Electron Microscopy Data Bank

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grant_funding_details:"Welch Foundation"

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Current Database

Current status

Sample type

Organism

Homo sapiens [169]
Mus musculus [75]
Escherichia coli [43]
Streptococcus pyogenes [29]
Saccharomyces cerevisiae [27]
Saccharomyces cerevisiae [27]
Listeria innocua [24]
Synthetic construct [24]
Enterobacteria phage t4 [18]
Escherichia phage lambda [15]
Escherichia virus qbeta [12]
Nipah virus [10]
Clostridioides difficile [9]
Pseudomonas aeruginosa [9]
[eubacterium] siraeum [8]
Pleurotus ostreatus [8]
Saccharomyces cerevisiae [8]
Vibrio cholerae [8]
Gallus gallus [8]
Rattus norvegicus [7]
Fako virus [7]
Francisella tularensis [7]
Neospora caninum [6]
Cricetulus griseus [5]
Human metapneumovirus [5]
Mycolicibacterium smegmatis [5]
Schistosoma mansoni [5]
Synechococcus sp. wh 8109 [4]
Listeria monocytogenes [4]
Dictyostelium discoideum [4]
Bacteriophage sp. [4]
Escherichia coli [4]
Synechocystis sp. pcc 6803 [3]
Escherichia phage ms2 [3]
Sulfuricurvum sp. pc08-66 [3]
Severe acute respiratory syndrome coronavirus [3]
(no species) [3]
Escherichia coli [3]
Caenorhabditis elegans [3]
Porphyromonas gingivalis [3]
Traversvirus tv933w [2]
Borrelia burgdorferi [2]
Rotavirus a [2]
Langya virus [2]
Aspergillus fischeri [2]
Rhizobium meliloti [2]
Legionella pneumophila [2]
Streptomyces venezuelae [2]
(no species) [2]
Hendra henipavirus [2]
Vibrio parahaemolyticus [2]
Mammalian orthoreovirus [1]
Eastern equine encephalitis virus [1]
Ectromelia virus [1]
Saccharomyces cerevisiae [1]
Severe acute respiratory syndrome coronavirus [1]
Mycobacterium tuberculosis [1]
Human respiratory syncytial virus [1]
Helicobacter pylori [1]
Mycobacterium sp. js623 [1]
Metagenome [1]
Ectromelia virus [1]
Thermus thermophilus [1]
Streptococcus pyogenes [1]
Escherichia coli [1]
512285 [1]
Neurospora crassa [1]
Parasutterella secunda [1]
Drosophila melanogaster [1]
Haliangium ochraceum [1]
Mycobacterium tuberculosis [1]
Xenopus laevis [1]
Xenopus tropicalis [1]
Alkalihalobacillus halodurans [1]
Desulfovibrio vulgaris [1]
Lama glama [1]
Bos taurus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Taylor DW [68]
Gagnon MG [62]
Jiang Y [52]
Zeng W [48]
Bravo JPK [44]
Han Y [42]
Li X [40]
Bai XC [39]
Basu RS [34]
Fung HYJ [33]
Hibshman GN [29]
Zhang J [29]
Chook YM [28]
Cruz VE [28]
Erzberger JP [28]
Finkelstein IJ [28]
Chen Z [27]
Rybak MY [27]
Weirich CS [27]
Dangerfield TL [26]
Elghobashi-meinhardt N [26]
Johnson KA [26]
Niesman AB [26]
Seely SM [25]
Xue J [25]
Donnelly L [24]
Li Y [24]
Qi X [22]
Mclellan JS [21]
Peddada N [21]
Zhang H [20]
Bai X [19]
Chen H [19]
Chen Q [19]
Hibbs RE [19]
Jiou J [19]
Teng J [19]
Hooper MM [18]
Li L [18]
Howard RJ [17]
Lin J [17]
Lindahl E [17]
Long T [17]
Noviello CM [17]
Chiu W [16]
Shakya B [16]
Sekulski K [15]
Wang Y [15]
Zhuang Y [15]
Blade EG [14]
Byrne PO [14]
Jakana J [14]
Yu H [14]
Zhang X [14]
Zhu S [14]
Chang JY [13]
Graham BS [13]
Schmiege P [13]
She J [13]
Sun Y [13]
Wang Z [13]
Ambrozak DR [12]
Chen M [12]
Fisher BE [12]
Gan N [12]
Gharpure A [12]
Gorzelnik KV [12]
Gui L [12]
Guo J [12]
Jiang M [12]
Loomis RJ [12]
Ludtke SJ [12]
Nicastro D [12]
Radhakrishnan A [12]
Reetz E [12]
Walsh Jr Rm [12]
Bernardes NE [11]
Cui Z [11]
Fine M [10]
Fregoso Ocampo R [10]
Kim JJ [10]
Balasubramanian S [9]
Cansizoglu AE [9]
Chou CW [9]
Mccool RS [9]
Mittal SR [9]
Rout MP [9]
Sailer C [9]
Sherman MB [9]
Shi Z [9]
Stengel F [9]
Yoshizawa T [9]
Auguste AJ [8]
Cohen JC [8]
Esparza L [8]
Gao H [8]
Hobbs HH [8]
Kaelber JT [8]
Ready JM [8]
Shang G [8]

Author by ORCID

Taylor DW [62]
Gagnon MG [54]
Han Y [40]
Li X [39]
Bai XC [38]
Fung HYJ [33]
Jiang Y [29]
Cruz VE [28]
Erzberger JP [28]
Weirich CS [27]
Elghobashi-meinhardt N [26]
Chook YM [26]
Niesman AB [26]
Xue J [25]
Finkelstein IJ [25]
Rybak MY [24]
Hibshman GN [22]
Mclellan JS [21]
Jiou J [19]
Zhang J [19]
Chen Z [18]
Lin J [17]
Li L [17]
Hooper MM [16]
Sekulski K [15]
Zhuang Y [15]
Byrne PO [14]
Chiu W [14]
Chen H [13]
Bravo JPK [13]
Howard RJ [13]
Hibbs RE [13]
Gan N [12]
Gharpure A [12]
Radhakrishnan A [12]
Walsh Jr Rm [12]
Gorzelnik KV [12]
Chen M [12]
Peddada N [12]
Schmiege P [11]
Li Y [11]
Bernardes NE [11]
Cui Z [11]
Qi X [10]
Ludtke SJ [10]
Wang Z [10]
Sailer C [9]
Mittal SR [9]
Zhang X [9]
Yu H [9]
Balasubramanian S [9]
Stengel F [9]
Rout MP [9]
Chou CW [8]
Smothers J [8]
Gao H [8]
Hobbs HH [8]
Shi Z [8]
Cohen JC [8]
Lapalombella R [7]
Daelemans D [7]
Wang R [7]
Young R [7]
Gharghabi M [7]
Mccool RS [7]
Wing CE [7]
Johnson KA [7]
Cagatay T [7]
Ready JM [7]
Jacquemyn M [7]
Kwanten B [7]
Permentier B [7]
Ramos DA [7]
Loomis RJ [6]
Graham BS [6]
Marcotte EM [6]
Auguste AJ [6]
Reese ML [6]
Kaelber JT [6]
Nicastro D [6]
Zhou Y [6]
Tsybovsky Y [6]
Gui L [6]
Liu MS [6]
Shinde O [6]
Johnson AW [6]
Cai K [6]
O'shaughnessy WJ [6]
Guo J [6]
Uchikawa E [6]
Lee CH [6]
Donnelly L [6]
Ramamohan AR [6]
Collins 3Rd Jj [5]
Blaza JN [5]
Schneider C [5]
Kiernan KA [5]
Stephens DR [5]
Ekemezie CL [5]
Hill CH [5]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-72967

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Hna Monomer

Release date: Dec. 10, 2025
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 9yhn
Q-score: 0.396

Hooper MM, Hoover BT, Zhang H, Franco AS, Finkelstein IJ, Taylor DW

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.12.688083 Pubmed: 41292825 ]

EMD-73047

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Hna Dimer

Release date: Dec. 10, 2025
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 9ykj
Q-score: 0.328

Hooper MM, Hoover BT, Zhang H, Franco AS, Finkelstein IJ, Taylor DW

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.12.688083 Pubmed: 41292825 ]

EMD-70458

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Cryo-EM structure of human full-length XPO1 unliganded

Release date: Nov. 26, 2025
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 9og9
Q-score: 0.504

Wing CE, Fung HYJ, Kwanten B, Cagatay T, Niesman AB, Jacquemyn M, Gharghabi M, Permentier B, Shakya B, Nandi R, Ready JM, Kashyap T, Shacham S, Landesman Y, Lapalombella R, Daelemans D, Chook YM

bioRxiv (2025) [ Pubmed: 39416201 DOI: doi:10.1101/2024.10.07.617049 ]

EMD-70459

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Cryo-EM structure of human full-length XPO1 conjugated with selinexor

Release date: Nov. 26, 2025
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 9oga
Q-score: 0.42

Wing CE, Fung HYJ, Kwanten B, Cagatay T, Niesman AB, Jacquemyn M, Gharghabi M, Permentier B, Shakya B, Nandi R, Ready JM, Kashyap T, Shacham S, Landesman Y, Lapalombella R, Daelemans D, Chook YM

bioRxiv (2025) [ Pubmed: 39416201 DOI: doi:10.1101/2024.10.07.617049 ]

EMD-70460

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Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to yeast RAN-GTP and human ASB8-ELOB/C

Release date: Nov. 26, 2025
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 9ogb
Q-score: 0.406

Wing CE, Fung HYJ, Kwanten B, Cagatay T, Niesman AB, Jacquemyn M, Gharghabi M, Permentier B, Shakya B, Nandi R, Ready JM, Kashyap T, Shacham S, Landesman Y, Lapalombella R, Daelemans D, Chook YM

bioRxiv (2025) [ Pubmed: 39416201 DOI: doi:10.1101/2024.10.07.617049 ]

EMD-70461

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Cryo-EM structure of human exportin-1 conjugated with KPT-185 and bound to human ASB8-ELOB/C

Release date: Nov. 26, 2025
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 9ogc
Q-score: 0.395

Wing CE, Fung HYJ, Kwanten B, Cagatay T, Niesman AB, Jacquemyn M, Gharghabi M, Permentier B, Shakya B, Nandi R, Ready JM, Kashyap T, Shacham S, Landesman Y, Lapalombella R, Daelemans D, Chook YM

bioRxiv (2025) [ Pubmed: 39416201 DOI: doi:10.1101/2024.10.07.617049 ]

EMD-70462

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Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to human ASB8 R197A -ELOB/C

Release date: Nov. 26, 2025
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 9ogd
Q-score: 0.571

Wing CE, Fung HYJ, Kwanten B, Cagatay T, Niesman AB, Jacquemyn M, Gharghabi M, Permentier B, Shakya B, Nandi R, Ready JM, Kashyap T, Shacham S, Landesman Y, Lapalombella R, Daelemans D, Chook YM

bioRxiv (2025) [ Pubmed: 39416201 DOI: doi:10.1101/2024.10.07.617049 ]

EMD-70463

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Cryo-EM structure of human exportin-1 conjugated with KPT-127 and bound to human ASB8-ELOB/C

Release date: Nov. 26, 2025
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9oge
Q-score: 0.412

Wing CE, Fung HYJ, Kwanten B, Cagatay T, Niesman AB, Jacquemyn M, Gharghabi M, Permentier B, Shakya B, Nandi R, Ready JM, Kashyap T, Shacham S, Landesman Y, Lapalombella R, Daelemans D, Chook YM

bioRxiv (2025) [ Pubmed: 39416201 DOI: doi:10.1101/2024.10.07.617049 ]

EMD-70464

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Cryo-EM structure of human exportin-1 conjugated with KPT-UTSW1 and bound to human ASB8-ELOB/C

Release date: Nov. 26, 2025
Resolution: 4.21 Å
EM Method: Single-particle
Fitted PDBs: 9ogf
Q-score: 0.241

Wing CE, Fung HYJ, Kwanten B, Cagatay T, Niesman AB, Jacquemyn M, Gharghabi M, Permentier B, Shakya B, Nandi R, Ready JM, Kashyap T, Shacham S, Landesman Y, Lapalombella R, Daelemans D, Chook YM

bioRxiv (2025) [ Pubmed: 39416201 DOI: doi:10.1101/2024.10.07.617049 ]

EMD-47892

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Wild-type EsCas13d binary complex

Release date: Nov. 19, 2025
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 9ebu
Q-score: 0.508

Chou CW, Finkelstein IJ

To Be Published

Sort by: Download

Showing 1 - 10 of 497. Page 1 of 50

Display:

Statistics

Download

Select database:

EMDB [497]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [169]
Mus musculus [75]
Escherichia coli [43]
Streptococcus pyogenes [29]
Saccharomyces cerevisiae [27]
Saccharomyces cerevisiae [27]
Listeria innocua [24]
Synthetic construct [24]
Enterobacteria phage t4 [18]
Escherichia phage lambda [15]
Escherichia virus qbeta [12]
Nipah virus [10]
Clostridioides difficile [9]
Pseudomonas aeruginosa [9]
[eubacterium] siraeum [8]
Pleurotus ostreatus [8]
Saccharomyces cerevisiae [8]
Vibrio cholerae [8]
Gallus gallus [8]
Rattus norvegicus [7]
Fako virus [7]
Francisella tularensis [7]
Neospora caninum [6]
Cricetulus griseus [5]
Human metapneumovirus [5]
Mycolicibacterium smegmatis [5]
Schistosoma mansoni [5]
Synechococcus sp. wh 8109 [4]
Listeria monocytogenes [4]
Dictyostelium discoideum [4]
Bacteriophage sp. [4]
Escherichia coli [4]
Synechocystis sp. pcc 6803 [3]
Escherichia phage ms2 [3]
Sulfuricurvum sp. pc08-66 [3]
Severe acute respiratory syndrome coronavirus [3]
(no species) [3]
Escherichia coli [3]
Caenorhabditis elegans [3]
Porphyromonas gingivalis [3]
Traversvirus tv933w [2]
Borrelia burgdorferi [2]
Rotavirus a [2]
Langya virus [2]
Aspergillus fischeri [2]
Rhizobium meliloti [2]
Legionella pneumophila [2]
Streptomyces venezuelae [2]
(no species) [2]
Hendra henipavirus [2]
Vibrio parahaemolyticus [2]
Mammalian orthoreovirus [1]
Eastern equine encephalitis virus [1]
Ectromelia virus [1]
Saccharomyces cerevisiae [1]
Severe acute respiratory syndrome coronavirus [1]
Mycobacterium tuberculosis [1]
Human respiratory syncytial virus [1]
Helicobacter pylori [1]
Mycobacterium sp. js623 [1]
Metagenome [1]
Ectromelia virus [1]
Thermus thermophilus [1]
Streptococcus pyogenes [1]
Escherichia coli [1]
512285 [1]
Neurospora crassa [1]
Parasutterella secunda [1]
Drosophila melanogaster [1]
Haliangium ochraceum [1]
Mycobacterium tuberculosis [1]
Xenopus laevis [1]
Xenopus tropicalis [1]
Alkalihalobacillus halodurans [1]
Desulfovibrio vulgaris [1]
Lama glama [1]
Bos taurus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Taylor DW [68]
Gagnon MG [62]
Jiang Y [52]
Zeng W [48]
Bravo JPK [44]
Han Y [42]
Li X [40]
Bai XC [39]
Basu RS [34]
Fung HYJ [33]
Hibshman GN [29]
Zhang J [29]
Chook YM [28]
Cruz VE [28]
Erzberger JP [28]
Finkelstein IJ [28]
Chen Z [27]
Rybak MY [27]
Weirich CS [27]
Dangerfield TL [26]
Elghobashi-meinhardt N [26]
Johnson KA [26]
Niesman AB [26]
Seely SM [25]
Xue J [25]
Donnelly L [24]
Li Y [24]
Qi X [22]
Mclellan JS [21]
Peddada N [21]
Zhang H [20]
Bai X [19]
Chen H [19]
Chen Q [19]
Hibbs RE [19]
Jiou J [19]
Teng J [19]
Hooper MM [18]
Li L [18]
Howard RJ [17]
Lin J [17]
Lindahl E [17]
Long T [17]
Noviello CM [17]
Chiu W [16]
Shakya B [16]
Sekulski K [15]
Wang Y [15]
Zhuang Y [15]
Blade EG [14]
Byrne PO [14]
Jakana J [14]
Yu H [14]
Zhang X [14]
Zhu S [14]
Chang JY [13]
Graham BS [13]
Schmiege P [13]
She J [13]
Sun Y [13]
Wang Z [13]
Ambrozak DR [12]
Chen M [12]
Fisher BE [12]
Gan N [12]
Gharpure A [12]
Gorzelnik KV [12]
Gui L [12]
Guo J [12]
Jiang M [12]
Loomis RJ [12]
Ludtke SJ [12]
Nicastro D [12]
Radhakrishnan A [12]
Reetz E [12]
Walsh Jr Rm [12]
Bernardes NE [11]
Cui Z [11]
Fine M [10]
Fregoso Ocampo R [10]
Kim JJ [10]
Balasubramanian S [9]
Cansizoglu AE [9]
Chou CW [9]
Mccool RS [9]
Mittal SR [9]
Rout MP [9]
Sailer C [9]
Sherman MB [9]
Shi Z [9]
Stengel F [9]
Yoshizawa T [9]
Auguste AJ [8]
Cohen JC [8]
Esparza L [8]
Gao H [8]
Hobbs HH [8]
Kaelber JT [8]
Ready JM [8]
Shang G [8]

Author by ORCID

Taylor DW [62]
Gagnon MG [54]
Han Y [40]
Li X [39]
Bai XC [38]
Fung HYJ [33]
Jiang Y [29]
Cruz VE [28]
Erzberger JP [28]
Weirich CS [27]
Elghobashi-meinhardt N [26]
Chook YM [26]
Niesman AB [26]
Xue J [25]
Finkelstein IJ [25]
Rybak MY [24]
Hibshman GN [22]
Mclellan JS [21]
Jiou J [19]
Zhang J [19]
Chen Z [18]
Lin J [17]
Li L [17]
Hooper MM [16]
Sekulski K [15]
Zhuang Y [15]
Byrne PO [14]
Chiu W [14]
Chen H [13]
Bravo JPK [13]
Howard RJ [13]
Hibbs RE [13]
Gan N [12]
Gharpure A [12]
Radhakrishnan A [12]
Walsh Jr Rm [12]
Gorzelnik KV [12]
Chen M [12]
Peddada N [12]
Schmiege P [11]
Li Y [11]
Bernardes NE [11]
Cui Z [11]
Qi X [10]
Ludtke SJ [10]
Wang Z [10]
Sailer C [9]
Mittal SR [9]
Zhang X [9]
Yu H [9]
Balasubramanian S [9]
Stengel F [9]
Rout MP [9]
Chou CW [8]
Smothers J [8]
Gao H [8]
Hobbs HH [8]
Shi Z [8]
Cohen JC [8]
Lapalombella R [7]
Daelemans D [7]
Wang R [7]
Young R [7]
Gharghabi M [7]
Mccool RS [7]
Wing CE [7]
Johnson KA [7]
Cagatay T [7]
Ready JM [7]
Jacquemyn M [7]
Kwanten B [7]
Permentier B [7]
Ramos DA [7]
Loomis RJ [6]
Graham BS [6]
Marcotte EM [6]
Auguste AJ [6]
Reese ML [6]
Kaelber JT [6]
Nicastro D [6]
Zhou Y [6]
Tsybovsky Y [6]
Gui L [6]
Liu MS [6]
Shinde O [6]
Johnson AW [6]
Cai K [6]
O'shaughnessy WJ [6]
Guo J [6]
Uchikawa E [6]
Lee CH [6]
Donnelly L [6]
Ramamohan AR [6]
Collins 3Rd Jj [5]
Blaza JN [5]
Schneider C [5]
Kiernan KA [5]
Stephens DR [5]
Ekemezie CL [5]
Hill CH [5]

Journal

Software

Microscope

Electron Source

Film or detector model

External links