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natural_source_ncbi_code:"37502"

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Current Database

  • EMDB [59]

Current status

  • REL [59]

Sample type

  • Protein [58]
  • Complex [57]
  • Ligand [56]
  • Cell [2]

Organism

  • Polytomella sp. pringsheim 198.80 [59]
  • (no species) [1]

EM Method

  • Single-particle [57]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [12]
  • ≥ 3Å and < 4Å [40]
  • ≥ 4Å and < 5Å [5]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [8]
  • 500-1000 kDa [46]
  • 1-2 MDa [2]

Release Date

  • 2024 [2]
  • 2021 [3]
  • 2019 [53]
  • 2017 [1]

Author by name

  • Kuhlbrandt W [59]
  • Klusch N [57]
  • Yildiz O [57]
  • Mills DJ [54]
  • Murphy BJ [54]
  • Langer J [53]
  • Kuehlbrandt W [6]
  • Braun HP [3]
  • Senkler J [3]
  • Agip AA [2]
  • Agip ANA [2]
  • Dietrich L [2]
  • Kunz C [2]
  • Schwarz A [2]

Author by ORCID

  • Kuhlbrandt W [59]
  • Klusch N [57]
  • Murphy BJ [54]
  • Mills DJ [54]
  • Langer J [53]
  • Yildiz O [4]
  • Senkler J [3]
  • Braun HP [3]
  • Agip AA [2]
  • Dietrich L [2]
  • Schwarz A [2]

Journal

  • SCIENCE [55]
  • PLANT CELL [3]
  • ACTA CRYSTALLOGR D STRUCT BIOL [1]
  • ELIFE [1]
  • PROTEIN SCI [1]

Software

  • RELION [55]
  • CTFFIND [2]
  • STOPGAP [2]
  • COOT [1]
  • WARP [1]

Microscope

  • FEI TITAN KRIOS [58]
  • JEOL 3200FSC [1]

Electron Source

  • FIELD EMISSION GUN [59]

Film or detector model

  • FEI FALCON III 4K X 4K [53]
  • GATAN K3 6K X 4K [5]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [58]
  • AlphaFold DB [57]
  • Gene Ontology [57]
  • InterPro [57]
  • PDBe-Kb [57]
  • Pfam [57]
  • UniProt [57]
  • ChEBI [56]
  • ChEMBL [56]
  • DrugBank [56]
  • EMPIAR [53]
  • CATH [1]
  • SCOP2 [1]
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Showing 1 - 10 of 59. Page 1 of 6
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EMD-50001
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3D View
Structure of the peripheral stalk of the Polytomella ATPsynthase dimer in whole cells
Release date: Oct. 9, 2024
Resolution: 6.9 Å
EM Method: Subtomogram averaging

Dietrich L, Agip AA, Kunz C, Schwarz A, Kuhlbrandt W

Science (2024) 385 pp. 1086-1090 [ DOI: doi:10.1126/science.adp4640 Pubmed: 39236170 ]

EMD-19999
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3D View
In situ structure of the peripheral stalk of the mitochondrial ATPsynthase in whole Polytomella cells
Release date: Sept. 18, 2024
Resolution: 5.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9evd
Q-score: 0.192

Dietrich L, Agip AA, Kunz C, Schwarz A, Kuhlbrandt W

Science (2024) 385 pp. 1086-1090 [ DOI: doi:10.1126/science.adp4640 Pubmed: 39236170 ]

EMD-11877
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3D View
Cryo-EM structure of Polytomella Complex-I membrane arm
Release date: Dec. 8, 2021
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7ar9
Q-score: 0.565

Klusch N, Senkler J, Yildiz O, Kuhlbrandt W, Braun HP

Plant Cell (2021) 33 pp. 2072-2091 [ DOI: doi:10.1093/plcell/koab092 Pubmed: 33768254 ]

EMD-11879
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3D View
Cryo-EM structure of Polytomella Complex-I peripheral arm
Release date: Dec. 8, 2021
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 7arc
Q-score: 0.563

Klusch N, Senkler J, Yildiz O, Kuhlbrandt W, Braun HP

Plant Cell (2021) 33 pp. 2072-2091 [ DOI: doi:10.1093/plcell/koab092 Pubmed: 33768254 ]

EMD-11880
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3D View
Cryo-EM structure of Polytomella Complex-I complete composition
Release date: Dec. 8, 2021
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 7ard
Q-score: 0.557

Klusch N, Senkler J, Yildiz O, Kuhlbrandt W, Braun HP

Plant Cell (2021) 33 pp. 2072-2091 [ DOI: doi:10.1093/plcell/koab092 Pubmed: 33768254 ]

EMD-4805
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3D View
Raw data
EMPIAR-10375
CryoEM structure of Polytomella F-ATP synthase, Full dimer, composite map
Release date: July 3, 2019
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6rd4
Q-score: 0.557

Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W

Science (2019) 364 [ Pubmed: 31221832 DOI: doi:10.1126/science.aaw9128 ]

EMD-4806
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3D View
Raw data
EMPIAR-10375
CryoEM structure of Polytomella F-ATP synthase, focussed refinement of Fo and peripheral stalk, C2 symmetry
Release date: July 3, 2019
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 6rd5
Q-score: 0.601

Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W

Science (2019) 364 [ Pubmed: 31221832 DOI: doi:10.1126/science.aaw9128 ]

EMD-4807
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3D View
Raw data
EMPIAR-10375
CryoEM structure of Polytomella F-ATP synthase, focussed refinement of upper peripheral stalk
Release date: July 3, 2019
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 6rd6
Q-score: 0.587

Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W

Science (2019) 364 [ Pubmed: 31221832 DOI: doi:10.1126/science.aaw9128 ]

EMD-4808
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3D View
Raw data
EMPIAR-10375
CryoEM structure of Polytomella F-ATP synthase, c-ring position 1, focussed refinement of Fo and peripheral stalk
Release date: July 3, 2019
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 6rd7
Q-score: 0.571

Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W

Science (2019) 364 [ Pubmed: 31221832 DOI: doi:10.1126/science.aaw9128 ]

EMD-4809
Download Map
3D View
Raw data
EMPIAR-10375
CryoEM structure of Polytomella F-ATP synthase, c-ring position 2, focussed refinement of Fo and peripheral stalk
Release date: July 3, 2019
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 6rd8
Q-score: 0.548

Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W

Science (2019) 364 [ Pubmed: 31221832 DOI: doi:10.1126/science.aaw9128 ]

Sort by: Download
Showing 1 - 10 of 59. Page 1 of 6
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [59]

Current status

  • REL [59]

Sample type

  • Protein [58]
  • Complex [57]
  • Ligand [56]
  • Cell [2]

Organism

  • Polytomella sp. pringsheim 198.80 [59]
  • (no species) [1]

EM Method

  • Single-particle [57]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [12]
  • ≥ 3Å and < 4Å [40]
  • ≥ 4Å and < 5Å [5]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [8]
  • 500-1000 kDa [46]
  • 1-2 MDa [2]

Release Date

  • 2024 [2]
  • 2021 [3]
  • 2019 [53]
  • 2017 [1]

Author by name

  • Kuhlbrandt W [59]
  • Klusch N [57]
  • Yildiz O [57]
  • Mills DJ [54]
  • Murphy BJ [54]
  • Langer J [53]
  • Kuehlbrandt W [6]
  • Braun HP [3]
  • Senkler J [3]
  • Agip AA [2]
  • Agip ANA [2]
  • Dietrich L [2]
  • Kunz C [2]
  • Schwarz A [2]

Author by ORCID

  • Kuhlbrandt W [59]
  • Klusch N [57]
  • Murphy BJ [54]
  • Mills DJ [54]
  • Langer J [53]
  • Yildiz O [4]
  • Senkler J [3]
  • Braun HP [3]
  • Agip AA [2]
  • Dietrich L [2]
  • Schwarz A [2]

Journal

  • SCIENCE [55]
  • PLANT CELL [3]
  • ACTA CRYSTALLOGR D STRUCT BIOL [1]
  • ELIFE [1]
  • PROTEIN SCI [1]

Software

  • RELION [55]
  • CTFFIND [2]
  • STOPGAP [2]
  • COOT [1]
  • WARP [1]

Microscope

  • FEI TITAN KRIOS [58]
  • JEOL 3200FSC [1]

Electron Source

  • FIELD EMISSION GUN [59]

Film or detector model

  • FEI FALCON III 4K X 4K [53]
  • GATAN K3 6K X 4K [5]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [58]
  • AlphaFold DB [57]
  • Gene Ontology [57]
  • InterPro [57]
  • PDBe-Kb [57]
  • Pfam [57]
  • UniProt [57]
  • ChEBI [56]
  • ChEMBL [56]
  • DrugBank [56]
  • EMPIAR [53]
  • CATH [1]
  • SCOP2 [1]