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natural_source_ncbi_code:"37124"

Filter By

Current Database

  • EMDB [72]

Current status

  • REL [72]

Sample type

  • Virus [39]
  • Protein [31]
  • Complex [29]
  • Sample [13]
  • Ligand [7]
  • Cellular component [6]
  • Cell [3]

Organism

  • Chikungunya virus [72]
  • Mus musculus [14]
  • Homo sapiens [12]
  • Chikungunya virus [1]
  • Anas platyrhynchos [1]

EM Method

  • Single-particle [44]
  • Subtomogram averaging [26]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [14]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [4]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [9]
  • ≥ 20Å and < 30Å [5]
  • ≥ 30Å [15]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [6]
  • 500-1000 kDa [4]
  • 1-2 MDa [2]
  • > 10 MDa [12]

Release Date

  • 2025 [17]
  • 2024 [3]
  • 2023 [4]
  • 2022 [22]
  • 2020 [6]
  • 2019 [7]
  • 2016 [3]
  • 2015 [5]
  • 2013 [5]

Author by name

  • Jin J [28]
  • Chiu W [22]
  • Diamond MS [22]
  • Simmons G [20]
  • Chmielewski D [18]
  • Schmid MF [14]
  • Carlson LA [11]
  • Gao FG [11]
  • Rossmann MG [11]
  • Yan J [11]
  • Fox JM [10]
  • Han X [10]
  • Ji C [10]
  • Tian S [10]
  • Wang F [10]
  • Akahata W [9]
  • Kim AS [9]
  • Laurent T [9]
  • Schmid M [7]
  • Doranz BJ [6]
  • Earnest JT [6]
  • Fong RH [6]
  • Galaz-montoya JG [6]
  • Pintilie G [6]
  • Su GC [6]
  • Fibriansah G [5]
  • Gao GF [5]
  • Holdaway H [5]
  • Kostyuchenko VA [5]
  • Liu Y [5]
  • Lok SM [5]
  • Nabel GJ [5]
  • Ng TS [5]
  • Pal P [5]
  • Qi J [5]
  • Sherman MB [5]
  • Shi J [5]
  • Shu B [5]
  • Sun S [5]
  • Xiang Y [5]
  • Zhang X [5]
  • Zhou QF [5]
  • Cao GP [4]
  • Carlson A [4]
  • Chen M [4]
  • Duan X [4]
  • Fremont DH [4]
  • Huang Q [4]
  • Jonasson M [4]
  • Kumar P [4]
  • Li D [4]
  • Liese S [4]
  • Porta J [4]
  • Tong Z [4]
  • Wang Q [4]
  • Zare F [4]
  • Zhan BD [4]
  • Auguste A [3]
  • Bakkour S [3]
  • Basore K [3]
  • Chafets D [3]
  • Chen D-H [3]
  • Chen DH [3]
  • Crowe JE [3]
  • Fan X [3]
  • Fomin ME [3]
  • Han Y [3]
  • Keating S [3]
  • Klose T [3]
  • Lei J [3]
  • Liao M [3]
  • Liss N [3]
  • Liss NM [3]
  • Liu YZ [3]
  • Long F [3]
  • Muench MO [3]
  • Nelson CA [3]
  • Shimak RM [3]
  • Sun SY [3]
  • Wang J [3]
  • Wang K [3]
  • Wang KT [3]
  • Xia X [3]
  • Zeng R [3]
  • Zhang B [3]
  • Ackerman L [2]
  • Aman MJ [2]
  • Auguste AJ [2]
  • Austin SK [2]
  • Brown RS [2]
  • Chandran K [2]
  • Chen Z [2]
  • Cheng M [2]
  • Chmielewsk D [2]
  • Cohen CA [2]
  • Daily JP [2]
  • Durnell LA [2]
  • Dye JM [2]
  • Fokine A [2]
  • Goldsmith CS [2]

Author by ORCID

  • Jin J [23]
  • Chiu W [22]
  • Simmons G [20]
  • Chmielewski D [17]
  • Carlson LA [11]
  • Akahata W [9]
  • Laurent T [9]
  • Fox JM [9]
  • Kim AS [9]
  • Diamond MS [7]
  • Schmid M [7]
  • Schmid MF [7]
  • Su GC [6]
  • Kostyuchenko VA [5]
  • Ng TS [5]
  • Shu B [5]
  • Zhou QF [5]
  • Fibriansah G [5]
  • Xiang Y [5]
  • Lok SM [5]
  • Jonasson M [4]
  • Zare F [4]
  • Liese S [4]
  • Galaz-montoya JG [4]
  • Pintilie G [4]
  • Carlson A [4]
  • Chen M [4]
  • Muench MO [3]
  • Lei J [3]
  • Crowe JE [3]
  • Gao GF [3]
  • Keating S [3]
  • Wang F [3]
  • Fremont DH [3]
  • Zhang B [3]
  • Qi J [3]
  • Tong Z [3]
  • Wang Q [3]
  • Zhan BD [3]
  • Yan J [3]
  • Huang Q [3]
  • Holtsberg FW [2]
  • Basore K [2]
  • Aman MJ [2]
  • Luo D [2]
  • Auguste AJ [2]
  • Kaelber JT [2]
  • Sapparapu G [2]
  • Pintilie GD [2]
  • Dye JM [2]
  • Tan YB [2]
  • Cheng M [2]
  • Jangra RK [2]
  • Prasad VM [2]
  • Lai JR [2]
  • Malonis RJ [2]
  • Law MCY [2]
  • Kielian M [2]
  • Chandran K [2]
  • Porta J [2]
  • Uranga C [2]
  • Zhang K [2]
  • Zhang R [2]
  • Brown RS [2]
  • He Y [2]
  • Ng LF [2]
  • Lin H [1]
  • Basore K [1]
  • Adams LJ [1]
  • Briant L [1]
  • Bron P [1]
  • Edeling MA [1]
  • Raju S [1]
  • Chee M [1]
  • Girard J [1]

Journal

  • TO BE PUBLISHED [23]
  • ELIFE [9]
  • PNAS [7]
  • CELL [5]
  • PLOS NEGL TROP DIS [5]
  • NAT COMMUN [4]
  • CELL HOST MICROBE [3]
  • CELL REP [3]
  • J VIROL [3]
  • MBIO [3]
  • PLOS PATHOG [2]
  • PNAS NEXUS [2]
  • SCI ADV [2]
  • NAT MICROBIOL [1]

Software

  • EMAN2 [14]
  • CTFFIND [8]
  • RELION [8]
  • DYNAMO [7]
  • EMFIT [7]
  • CRYOSPARC [5]
  • CTFPHASEFLIP [4]
  • JSPR [4]
  • CHIMERA [3]
  • CISTEM [2]
  • EMAN [2]
  • FREALIGN [2]
  • GCTF [2]
  • IMOD [2]
  • RELION_1.3 [2]
  • EMAN, FREALIGN [1]
  • RELION-1.3 [1]

Microscope

  • FEI TITAN KRIOS [40]
  • FEI TALOS ARCTICA [9]
  • TFS KRIOS [6]
  • TFS TALOS [6]
  • FEI TECNAI F20 [4]
  • FEI/PHILIPS CM200FEG [2]
  • FEI/PHILIPS CM300FEG/HE [2]
  • JEOL 2200FS [2]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [71]
  • OTHER [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [32]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • FEI FALCON II 4K X 4K [5]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [4]
  • FEI CETA 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]
  • DIRECT ELECTRON DE-20 5K X 3K [2]
  • TVIPS TEMCAM-F816 8K X 8K [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN K2 BASE 4K X 4K [1]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • GENERIC FILM [1]

External links

  • PDB [25]
  • Pfam [19]
  • UniProt [19]
  • PDBe-Kb [18]
  • AlphaFold DB [13]
  • InterPro [13]
  • Gene Ontology [10]
  • ChEBI [7]
  • ChEMBL [6]
  • DrugBank [3]
  • Complex Portal [1]
Sort by: Download
Showing 1 - 10 of 72. Page 1 of 8
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EMD-61168
Download Map
3D View
Structure of Chikungunya virus infectious particles, 2f block.
Release date: Dec. 3, 2025
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 9j6d
Q-score: 0.483

Han X, Ji C, Tian S, Wang F, Cao GP, Li D, Duan X, Tong Z, Qi J, Wang Q, Huang Q, Zhan BD, Gao GF, Yan J

Nat Commun (2025) 16 pp. 9682-9682 [ Pubmed: 41184282 DOI: doi:10.1038/s41467-025-64687-2 ]

EMD-60966
Download Map
3D View
Cryo-EM structure of chikungunya virus glycoprotein E1-E2 with C34 Fab.
Release date: Nov. 19, 2025
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 9ixa
Q-score: 0.432

Han X, Ji C, Tian S, Wang F, Cao GP, Li D, Duan X, Tong Z, Qi J, Wang Q, Huang Q, Zhan BD, Gao GF, Yan J

Nat Commun (2025) 16 pp. 9682-9682 [ Pubmed: 41184282 DOI: doi:10.1038/s41467-025-64687-2 ]

EMD-60970
Download Map
3D View
VLP structure of Chikungunya virus, 2f block.
Release date: Nov. 19, 2025
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 9ixi
Q-score: 0.479

Han X, Ji C, Tian S, Wang F, Cao GP, Li D, Duan X, Tong Z, Qi J, Wang Q, Huang Q, Zhan BD, Gao GF, Yan J

Nat Commun (2025) 16 pp. 9682-9682 [ Pubmed: 41184282 DOI: doi:10.1038/s41467-025-64687-2 ]

EMD-60997
Download Map
3D View
VLP structure of Chikungunya virus complexed with C34 Fab, 2f block.
Release date: Nov. 12, 2025
Resolution: 3.73 Å
EM Method: Single-particle
Fitted PDBs: 9iyi
Q-score: 0.388

Han X, Ji C, Tian S, Wang F, Cao GP, Li D, Duan X, Tong Z, Qi J, Wang Q, Huang Q, Zhan BD, Gao GF, Yan J

Nat Commun (2025) 16 pp. 9682-9682 [ Pubmed: 41184282 DOI: doi:10.1038/s41467-025-64687-2 ]

EMD-44547
Download Map
3D View
Cryo-EM structure of Chikungunya virus asymmetric unit with Fab IM-CKV063
Release date: Oct. 22, 2025
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9bhh
Q-score: 0.39

Su GC, Galaz-Montoya JG, Pintilie G, Jin J, Chiu W

To Be Published

EMD-44423
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3D View
Cryo-EM structure of Chikungunya virus asymmetric unit with Fab C9
Release date: Oct. 8, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9bbn
Q-score: 0.378

Su GC, Galaz-Montoya JG, Pintilie G, Jin J, Chiu W

To Be Published

EMD-44337
Download Map
3D View
Cryo-EM structure of Chikungunya virus in complex with Fab fragment of neutralizing antibody C9
Release date: Oct. 1, 2025
Resolution: 4.6 Å
EM Method: Single-particle

Su GC, Pintilie G, Galaz-Montoya JG, Jin J, Chiu W

To Be Published

EMD-44340
Download Map
3D View
Cryo-EM structure of Chikungunya virus in complex with Fab fragment of neutralizing antibody IM-CKV063
Release date: Oct. 1, 2025
Resolution: 4.8 Å
EM Method: Single-particle

Su GC, Galaz-Montoya JG, Pintilie G, Jin J, Chiu W

To Be Published

EMD-61169
Download Map
3D View
Structure of Chikungunya virus infectious particles, 5f block.
Release date: Aug. 20, 2025
Resolution: 3.01 Å
EM Method: Single-particle

Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

To Be Published

EMD-60999
Download Map
3D View
VLP structure of Chikungunya virus complexed with C34 Fab, 5f block.
Release date: Aug. 6, 2025
Resolution: 3.71 Å
EM Method: Single-particle

Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

To Be Published

Sort by: Download
Showing 1 - 10 of 72. Page 1 of 8
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [72]

Current status

  • REL [72]

Sample type

  • Virus [39]
  • Protein [31]
  • Complex [29]
  • Sample [13]
  • Ligand [7]
  • Cellular component [6]
  • Cell [3]

Organism

  • Chikungunya virus [72]
  • Mus musculus [14]
  • Homo sapiens [12]
  • Chikungunya virus [1]
  • Anas platyrhynchos [1]

EM Method

  • Single-particle [44]
  • Subtomogram averaging [26]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [14]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [4]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [9]
  • ≥ 20Å and < 30Å [5]
  • ≥ 30Å [15]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [6]
  • 500-1000 kDa [4]
  • 1-2 MDa [2]
  • > 10 MDa [12]

Release Date

  • 2025 [17]
  • 2024 [3]
  • 2023 [4]
  • 2022 [22]
  • 2020 [6]
  • 2019 [7]
  • 2016 [3]
  • 2015 [5]
  • 2013 [5]

Author by name

  • Jin J [28]
  • Chiu W [22]
  • Diamond MS [22]
  • Simmons G [20]
  • Chmielewski D [18]
  • Schmid MF [14]
  • Carlson LA [11]
  • Gao FG [11]
  • Rossmann MG [11]
  • Yan J [11]
  • Fox JM [10]
  • Han X [10]
  • Ji C [10]
  • Tian S [10]
  • Wang F [10]
  • Akahata W [9]
  • Kim AS [9]
  • Laurent T [9]
  • Schmid M [7]
  • Doranz BJ [6]
  • Earnest JT [6]
  • Fong RH [6]
  • Galaz-montoya JG [6]
  • Pintilie G [6]
  • Su GC [6]
  • Fibriansah G [5]
  • Gao GF [5]
  • Holdaway H [5]
  • Kostyuchenko VA [5]
  • Liu Y [5]
  • Lok SM [5]
  • Nabel GJ [5]
  • Ng TS [5]
  • Pal P [5]
  • Qi J [5]
  • Sherman MB [5]
  • Shi J [5]
  • Shu B [5]
  • Sun S [5]
  • Xiang Y [5]
  • Zhang X [5]
  • Zhou QF [5]
  • Cao GP [4]
  • Carlson A [4]
  • Chen M [4]
  • Duan X [4]
  • Fremont DH [4]
  • Huang Q [4]
  • Jonasson M [4]
  • Kumar P [4]
  • Li D [4]
  • Liese S [4]
  • Porta J [4]
  • Tong Z [4]
  • Wang Q [4]
  • Zare F [4]
  • Zhan BD [4]
  • Auguste A [3]
  • Bakkour S [3]
  • Basore K [3]
  • Chafets D [3]
  • Chen D-H [3]
  • Chen DH [3]
  • Crowe JE [3]
  • Fan X [3]
  • Fomin ME [3]
  • Han Y [3]
  • Keating S [3]
  • Klose T [3]
  • Lei J [3]
  • Liao M [3]
  • Liss N [3]
  • Liss NM [3]
  • Liu YZ [3]
  • Long F [3]
  • Muench MO [3]
  • Nelson CA [3]
  • Shimak RM [3]
  • Sun SY [3]
  • Wang J [3]
  • Wang K [3]
  • Wang KT [3]
  • Xia X [3]
  • Zeng R [3]
  • Zhang B [3]
  • Ackerman L [2]
  • Aman MJ [2]
  • Auguste AJ [2]
  • Austin SK [2]
  • Brown RS [2]
  • Chandran K [2]
  • Chen Z [2]
  • Cheng M [2]
  • Chmielewsk D [2]
  • Cohen CA [2]
  • Daily JP [2]
  • Durnell LA [2]
  • Dye JM [2]
  • Fokine A [2]
  • Goldsmith CS [2]

Author by ORCID

  • Jin J [23]
  • Chiu W [22]
  • Simmons G [20]
  • Chmielewski D [17]
  • Carlson LA [11]
  • Akahata W [9]
  • Laurent T [9]
  • Fox JM [9]
  • Kim AS [9]
  • Diamond MS [7]
  • Schmid M [7]
  • Schmid MF [7]
  • Su GC [6]
  • Kostyuchenko VA [5]
  • Ng TS [5]
  • Shu B [5]
  • Zhou QF [5]
  • Fibriansah G [5]
  • Xiang Y [5]
  • Lok SM [5]
  • Jonasson M [4]
  • Zare F [4]
  • Liese S [4]
  • Galaz-montoya JG [4]
  • Pintilie G [4]
  • Carlson A [4]
  • Chen M [4]
  • Muench MO [3]
  • Lei J [3]
  • Crowe JE [3]
  • Gao GF [3]
  • Keating S [3]
  • Wang F [3]
  • Fremont DH [3]
  • Zhang B [3]
  • Qi J [3]
  • Tong Z [3]
  • Wang Q [3]
  • Zhan BD [3]
  • Yan J [3]
  • Huang Q [3]
  • Holtsberg FW [2]
  • Basore K [2]
  • Aman MJ [2]
  • Luo D [2]
  • Auguste AJ [2]
  • Kaelber JT [2]
  • Sapparapu G [2]
  • Pintilie GD [2]
  • Dye JM [2]
  • Tan YB [2]
  • Cheng M [2]
  • Jangra RK [2]
  • Prasad VM [2]
  • Lai JR [2]
  • Malonis RJ [2]
  • Law MCY [2]
  • Kielian M [2]
  • Chandran K [2]
  • Porta J [2]
  • Uranga C [2]
  • Zhang K [2]
  • Zhang R [2]
  • Brown RS [2]
  • He Y [2]
  • Ng LF [2]
  • Lin H [1]
  • Basore K [1]
  • Adams LJ [1]
  • Briant L [1]
  • Bron P [1]
  • Edeling MA [1]
  • Raju S [1]
  • Chee M [1]
  • Girard J [1]

Journal

  • TO BE PUBLISHED [23]
  • ELIFE [9]
  • PNAS [7]
  • CELL [5]
  • PLOS NEGL TROP DIS [5]
  • NAT COMMUN [4]
  • CELL HOST MICROBE [3]
  • CELL REP [3]
  • J VIROL [3]
  • MBIO [3]
  • PLOS PATHOG [2]
  • PNAS NEXUS [2]
  • SCI ADV [2]
  • NAT MICROBIOL [1]

Software

  • EMAN2 [14]
  • CTFFIND [8]
  • RELION [8]
  • DYNAMO [7]
  • EMFIT [7]
  • CRYOSPARC [5]
  • CTFPHASEFLIP [4]
  • JSPR [4]
  • CHIMERA [3]
  • CISTEM [2]
  • EMAN [2]
  • FREALIGN [2]
  • GCTF [2]
  • IMOD [2]
  • RELION_1.3 [2]
  • EMAN, FREALIGN [1]
  • RELION-1.3 [1]

Microscope

  • FEI TITAN KRIOS [40]
  • FEI TALOS ARCTICA [9]
  • TFS KRIOS [6]
  • TFS TALOS [6]
  • FEI TECNAI F20 [4]
  • FEI/PHILIPS CM200FEG [2]
  • FEI/PHILIPS CM300FEG/HE [2]
  • JEOL 2200FS [2]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [71]
  • OTHER [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [32]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • FEI FALCON II 4K X 4K [5]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [4]
  • FEI CETA 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [3]
  • DIRECT ELECTRON DE-20 5K X 3K [2]
  • TVIPS TEMCAM-F816 8K X 8K [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 4K X 4K [1]
  • GATAN K2 BASE 4K X 4K [1]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • GENERIC FILM [1]

External links

  • PDB [25]
  • Pfam [19]
  • UniProt [19]
  • PDBe-Kb [18]
  • AlphaFold DB [13]
  • InterPro [13]
  • Gene Ontology [10]
  • ChEBI [7]
  • ChEMBL [6]
  • DrugBank [3]
  • Complex Portal [1]