnikov A [1]
  • Oksanen HM [1]
  • Kudryashev M [1]
  • Mueller-dieckmann C [1]

Journal

  • J STRUCT BIOL [12]
  • TO BE PUBLISHED [6]
  • BIORXIV [3]
  • NAT METHODS [3]
  • ACTA CRYSTALLOGR D STRUCT BIOL [2]
  • ELIFE [2]
  • J MOL BIOL [2]
  • NAT COMMUN [2]
  • STRUCTURE [2]
  • ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
  • PNAS [1]

Software

  • SPRING [10]
  • RELION [9]
  • CRYOSPARC [5]
  • EMAN, IMAGIC, SPIDER [2]
  • CHIMERA AND COOT [1]
  • CTFFIND [1]
  • FREALIX [1]
  • IMOD [1]
  • SPIDER [1]
  • SPIDER, IMAGIC [1]
  • XPLOR [1]

Microscope

  • FEI TITAN KRIOS [19]
  • TFS KRIOS [4]
  • FEI POLARA 300 [3]
  • FEI TECNAI F30 [2]
  • JEOL 3200FSC [2]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [31]

Film or detector model

  • FEI FALCON II 4K X 4K [9]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • OTHER [4]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]
  • KODAK SO-163 FILM [2]
  • DECTRIS ELA 1K X 0.5K [1]
  • DIRECT ELECTRON APOLLO 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN K2 QUANTUM 4K X 4K [1]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [31]
  • EMPIAR [16]
  • UniProt [5]
  • PDBe-Kb [4]
  • Gene Ontology [3]
  • InterPro [3]
  • Pfam [3]