Electron Microscopy Data Bank

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grant_funding_details:"Spanish Ministry of Science, Innovation, and Universities"

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Current Database

Current status

Sample type

Organism

Homo sapiens [60]
Lactococcus lactis [10]
Rattus norvegicus [9]
Mycolicibacterium smegmatis [9]
Saccharomyces cerevisiae [9]
Severe acute respiratory syndrome coronavirus [7]
Synthetic construct [7]
Rabbit hemorrhagic disease virus [6]
Escherichia virus t7 [5]
Rhinovirus b [5]
Saccharomyces cerevisiae [5]
Severe acute respiratory syndrome coronavirus [5]
(no species) [4]
Staphylococcus aureus [4]
Rotavirus a [4]
Influenza a virus [4]
Escherichia coli [4]
Stichodactyla helianthus [4]
Rodent protoparvovirus 1 [3]
Geobacillus stearothermophilus [3]
Clostridioides difficile [3]
Mycoplasma genitalium [3]
Galleria mellonella [3]
Epstein-barr virus (strain gd1) [2]
Enterobacteria phage t4 [2]
Turnip mosaic virus (strain japanese) [2]
Bacillus thuringiensis [2]
Actinia fragacea [2]
Gallus gallus [2]
Oryctolagus cuniculus [2]
Mus musculus [1]
African swine fever virus [1]
African swine fever virus [1]
Human mastadenovirus f [1]
Influenza a virus [1]
(no species) [1]
Human mastadenovirus c [1]
1513458 [1]
Pseudomonas putida [1]
2094187 [1]
Mycoplasma pneumoniae [1]
Human mastadenovirus c [1]
(no species) [1]
Pseudomonas aeruginosa [1]
Lagovirus europaeus [1]
Carnobacterium sp. at7 [1]
Trypanosoma brucei [1]
Acanthamoeba castellanii [1]
Rosellinia necatrix [1]
Lama glama [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Gil-carton D [33]
Valpuesta JM [31]
Cuellar J [29]
Caston JR [28]
Santiago C [27]
Lopez-alonso JP [25]
Mata CP [23]
Luque D [19]
Llorca O [16]
Melero R [16]
Valle M [16]
Arranz R [15]
Fernandez-tornero C [15]
Plaza-pegueroles A [15]
Lazaro M [14]
Maestro-lopez M [14]
Martin-benito J [14]
Arias-palomo E [13]
Ubarretxena-belandia I [13]
Gomis-ruth FX [12]
Goulas T [12]
Mendes SR [12]
Tascon I [12]
Azem A [11]
Berruezo AG [11]
Fernandez-leiro R [11]
Gil D [11]
Gomez-llorente Y [11]
Hirsch JA [11]
Jebara F [11]
Malik R [11]
Martinez-romero JM [11]
Patra M [11]
Shkolnisky Y [11]
Vilchez-garcia J [11]
Carlero D [10]
Chacon P [10]
Choi PH [10]
Martinez M [10]
Perez-mata C [10]
Ruiz FM [10]
Tong L [10]
Vilas JL [10]
Bueno-carrasco MT [9]
Carazo JM [9]
Flydal MI [9]
Hou P [9]
Marcilla M [9]
Martinez A [9]
Muntaner J [9]
Novoa G [9]
Santos-aledo A [9]
Sanz-murillo M [9]
Sorzano COS [9]
Wang D [9]
Xu J [9]
Degliesposti G [8]
Forcada-nadal A [8]
Geller R [8]
Llacer JL [8]
Lopez-redondo ML [8]
Marina A [8]
Mateu MG [8]
Rubio V [8]
Skehel JM [8]
Valbuena A [8]
Bravo J [7]
Carrascosa JL [7]
Cuervo A [7]
Gougeard N [7]
Gutierrez-seijo J [7]
Marco-marin C [7]
Moreno-paz M [7]
Moro F [7]
Muga A [7]
Parro V [7]
Sanchez-pulido L [7]
Severino R [7]
Velasco-carneros L [7]
De Pablo Pj [7]
Alonso M [6]
Alvira S [6]
Araujo-bazan L [6]
Barcena J [6]
Berger JM [6]
Bottcher B [6]
Cheng TC [6]
Dohrke JN [6]
Famelis N [6]
Geibel S [6]
Greger IH [6]
Herguedas B [6]
Ho H [6]
Ishizaka M [6]
Kleppe R [6]
Kohegyi B [6]
Kohegyi BK [6]
Krakenes TA [6]
Krieger JM [6]
Lape R [6]

Author by ORCID

Gil-carton D [33]
Valpuesta JM [30]
Cuellar J [29]
Santiago C [27]
Lopez-alonso JP [25]
Caston JR [25]
Luque D [19]
Mata CP [19]
Fernandez-tornero C [15]
Arranz R [15]
Llorca O [15]
Melero R [14]
Maestro-lopez M [14]
Martin-benito J [14]
Arias-palomo E [13]
Lazaro M [13]
Ubarretxena-belandia I [13]
Gomis-ruth FX [12]
Goulas T [12]
Mendes SR [12]
Tascon I [12]
Berruezo AG [11]
Hirsch JA [11]
Shkolnisky Y [11]
Azem A [11]
Vilchez-garcia J [11]
Gomez-llorente Y [11]
Malik R [11]
Fernandez-leiro R [11]
Tong L [10]
Chacon P [10]
Carlero D [10]
Choi PH [10]
Martinez M [10]
Marcilla M [9]
Santos-aledo A [9]
Ruiz FM [9]
Valle M [9]
Wang D [9]
Novoa G [9]
Flydal MI [9]
Hou P [9]
Sanz-murillo M [9]
Bueno-carrasco MT [9]
Martinez A [9]
Xu J [9]
Degliesposti G [8]
Marina A [8]
Bravo J [7]
Severino R [7]
Cuervo A [7]
Velasco-carneros L [7]
Sanchez-pulido L [7]
Moreno-paz M [7]
Parro V [7]
Gutierrez-seijo J [7]
Barcena J [6]
Krieger JM [6]
Valle M [6]
Krakenes TA [6]
Famelis N [6]
Martinez-romero JM [6]
Spinola-amilibia M [6]
Menendez M [6]
Lopez-blanco JR [6]
Shaikh SA [6]
Teigen K [6]
Greger IH [6]
Bottcher B [6]
Sakata E [6]
Watson JF [6]
Geibel S [6]
Ishizaka M [6]
Ho H [6]
Herguedas B [6]
Rivera-calzada A [6]
Tomko Jr Rj [6]
Cheng TC [6]
Alvira S [6]
Perez-mata C [6]
Carazo JM [5]
Machon C [5]
Gil C [5]
Perez-ruiz M [5]
Nguyen PQ [5]
Asif-laidin A [5]
Gil-cantero D [5]
Munier S [5]
Marabini R [5]
Masiulis S [5]
Fabrega-ferrer M [5]
Rivera-de-torre E [5]
Acker J [5]
Plaza-pegueroles A [5]
Coscolla M [5]
Lesage P [5]
Palacios-ortega J [5]
Capuzzi B [5]
Ginex T [5]
Ortin J [5]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-57363

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HRV K4058A mutant

CryoEM

Release date: July 15, 2026
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 29ti
Q-score: 0.487

Martinez-Romero JM, Valiente L, Vilas JL, Riomoros-Barahona V, Valbuena A, Mateu MG, Caston JR

J Mol Biol (2026) pp. 169936-169936 [ DOI: doi:10.1016/j.jmb.2026.169936 Pubmed: 42401367 ]

EMD-57371

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HRV K2052A mutant

CryoEM

Release date: July 15, 2026
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 29tx
Q-score: 0.514

Martinez-Romero JM, Valiente L, Vilas JL, Riomoros-Barahona V, Valbuena A, Mateu MG, Caston JR

J Mol Biol (2026) pp. 169936-169936 [ DOI: doi:10.1016/j.jmb.2026.169936 Pubmed: 42401367 ]

EMD-57375

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HRV B14 virion

CryoEM

Release date: July 15, 2026
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 29ub
Q-score: 0.583

Martinez-Romero JM, Valiente L, Vilas JL, Riomoros-Barahona V, Valbuena A, Mateu MG, Caston JR

J Mol Biol (2026) pp. 169936-169936 [ DOI: doi:10.1016/j.jmb.2026.169936 Pubmed: 42401367 ]

EMD-54939

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Solution structure of Clostridioides difficile CspB protein determined by CryoEM

CryoEM

Release date: June 17, 2026
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 9sj7
Q-score: 0.545

Alcorlo M, Hermoso J

To Be Published

EMD-54941

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Solution structure of Clostridioides difficile CspA protein in complex with CspC and Taurocholate, determined by CryoEM

CryoEM

Release date: June 17, 2026
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 9sj9
Q-score: 0.617

Alcorlo M, Hermoso J

To Be Published

EMD-54942

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Solution structure of Clostridioides difficile CspB oligomer determined by CryoEM

CryoEM

Release date: June 17, 2026
Resolution: 2.75 Å
EM Method: Helical reconstruction
Fitted PDBs: 9sjb
Q-score: 0.565

Alcorlo M, Hermoso J

To Be Published

EMD-53922

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Cryo-EM structure of Yadonushi Virus 1

CryoEM

Release date: June 10, 2026
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 9rch
Q-score: 0.689

Novoa G, Suzuki N, Caston JR

To Be Published

EMD-54176

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CryoEM structure of the spike S protein trimer of the omicron BA.1 variant prepared in the presence of compound II-Na salt

CryoEM

Release date: May 6, 2026
Resolution: 6.25 Å
EM Method: Single-particle

Marti-Mari O, Moreno-Simoni M, Aviles-Alia AI, Rusu L, Forcada-Nadal A, Adhav A, Lopez-Redondo ML, Blazquez AB, Esteban A, Jimenez de Oya N, Marina A, Rubio V, Llacer JL, Gago F, Martin-Acebes MA, Perez-Perez MJ, Geller R, San-Felix A

Acs Omega (2025) 10 pp. 56830-56844 [ Pubmed: 41322621 DOI: doi:10.1021/acsomega.5c10442 ]

EMD-53569

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CryoEM structure of MraZ in complex with its promoter from Mycoplasma genitalium

CryoEM

Release date: Feb. 4, 2026
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 9r4j
Q-score: 0.45

Sanchez-Alba L, Varejao N, Durand A, Garcia-Pardo J, Carreras-Caballe M, Amador V, Pinyol J, Reverter D

Nat Commun (2026) 17 [ DOI: doi:10.1038/s41467-026-68809-2 Pubmed: 41611686 ]

EMD-55332

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CryoEM structure of the octamer MraZ in complex with 1 box promoter from Mycoplasma genitalium

CryoEM

Release date: Feb. 4, 2026
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 9sx6
Q-score: 0.431

Sanchez-Alba L, Varejao N, Durand A, Garcia-Pardo J, Carreras-Caballe M, Amador V, Pinyol J, Reverter D

Nat Commun (2026) 17 [ DOI: doi:10.1038/s41467-026-68809-2 Pubmed: 41611686 ]

Sort by: Download

Showing 1 - 10 of 190. Page 1 of 19

Display:

Statistics

Download

Select database:

EMDB [190]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [60]
Lactococcus lactis [10]
Rattus norvegicus [9]
Mycolicibacterium smegmatis [9]
Saccharomyces cerevisiae [9]
Severe acute respiratory syndrome coronavirus [7]
Synthetic construct [7]
Rabbit hemorrhagic disease virus [6]
Escherichia virus t7 [5]
Rhinovirus b [5]
Saccharomyces cerevisiae [5]
Severe acute respiratory syndrome coronavirus [5]
(no species) [4]
Staphylococcus aureus [4]
Rotavirus a [4]
Influenza a virus [4]
Escherichia coli [4]
Stichodactyla helianthus [4]
Rodent protoparvovirus 1 [3]
Geobacillus stearothermophilus [3]
Clostridioides difficile [3]
Mycoplasma genitalium [3]
Galleria mellonella [3]
Epstein-barr virus (strain gd1) [2]
Enterobacteria phage t4 [2]
Turnip mosaic virus (strain japanese) [2]
Bacillus thuringiensis [2]
Actinia fragacea [2]
Gallus gallus [2]
Oryctolagus cuniculus [2]
Mus musculus [1]
African swine fever virus [1]
African swine fever virus [1]
Human mastadenovirus f [1]
Influenza a virus [1]
(no species) [1]
Human mastadenovirus c [1]
1513458 [1]
Pseudomonas putida [1]
2094187 [1]
Mycoplasma pneumoniae [1]
Human mastadenovirus c [1]
(no species) [1]
Pseudomonas aeruginosa [1]
Lagovirus europaeus [1]
Carnobacterium sp. at7 [1]
Trypanosoma brucei [1]
Acanthamoeba castellanii [1]
Rosellinia necatrix [1]
Lama glama [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Gil-carton D [33]
Valpuesta JM [31]
Cuellar J [29]
Caston JR [28]
Santiago C [27]
Lopez-alonso JP [25]
Mata CP [23]
Luque D [19]
Llorca O [16]
Melero R [16]
Valle M [16]
Arranz R [15]
Fernandez-tornero C [15]
Plaza-pegueroles A [15]
Lazaro M [14]
Maestro-lopez M [14]
Martin-benito J [14]
Arias-palomo E [13]
Ubarretxena-belandia I [13]
Gomis-ruth FX [12]
Goulas T [12]
Mendes SR [12]
Tascon I [12]
Azem A [11]
Berruezo AG [11]
Fernandez-leiro R [11]
Gil D [11]
Gomez-llorente Y [11]
Hirsch JA [11]
Jebara F [11]
Malik R [11]
Martinez-romero JM [11]
Patra M [11]
Shkolnisky Y [11]
Vilchez-garcia J [11]
Carlero D [10]
Chacon P [10]
Choi PH [10]
Martinez M [10]
Perez-mata C [10]
Ruiz FM [10]
Tong L [10]
Vilas JL [10]
Bueno-carrasco MT [9]
Carazo JM [9]
Flydal MI [9]
Hou P [9]
Marcilla M [9]
Martinez A [9]
Muntaner J [9]
Novoa G [9]
Santos-aledo A [9]
Sanz-murillo M [9]
Sorzano COS [9]
Wang D [9]
Xu J [9]
Degliesposti G [8]
Forcada-nadal A [8]
Geller R [8]
Llacer JL [8]
Lopez-redondo ML [8]
Marina A [8]
Mateu MG [8]
Rubio V [8]
Skehel JM [8]
Valbuena A [8]
Bravo J [7]
Carrascosa JL [7]
Cuervo A [7]
Gougeard N [7]
Gutierrez-seijo J [7]
Marco-marin C [7]
Moreno-paz M [7]
Moro F [7]
Muga A [7]
Parro V [7]
Sanchez-pulido L [7]
Severino R [7]
Velasco-carneros L [7]
De Pablo Pj [7]
Alonso M [6]
Alvira S [6]
Araujo-bazan L [6]
Barcena J [6]
Berger JM [6]
Bottcher B [6]
Cheng TC [6]
Dohrke JN [6]
Famelis N [6]
Geibel S [6]
Greger IH [6]
Herguedas B [6]
Ho H [6]
Ishizaka M [6]
Kleppe R [6]
Kohegyi B [6]
Kohegyi BK [6]
Krakenes TA [6]
Krieger JM [6]
Lape R [6]

Author by ORCID

Gil-carton D [33]
Valpuesta JM [30]
Cuellar J [29]
Santiago C [27]
Lopez-alonso JP [25]
Caston JR [25]
Luque D [19]
Mata CP [19]
Fernandez-tornero C [15]
Arranz R [15]
Llorca O [15]
Melero R [14]
Maestro-lopez M [14]
Martin-benito J [14]
Arias-palomo E [13]
Lazaro M [13]
Ubarretxena-belandia I [13]
Gomis-ruth FX [12]
Goulas T [12]
Mendes SR [12]
Tascon I [12]
Berruezo AG [11]
Hirsch JA [11]
Shkolnisky Y [11]
Azem A [11]
Vilchez-garcia J [11]
Gomez-llorente Y [11]
Malik R [11]
Fernandez-leiro R [11]
Tong L [10]
Chacon P [10]
Carlero D [10]
Choi PH [10]
Martinez M [10]
Marcilla M [9]
Santos-aledo A [9]
Ruiz FM [9]
Valle M [9]
Wang D [9]
Novoa G [9]
Flydal MI [9]
Hou P [9]
Sanz-murillo M [9]
Bueno-carrasco MT [9]
Martinez A [9]
Xu J [9]
Degliesposti G [8]
Marina A [8]
Bravo J [7]
Severino R [7]
Cuervo A [7]
Velasco-carneros L [7]
Sanchez-pulido L [7]
Moreno-paz M [7]
Parro V [7]
Gutierrez-seijo J [7]
Barcena J [6]
Krieger JM [6]
Valle M [6]
Krakenes TA [6]
Famelis N [6]
Martinez-romero JM [6]
Spinola-amilibia M [6]
Menendez M [6]
Lopez-blanco JR [6]
Shaikh SA [6]
Teigen K [6]
Greger IH [6]
Bottcher B [6]
Sakata E [6]
Watson JF [6]
Geibel S [6]
Ishizaka M [6]
Ho H [6]
Herguedas B [6]
Rivera-calzada A [6]
Tomko Jr Rj [6]
Cheng TC [6]
Alvira S [6]
Perez-mata C [6]
Carazo JM [5]
Machon C [5]
Gil C [5]
Perez-ruiz M [5]
Nguyen PQ [5]
Asif-laidin A [5]
Gil-cantero D [5]
Munier S [5]
Marabini R [5]
Masiulis S [5]
Fabrega-ferrer M [5]
Rivera-de-torre E [5]
Acker J [5]
Plaza-pegueroles A [5]
Coscolla M [5]
Lesage P [5]
Palacios-ortega J [5]
Capuzzi B [5]
Ginex T [5]
Ortin J [5]

Journal

Software

Microscope

Electron Source

Film or detector model

External links