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natural_source_ncbi_code:"12541"

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Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Virus [23]
  • Sample [14]
  • Protein [9]

Organism

  • Nudaurelia capensis omega virus [23]

EM Method

  • Single-particle [23]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [2]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [5]
  • ≥ 20Å and < 30Å [4]

Model molecular weight

  • > 10 MDa [8]

Release Date

  • 2022 [7]
  • 2021 [2]
  • 2014 [1]
  • 2013 [8]
  • 2012 [4]
  • 2010 [1]

Author by name

  • Johnson JE [23]
  • Matsui T [12]
  • Domitrovic T [10]
  • Castells-graells R [9]
  • Hesketh EL [9]
  • Lawson DM [9]
  • Lomonossoff GP [9]
  • Ranson NA [9]
  • Doerschuk PC [8]
  • Wang Q [8]
  • Zheng Y [8]
  • Khayat R [4]
  • Lander GC [4]
  • Ribeiro JRS [2]
  • Scarff CA [2]
  • Baker TS [1]
  • Bothner B [1]
  • Campbell MG [1]
  • Carragher B [1]
  • Cheng A [1]
  • Kearney BM [1]
  • Lee KK [1]
  • Potter CS [1]
  • Tang J [1]
  • Veesler D [1]
  • Yeager M [1]

Author by ORCID

  • Matsui T [12]
  • Ranson NA [9]
  • Castells-graells R [9]
  • Hesketh EL [9]
  • Lawson DM [9]
  • Lomonossoff GP [9]
  • Domitrovic T [8]
  • Johnson JE [5]
  • Lander GC [4]
  • Scarff CA [2]
  • Baker TS [1]
  • Campbell MG [1]
  • Kearney BM [1]

Journal

  • J STRUCT BIOL [9]
  • TO BE PUBLISHED [7]
  • PNAS [4]
  • COMMUN BIOL [2]
  • J MOL BIOL [1]

Software

  • RELION [10]
  • EMAN [4]
  • AUTO3DEM [1]

Microscope

  • FEI TECNAI F20 [13]
  • FEI TITAN KRIOS [9]
  • FEI/PHILIPS CM200FEG [1]

Electron Source

  • FIELD EMISSION GUN [23]

Film or detector model

  • FEI FALCON III 4K X 4K [9]
  • GATAN K2 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • InterPro [8]
  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • Gene Ontology [6]
  • EMPIAR [5]
  • SCOP2 [1]
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Showing 1 - 10 of 23. Page 1 of 3
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EMD-15112
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Raw data
EMPIAR-11060
Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 insect cell expressed VLPs
Release date: Dec. 28, 2022
Resolution: 3.92 Å
EM Method: Single-particle
Fitted PDBs: 8a3c
Q-score: 0.369

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15134
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3D View
Raw data
EMPIAR-11065
Nudaurelia capensis omega virus procapsid at pH7.6 insect cell expressed VLPs
Release date: Dec. 28, 2022
Resolution: 4.88 Å
EM Method: Single-particle
Fitted PDBs: 8a41
Q-score: 0.259

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15209
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Raw data
EMPIAR-11082 EMPIAR-11083
Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 insect cell expressed VLPs
Release date: Dec. 28, 2022
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 8a6j
Q-score: 0.211

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15266
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3D View
Nudaurelia capensis omega virus maturation intermediates captured at pH5.6 insect cell expressed VLPs : consensus map
Release date: Dec. 28, 2022
Resolution: 3.39 Å
EM Method: Single-particle

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15307
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3D View
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 insect cell expressed VLPs : small class from symmetry expansion
Release date: Dec. 28, 2022
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 8aay
Q-score: 0.527

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15339
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3D View
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 insect cell expressed VLPs : medium class from symmetry expansion
Release date: Dec. 28, 2022
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 8ac6
Q-score: 0.402

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-15348
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3D View
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 insect cell expressed VLPs : large class from symmetry expansion
Release date: Dec. 28, 2022
Resolution: 3.91 Å
EM Method: Single-particle
Fitted PDBs: 8ach
Q-score: 0.302

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

To Be Published

EMD-11830
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Raw data
EMPIAR-10560
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana
Release date: Aug. 25, 2021
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 7anm
Q-score: 0.652

Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

Commun Biol (2021) 4 pp. 619-619 [ DOI: doi:10.1038/s42003-021-02134-w Pubmed: 34031522 ]

EMD-11911
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Raw data
EMPIAR-10555
Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana
Release date: Aug. 25, 2021
Resolution: 6.63 Å
EM Method: Single-particle
Fitted PDBs: 7ata
Q-score: 0.165

Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

Commun Biol (2021) 4 pp. 619-619 [ DOI: doi:10.1038/s42003-021-02134-w Pubmed: 34031522 ]

EMD-2791
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Near-atomic resolution reconstruction of Nudaurelia capensis omega virus NwV using a mid-range electron microscope operated at 200 kV
Release date: Dec. 24, 2014
Resolution: 3.7 Å
EM Method: Single-particle

Campbell MG, Kearney BM, Cheng A, Potter CS, Potter CS, Carragher B, Veesler D

J Struct Biol (2014) 188 pp. 183-187 [ DOI: doi:10.1016/j.jsb.2014.09.008 Pubmed: 25278130 ]

Sort by: Download
Showing 1 - 10 of 23. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [23]

Current status

  • REL [23]

Sample type

  • Virus [23]
  • Sample [14]
  • Protein [9]

Organism

  • Nudaurelia capensis omega virus [23]

EM Method

  • Single-particle [23]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [2]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [5]
  • ≥ 20Å and < 30Å [4]

Model molecular weight

  • > 10 MDa [8]

Release Date

  • 2022 [7]
  • 2021 [2]
  • 2014 [1]
  • 2013 [8]
  • 2012 [4]
  • 2010 [1]

Author by name

  • Johnson JE [23]
  • Matsui T [12]
  • Domitrovic T [10]
  • Castells-graells R [9]
  • Hesketh EL [9]
  • Lawson DM [9]
  • Lomonossoff GP [9]
  • Ranson NA [9]
  • Doerschuk PC [8]
  • Wang Q [8]
  • Zheng Y [8]
  • Khayat R [4]
  • Lander GC [4]
  • Ribeiro JRS [2]
  • Scarff CA [2]
  • Baker TS [1]
  • Bothner B [1]
  • Campbell MG [1]
  • Carragher B [1]
  • Cheng A [1]
  • Kearney BM [1]
  • Lee KK [1]
  • Potter CS [1]
  • Tang J [1]
  • Veesler D [1]
  • Yeager M [1]

Author by ORCID

  • Matsui T [12]
  • Ranson NA [9]
  • Castells-graells R [9]
  • Hesketh EL [9]
  • Lawson DM [9]
  • Lomonossoff GP [9]
  • Domitrovic T [8]
  • Johnson JE [5]
  • Lander GC [4]
  • Scarff CA [2]
  • Baker TS [1]
  • Campbell MG [1]
  • Kearney BM [1]

Journal

  • J STRUCT BIOL [9]
  • TO BE PUBLISHED [7]
  • PNAS [4]
  • COMMUN BIOL [2]
  • J MOL BIOL [1]

Software

  • RELION [10]
  • EMAN [4]
  • AUTO3DEM [1]

Microscope

  • FEI TECNAI F20 [13]
  • FEI TITAN KRIOS [9]
  • FEI/PHILIPS CM200FEG [1]

Electron Source

  • FIELD EMISSION GUN [23]

Film or detector model

  • FEI FALCON III 4K X 4K [9]
  • GATAN K2 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • InterPro [8]
  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • Gene Ontology [6]
  • EMPIAR [5]
  • SCOP2 [1]