Edit your search query here and hit Return to execute it:
natural_source_ncbi_code:"5811"

Filter By

Current Database

  • EMDB [43]

Current status

  • REL [43]

Sample type

  • Complex [23]
  • Protein [23]
  • Cellular component [13]
  • Ligand [11]
  • Cell [7]
  • RNA [7]

Organism

  • Toxoplasma gondii [43]
  • Toxoplasma gondii [2]

EM Method

  • Single-particle [22]
  • Tomography [10]
  • Subtomogram averaging [9]
  • Helical reconstruction [2]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [5]
  • ≥ 3Å and < 4Å [14]
  • ≥ 6Å and < 8Å [1]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [3]
  • ≥ 30Å [7]

Model molecular weight

  • 100-250 kDa [3]
  • 500-1000 kDa [3]
  • 1-2 MDa [1]
  • 2-5 MDa [6]

Release Date

  • 2025 [9]
  • 2024 [11]
  • 2023 [13]
  • 2022 [5]
  • 2021 [3]
  • 2017 [2]

Author by name

  • Soldati-favre D [17]
  • Chang Y-W [12]
  • Chang YW [12]
  • Martinez M [12]
  • Guerin A [11]
  • Striepen B [11]
  • Boothroyd JC [7]
  • Chavin S [7]
  • Chen WD [7]
  • Chiu W [7]
  • Fu Y [7]
  • Mageswaran SK [7]
  • Segev-zarko LA [7]
  • Sibley LD [7]
  • Sun SY [7]
  • Thompson CP [7]
  • Zhang R [7]
  • Beatty WL [6]
  • Brown A [6]
  • Maco B [6]
  • Suo X [6]
  • Bonavoglia A [5]
  • Chen M [5]
  • Ludtke SJ [5]
  • Lunghi M [5]
  • Pintilie GD [5]
  • Qian P [5]
  • Schmid MF [5]
  • Vadas O [5]
  • Zeng J [5]
  • Barua S [4]
  • Boissier F [4]
  • Brusini L [4]
  • Chen Q [4]
  • Delgado-betancourt E [4]
  • Dos Santos Pacheco N [4]
  • Ferreira Silva M [4]
  • Hashem Y [4]
  • Hung YF [4]
  • Jia Y [4]
  • Kassem S [4]
  • Kloehn J [4]
  • Kursula I [4]
  • Liu X [4]
  • Lucia Del Cistia M [4]
  • Muhleip A [4]
  • Nguyen TT [4]
  • Niu Q [4]
  • Peng H [4]
  • Pires I [4]
  • Rocha REO [4]
  • Rosenthal P [4]
  • Segev-zarko L [4]
  • Sheiner L [4]
  • Shikha S [4]
  • Sun P [4]
  • Tang X [4]
  • Tell I Puig A [4]
  • Tosetti N [4]
  • Wang C [4]
  • Wang Z [4]
  • Xie F [4]
  • Ben Chaabene R [2]
  • Beraldi D [2]
  • Dahlberg PD [2]
  • David Sibley L [2]
  • De La Cruz Em [2]
  • Doggett JS [2]
  • Egan ES [2]
  • Gao N [2]
  • Gramelspacher MJ [2]
  • Guo Q [2]
  • Heaslip AT [2]
  • Hvorecny KL [2]
  • Ji Y [2]
  • Kim CY [2]
  • Kollman JM [2]
  • Lai DH [2]
  • Lentini G [2]
  • Li Z [2]
  • Liebman KM [2]
  • Lun ZR [2]
  • Ma M [2]
  • Maclean AE [2]
  • Meir A [2]
  • Nilsen A [2]
  • Ovciarikova J [2]
  • Pelt DM [2]
  • Pou S [2]
  • Riscoe MK [2]
  • Sethian JA [2]
  • Sladewski TE [2]
  • Tobiasson V [2]
  • Wang X [2]
  • Winter RW [2]
  • Xie YT [2]
  • Zheng L [2]
  • Grossmann J [1]
  • Hehl AB [1]
  • Korkhov VM [1]

Author by ORCID

  • Soldati-favre D [17]
  • Chang YW [12]
  • Guerin A [11]
  • Striepen B [11]
  • Martinez M [11]
  • Boothroyd JC [7]
  • Mageswaran SK [7]
  • Chiu W [7]
  • Segev-zarko LA [7]
  • Chavin S [7]
  • Maco B [5]
  • Sun SY [5]
  • Pintilie GD [5]
  • Ludtke SJ [5]
  • Lunghi M [5]
  • Schmid MF [5]
  • Chen M [5]
  • Vadas O [5]
  • Nguyen TT [4]
  • Sheiner L [4]
  • Delgado-betancourt E [4]
  • Muhleip A [4]
  • Sun P [4]
  • Jia Y [4]
  • Kloehn J [4]
  • Brusini L [4]
  • Shikha S [4]
  • Ferreira Silva M [4]
  • Peng H [4]
  • Tang X [4]
  • Suo X [4]
  • Dos Santos Pacheco N [4]
  • Hashem Y [4]
  • Tell I Puig A [4]
  • Wang Z [4]
  • Tobiasson V [2]
  • Meir A [2]
  • Brown A [2]
  • Kollman JM [2]
  • Riscoe MK [2]
  • Egan ES [2]
  • Ji Y [2]
  • Fu Y [2]
  • Lai DH [2]
  • Doggett JS [2]
  • Heaslip AT [2]
  • Lentini G [2]
  • Beraldi D [2]
  • Gao N [2]
  • Gramelspacher MJ [2]
  • Zhang R [2]
  • Dahlberg PD [2]
  • De La Cruz Em [2]
  • Korkhov VM [1]
  • Mukherjee B [1]
  • Hehl AB [1]
  • Ramakrishnan C [1]
  • Mehta V [1]
  • Visentin R [1]
  • Ben Chaabene R [1]

Journal

  • NAT COMMUN [22]
  • NAT STRUCT MOL BIOL [6]
  • PNAS [5]
  • TO BE PUBLISHED [5]
  • CELL RES [2]
  • PNAS NEXUS [2]
  • ACTA CRYSTALLOGR D STRUCT BIOL [1]
  • PLOS BIOL [1]
  • PROTEIN SCI [1]

Software

  • CRYOSPARC [13]
  • IMOD [9]
  • DYNAMO [6]
  • EMAN2 [4]
  • EMAN [2]
  • PHENIX [2]
  • RELION [2]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [19]
  • FEI TALOS ARCTICA [9]
  • TFS KRIOS [9]
  • FEI TECNAI SPIRIT [3]
  • FEI TITAN [1]
  • TFS GLACIOS [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [40]
  • TUNGSTEN HAIRPIN [3]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [13]
  • GATAN K3 6K X 4K [13]
  • GATAN K3 BIOQUANTUM 6K X 4K [9]
  • FEI EAGLE 2K X 2K [3]
  • GATAN K2 QUANTUM 4K X 4K [2]
  • GATAN K3 BIOCONTINUUM 6K X 4K [2]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [13]
  • PDBe-Kb [12]
  • UniProt [12]
  • AlphaFold DB [11]
  • Gene Ontology [10]
  • InterPro [9]
  • Pfam [9]
  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • CATH [1]
  • SCOP2 [1]
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EMD-72715
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Cryo-EM structure of conoid fiber from Toxoplasma gondii 24-nm repeat
Release date: Dec. 3, 2025
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 9y9z

Zeng J, Fu Y, Qian P, Sibley LD, Zhang R

To Be Published

EMD-72717
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Cryo-EM structure of intraconoidal microtubule 2 ICMT2 from Toxoplasma gondii 8-nm repeat
Release date: Dec. 3, 2025
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 9ya1

Zeng J, Fu Y, Qian P, Niu Q, Beatty WL, Brown A, Sibley LD, Zhang R

Nat Struct Mol Biol (2025) [ DOI: doi:10.1038/s41594-025-01728-w ]

EMD-72718
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Cryo-EM structure of intraconoidal microtubule 1 ICMT1 from Toxoplasma gondii 8-nm repeat
Release date: Dec. 3, 2025
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 9ya2

Zeng J, Fu Y, Qian P, Niu Q, Beatty WL, Brown A, Sibley LD, Zhang R

Nat Struct Mol Biol (2025) [ DOI: doi:10.1038/s41594-025-01728-w ]

EMD-72719
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Cryo-EM structure of the apical region of subpellicular microtubule SPMT from Toxoplasma gondii 8-nm repeat
Release date: Dec. 3, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9ya3

Zeng J, Fu Y, Qian P, Niu Q, Beatty WL, Brown A, Sibley LD, Zhang R

Nat Struct Mol Biol (2025) [ DOI: doi:10.1038/s41594-025-01728-w ]

EMD-72716
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Cryo-EM structure of pre-conoid ring 2 PCR P2 ring from Toxoplasma gondii
Release date: Nov. 19, 2025
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 9ya0

Zeng J, Fu Y, Qian P, Niu Q, Beatty WL, Brown A, Sibley LD, Zhang R

Nat Struct Mol Biol (2025) [ DOI: doi:10.1038/s41594-025-01728-w ]

EMD-52621
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Toxoplasma gondii cytochrome bc1 complex from the respiratory supercomplex III2-IV inhibited by atovaquone and ELQ-300
Release date: July 30, 2025
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 9i4x
Q-score: 0.541

MacLean AE, Shikha S, Ferreira Silva M, Gramelspacher MJ, Nilsen A, Liebman KM, Pou S, Winter RW, Meir A, Riscoe MK, Doggett JS, Sheiner L, Muhleip A

Nat Struct Mol Biol (2025) 32 pp. 1424-1433 [ Pubmed: 40389671 DOI: doi:10.1038/s41594-025-01531-7 ]

EMD-51157
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Cryo-EM structure of the Toxoplasma gondii respiratory chain complex III inhibited by ELQ-300
Release date: June 18, 2025
Resolution: 1.8 Å
EM Method: Single-particle
Fitted PDBs: 9g9t
Q-score: -0.015

MacLean AE, Shikha S, Ferreira Silva M, Gramelspacher MJ, Nilsen A, Liebman KM, Pou S, Winter RW, Meir A, Riscoe MK, Doggett JS, Sheiner L, Muhleip A

Nat Struct Mol Biol (2025) [ Pubmed: 40389671 DOI: doi:10.1038/s41594-025-01531-7 ]

EMD-52348
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Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
Release date: June 11, 2025
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 9hqv
Q-score: 0.431

Shikha S, Tobiasson V, Ferreira Silva M, Ovciarikova J, Beraldi D, Muhleip A, Sheiner L

Nat Commun (2025) 16 pp. 817-817 [ DOI: doi:10.1038/s41467-025-56057-9 Pubmed: 39827269 ]

EMD-52551
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Cryo-EM structure of the large subunit of the mitochondrial ribosome from Toxoplasma gondii
Release date: June 11, 2025
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 9i05
Q-score: 0.611

Shikha S, Tobiasson V, Ferreira Silva M, Ovciarikova J, Beraldi D, Muhleip A, Sheiner L

Nat Commun (2025) 16 pp. 817-817 [ DOI: doi:10.1038/s41467-025-56057-9 Pubmed: 39827269 ]

EMD-50448
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SSU head structure derived from the SSU sample of the mitoribosome from T. gondii.
Release date: Dec. 11, 2024
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9fi8
Q-score: 0.269

Wang C, Kassem S, Rocha REO, Sun P, Nguyen TT, Kloehn J, Liu X, Brusini L, Bonavoglia A, Barua S, Boissier F, Lucia Del Cistia M, Peng H, Tang X, Xie F, Wang Z, Vadas O, Suo X, Hashem Y, Soldati-Favre D, Jia Y

Nat Commun (2024) 15 pp. 10689-10689 [ DOI: doi:10.1038/s41467-024-55033-z Pubmed: 39690155 ]

Sort by: Download
Showing 1 - 10 of 43. Page 1 of 5
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [43]

Current status

  • REL [43]

Sample type

  • Complex [23]
  • Protein [23]
  • Cellular component [13]
  • Ligand [11]
  • Cell [7]
  • RNA [7]

Organism

  • Toxoplasma gondii [43]
  • Toxoplasma gondii [2]

EM Method

  • Single-particle [22]
  • Tomography [10]
  • Subtomogram averaging [9]
  • Helical reconstruction [2]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [5]
  • ≥ 3Å and < 4Å [14]
  • ≥ 6Å and < 8Å [1]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [3]
  • ≥ 30Å [7]

Model molecular weight

  • 100-250 kDa [3]
  • 500-1000 kDa [3]
  • 1-2 MDa [1]
  • 2-5 MDa [6]

Release Date

  • 2025 [9]
  • 2024 [11]
  • 2023 [13]
  • 2022 [5]
  • 2021 [3]
  • 2017 [2]

Author by name

  • Soldati-favre D [17]
  • Chang Y-W [12]
  • Chang YW [12]
  • Martinez M [12]
  • Guerin A [11]
  • Striepen B [11]
  • Boothroyd JC [7]
  • Chavin S [7]
  • Chen WD [7]
  • Chiu W [7]
  • Fu Y [7]
  • Mageswaran SK [7]
  • Segev-zarko LA [7]
  • Sibley LD [7]
  • Sun SY [7]
  • Thompson CP [7]
  • Zhang R [7]
  • Beatty WL [6]
  • Brown A [6]
  • Maco B [6]
  • Suo X [6]
  • Bonavoglia A [5]
  • Chen M [5]
  • Ludtke SJ [5]
  • Lunghi M [5]
  • Pintilie GD [5]
  • Qian P [5]
  • Schmid MF [5]
  • Vadas O [5]
  • Zeng J [5]
  • Barua S [4]
  • Boissier F [4]
  • Brusini L [4]
  • Chen Q [4]
  • Delgado-betancourt E [4]
  • Dos Santos Pacheco N [4]
  • Ferreira Silva M [4]
  • Hashem Y [4]
  • Hung YF [4]
  • Jia Y [4]
  • Kassem S [4]
  • Kloehn J [4]
  • Kursula I [4]
  • Liu X [4]
  • Lucia Del Cistia M [4]
  • Muhleip A [4]
  • Nguyen TT [4]
  • Niu Q [4]
  • Peng H [4]
  • Pires I [4]
  • Rocha REO [4]
  • Rosenthal P [4]
  • Segev-zarko L [4]
  • Sheiner L [4]
  • Shikha S [4]
  • Sun P [4]
  • Tang X [4]
  • Tell I Puig A [4]
  • Tosetti N [4]
  • Wang C [4]
  • Wang Z [4]
  • Xie F [4]
  • Ben Chaabene R [2]
  • Beraldi D [2]
  • Dahlberg PD [2]
  • David Sibley L [2]
  • De La Cruz Em [2]
  • Doggett JS [2]
  • Egan ES [2]
  • Gao N [2]
  • Gramelspacher MJ [2]
  • Guo Q [2]
  • Heaslip AT [2]
  • Hvorecny KL [2]
  • Ji Y [2]
  • Kim CY [2]
  • Kollman JM [2]
  • Lai DH [2]
  • Lentini G [2]
  • Li Z [2]
  • Liebman KM [2]
  • Lun ZR [2]
  • Ma M [2]
  • Maclean AE [2]
  • Meir A [2]
  • Nilsen A [2]
  • Ovciarikova J [2]
  • Pelt DM [2]
  • Pou S [2]
  • Riscoe MK [2]
  • Sethian JA [2]
  • Sladewski TE [2]
  • Tobiasson V [2]
  • Wang X [2]
  • Winter RW [2]
  • Xie YT [2]
  • Zheng L [2]
  • Grossmann J [1]
  • Hehl AB [1]
  • Korkhov VM [1]

Author by ORCID

  • Soldati-favre D [17]
  • Chang YW [12]
  • Guerin A [11]
  • Striepen B [11]
  • Martinez M [11]
  • Boothroyd JC [7]
  • Mageswaran SK [7]
  • Chiu W [7]
  • Segev-zarko LA [7]
  • Chavin S [7]
  • Maco B [5]
  • Sun SY [5]
  • Pintilie GD [5]
  • Ludtke SJ [5]
  • Lunghi M [5]
  • Schmid MF [5]
  • Chen M [5]
  • Vadas O [5]
  • Nguyen TT [4]
  • Sheiner L [4]
  • Delgado-betancourt E [4]
  • Muhleip A [4]
  • Sun P [4]
  • Jia Y [4]
  • Kloehn J [4]
  • Brusini L [4]
  • Shikha S [4]
  • Ferreira Silva M [4]
  • Peng H [4]
  • Tang X [4]
  • Suo X [4]
  • Dos Santos Pacheco N [4]
  • Hashem Y [4]
  • Tell I Puig A [4]
  • Wang Z [4]
  • Tobiasson V [2]
  • Meir A [2]
  • Brown A [2]
  • Kollman JM [2]
  • Riscoe MK [2]
  • Egan ES [2]
  • Ji Y [2]
  • Fu Y [2]
  • Lai DH [2]
  • Doggett JS [2]
  • Heaslip AT [2]
  • Lentini G [2]
  • Beraldi D [2]
  • Gao N [2]
  • Gramelspacher MJ [2]
  • Zhang R [2]
  • Dahlberg PD [2]
  • De La Cruz Em [2]
  • Korkhov VM [1]
  • Mukherjee B [1]
  • Hehl AB [1]
  • Ramakrishnan C [1]
  • Mehta V [1]
  • Visentin R [1]
  • Ben Chaabene R [1]

Journal

  • NAT COMMUN [22]
  • NAT STRUCT MOL BIOL [6]
  • PNAS [5]
  • TO BE PUBLISHED [5]
  • CELL RES [2]
  • PNAS NEXUS [2]
  • ACTA CRYSTALLOGR D STRUCT BIOL [1]
  • PLOS BIOL [1]
  • PROTEIN SCI [1]

Software

  • CRYOSPARC [13]
  • IMOD [9]
  • DYNAMO [6]
  • EMAN2 [4]
  • EMAN [2]
  • PHENIX [2]
  • RELION [2]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [19]
  • FEI TALOS ARCTICA [9]
  • TFS KRIOS [9]
  • FEI TECNAI SPIRIT [3]
  • FEI TITAN [1]
  • TFS GLACIOS [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [40]
  • TUNGSTEN HAIRPIN [3]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [13]
  • GATAN K3 6K X 4K [13]
  • GATAN K3 BIOQUANTUM 6K X 4K [9]
  • FEI EAGLE 2K X 2K [3]
  • GATAN K2 QUANTUM 4K X 4K [2]
  • GATAN K3 BIOCONTINUUM 6K X 4K [2]
  • FEI FALCON III 4K X 4K [1]

External links

  • PDB [13]
  • PDBe-Kb [12]
  • UniProt [12]
  • AlphaFold DB [11]
  • Gene Ontology [10]
  • InterPro [9]
  • Pfam [9]
  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • CATH [1]
  • SCOP2 [1]