Electron Microscopy Data Bank

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grant_funding_details:"Simons Foundation"

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Current Database

Current status

Sample type

Organism

Homo sapiens [62]
Mus musculus [45]
Escherichia coli [43]
Sus scrofa [32]
Rattus norvegicus [18]
Aureispira sp. ccb-qb1 [15]
(no species) [13]
Human immunodeficiency virus 1 [13]
Myxococcus xanthus [11]
Adeno-associated dependoparvovirus a [9]
Pepevirus rubrum [8]
Human respiratory syncytial virus [6]
Saccharomyces cerevisiae [5]
Influenza a virus [4]
Staphylococcus aureus [4]
Encephalitozoon intestinalis [4]
Lassa mammarenavirus [3]
Aureispira sp. [3]
Bacteriophage sp. [3]
Neisseria gonorrhoeae [3]
Macaca mulatta [3]
Ovis aries [3]
Oryctolagus cuniculus [3]
Escherichia phage ms2 [2]
Methanosarcina acetivorans [2]
Synthetic construct [2]
Drosophila melanogaster [2]
Porcine circovirus 2 [2]
Cavia porcellus [1]
Pseudomonas phage pp7 [1]
Tobacco mosaic virus [1]
Alphainfluenzavirus influenzae [1]
Pseudomonas phage phikz [1]
Escherichia phage ydc107_1 [1]
Escherichia phage ecszw-2 [1]
Neisseria gonorrhoeae [1]
Methylococcus capsulatus [1]
Severe acute respiratory syndrome coronavirus [1]
Acinetobacter phage mystique [1]
Flavobacterium johnsoniae [1]
Escherichia virus qbeta [1]
Stigmatella aurantiaca [1]
Influenza a virus [1]
Saccharomyces cerevisiae [1]
Yersinia pestis [1]
Pseudomonas aeruginosa [1]
Gallus gallus [1]
Camelus bactrianus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Carragher B [73]
Potter CS [73]
Tan YZ [60]
Kopylov M [51]
Lyumkis D [40]
Rice WJ [35]
Chua EYD [33]
Asenjo AB [31]
Benoit MPMH [31]
Sosa H [31]
Kwong PD [29]
Tan Y [28]
Bobe D [27]
Neselu K [26]
Finn MG [25]
Jenkins MC [25]
Wang B [25]
Wang D [24]
Zhang Z [23]
Baldwin PR [22]
Hernandez C [22]
Agbandje-mckenna M [21]
Aiyer S [21]
Barad BA [21]
Benner SA [21]
Bowman ME [21]
Dordevic-marquardt S [21]
Grotjahn DA [21]
Hoshika S [21]
Hull JA [21]
Louie G [21]
Mckenna R [21]
Mehrani A [21]
Mietzsch M [21]
Noel JAP [21]
Oh J [21]
Passos DO [21]
Shan Z [21]
Tan SM [21]
Yen LY [21]
Dhakal S [20]
Gorman J [20]
Kwok BH [20]
Newton TP [20]
Paydar M [20]
Davis JH [19]
Keshavarz-joud P [19]
Wei H [19]
Williamson JR [19]
Aktolun M [18]
Amendola D [18]
Bartlau N [18]
Clausen RP [18]
Eng ET [18]
Furusawa G [18]
Gangwar SP [18]
Kurnikova MG [18]
Lee KS [18]
Lien Y-W [18]
Lien YW [18]
Pilhofer M [18]
Polz MF [18]
Sobolevsky AI [18]
Stocker R [18]
Weiss GL [18]
Xu J [18]
Yelshanskaya MV [18]
Dandey VP [16]
Shapiro L [16]
Mascola JR [15]
Zhang B [15]
Zhou T [15]
Olia AS [14]
Bryksin AV [13]
Johnston JD [13]
De Marco A [13]
Koide A [12]
Koide S [12]
Noble AJ [12]
Owji AP [12]
Scapin G [12]
Alvarez Barkane Am [11]
Bhattacharya S [11]
Bourque AR [11]
Gennerich A [11]
Rao L [11]
Tsybovsky Y [11]
White K [11]
Acharya P [10]
Chen X [10]
Cheng A [10]
Chuang GY [10]
Doria-rose NA [10]
Kim LY [10]
Louder MK [10]
Ou L [10]
Wang S [10]
Ando N [9]
Bhatt N [9]
Brasch J [9]

Author by ORCID

Tan YZ [60]
Sosa H [31]
Benoit MPMH [31]
Chua EYD [31]
Asenjo AB [31]
Kwong PD [27]
Kopylov M [26]
Wang B [25]
Finn MG [24]
Carragher B [23]
Lyumkis D [22]
Grotjahn DA [21]
Aiyer S [21]
Hoshika S [21]
Barad BA [21]
Noel JAP [21]
Mckenna R [21]
Wang D [21]
Oh J [21]
Passos DO [21]
Shan Z [21]
Newton TP [20]
Kwok BH [20]
Williamson JR [19]
Davis JH [19]
Sobolevsky AI [18]
Lee KS [18]
Weiss GL [18]
Aktolun M [18]
Stocker R [18]
Pilhofer M [18]
Polz MF [18]
Bartlau N [18]
Kurnikova MG [18]
Eng ET [18]
Gangwar SP [18]
Xu J [18]
Lien YW [18]
Amendola D [18]
Gorman J [17]
Potter CS [17]
Bobe D [15]
De Marco A [11]
Noble AJ [11]
Rao L [11]
Gennerich A [11]
Johnston JD [11]
Acharya P [10]
Rice WJ [10]
Jeruzalmi D [9]
Ando N [9]
Lee D [9]
Miller RC [9]
Zhao L [9]
Zhou T [9]
Tang WJ [9]
Des Georges A [9]
Deprez-poulain R [8]
Yang T [8]
Zhang Y [8]
Kittredge A [8]
Wang J [8]
Sarfo EK [7]
Bylund T [7]
Gao Y [6]
Eisenstein F [6]
Cao D [6]
Liang B [6]
Gooneratne I [6]
Cheung J [5]
Lu W [5]
Harris DR [5]
Park SJ [5]
Coudray N [5]
Zimanyi CM [5]
Bhabha G [5]
Ye X [5]
Du J [5]
Karasawa A [5]
Koide S [4]
Kanekiyo M [4]
Chen Z [4]
Zhong ED [4]
Shapiro L [4]
Miller J [4]
Traaseth NJ [4]
Ekiert DC [4]
Sheng Z [4]
Pierson TC [4]
Parchment DK [4]
Iwasa JH [4]
Wang DN [4]
Torres VJ [4]
Riggi M [4]
Usmani M [4]
Koide A [4]
Raghu R [4]
Fu Z [3]
Guo Y [3]
Douek DC [3]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-71611

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Cryo-EM structure of the respiratory syncytial virus polymerase L:P in NTP-bound elongation state

CryoEM

Release date: May 6, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9pfr
Q-score: 0.519

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-71612

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Cryo-EM structure of the respiratory syncytial virus polymerase L:P in pre-reaction elongation state

CryoEM

Release date: May 6, 2026
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 9pfs
Q-score: 0.562

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-71613

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Cryo-EM structure of the respiratory syncytial virus polymerase L:P in pre-translocation elongation state

CryoEM

Release date: May 6, 2026
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 9pft
Q-score: 0.545

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-71614

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Cryo-EM structure of the respiratory syncytial virus polymerase L:P in post-translocation elongation state

CryoEM

Release date: May 6, 2026
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 9pfu
Q-score: 0.45

Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Mera C, Zhuang L, Slack J, Nudell-Cook E, Vy J, Berry J, Royal M, Shaik M, Youngs R, Liang B

Nat Commun (2026) [ Pubmed: 42049741 DOI: doi:10.1038/s41467-026-72519-0 ]

EMD-47957

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Cryo-EM model of E. coli aspartate transcarbamoylase in the T-state complexed with CP, CTP, UTP, and Mg2

CryoEM

Release date: April 15, 2026
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 9eel
Q-score: 0.363

Miller RC, Patterson MG, Bhatt N, Pei X, Ando N

Nat Commun (2026) [ Pubmed: 41862478 DOI: doi:10.1038/s41467-026-70909-y ]

EMD-47958

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Cryo-EM model of E. coli aspartate transcarbamoylase in the R-state complexed with CP, succinate, CTP, UTP, and Mg2

CryoEM

Release date: April 15, 2026
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9eem
Q-score: 0.421

Miller RC, Patterson MG, Bhatt N, Pei X, Ando N

Nat Commun (2026) [ Pubmed: 41862478 DOI: doi:10.1038/s41467-026-70909-y ]

EMD-47960

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Cryo-EM model of E. coli aspartate transcarbamoylase in the R-state complexed with CP, succinate, CTP, and Mg2

CryoEM

Release date: April 15, 2026
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 9eeo
Q-score: 0.318

Miller RC, Patterson MG, Bhatt N, Pei X, Ando N

Nat Commun (2026) [ Pubmed: 41862478 DOI: doi:10.1038/s41467-026-70909-y ]

EMD-47961

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Cryo-EM model of E. coli aspartate transcarbamoylase in the R-state complexed with CP and succinate

CryoEM

Release date: April 15, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9eep
Q-score: 0.415

Miller RC, Patterson MG, Bhatt N, Pei X, Ando N

Nat Commun (2026) [ Pubmed: 41862478 DOI: doi:10.1038/s41467-026-70909-y ]

EMD-47963

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3D View

Cryo-EM model of E. coli aspartate transcarbamoylase in the R-state complexed with CP, succinate, ATP, and Mg2

CryoEM

Release date: April 15, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9eeq
Q-score: 0.394

Miller RC, Patterson MG, Bhatt N, Pei X, Ando N

Nat Commun (2026) [ Pubmed: 41862478 DOI: doi:10.1038/s41467-026-70909-y ]

EMD-47964

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Cryo-EM model of E. coli aspartate transcarbamoylase in the R-state complexed with CP, succinate, ATP, GTP, and Mg2

CryoEM

Release date: April 15, 2026
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 9eer
Q-score: 0.416

Miller RC, Patterson MG, Bhatt N, Pei X, Ando N

Nat Commun (2026) [ Pubmed: 41862478 DOI: doi:10.1038/s41467-026-70909-y ]

Sort by: Download

Showing 1 - 10 of 287. Page 1 of 29

Display:

Statistics

Download

Select database:

EMDB [287]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [62]
Mus musculus [45]
Escherichia coli [43]
Sus scrofa [32]
Rattus norvegicus [18]
Aureispira sp. ccb-qb1 [15]
(no species) [13]
Human immunodeficiency virus 1 [13]
Myxococcus xanthus [11]
Adeno-associated dependoparvovirus a [9]
Pepevirus rubrum [8]
Human respiratory syncytial virus [6]
Saccharomyces cerevisiae [5]
Influenza a virus [4]
Staphylococcus aureus [4]
Encephalitozoon intestinalis [4]
Lassa mammarenavirus [3]
Aureispira sp. [3]
Bacteriophage sp. [3]
Neisseria gonorrhoeae [3]
Macaca mulatta [3]
Ovis aries [3]
Oryctolagus cuniculus [3]
Escherichia phage ms2 [2]
Methanosarcina acetivorans [2]
Synthetic construct [2]
Drosophila melanogaster [2]
Porcine circovirus 2 [2]
Cavia porcellus [1]
Pseudomonas phage pp7 [1]
Tobacco mosaic virus [1]
Alphainfluenzavirus influenzae [1]
Pseudomonas phage phikz [1]
Escherichia phage ydc107_1 [1]
Escherichia phage ecszw-2 [1]
Neisseria gonorrhoeae [1]
Methylococcus capsulatus [1]
Severe acute respiratory syndrome coronavirus [1]
Acinetobacter phage mystique [1]
Flavobacterium johnsoniae [1]
Escherichia virus qbeta [1]
Stigmatella aurantiaca [1]
Influenza a virus [1]
Saccharomyces cerevisiae [1]
Yersinia pestis [1]
Pseudomonas aeruginosa [1]
Gallus gallus [1]
Camelus bactrianus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Carragher B [73]
Potter CS [73]
Tan YZ [60]
Kopylov M [51]
Lyumkis D [40]
Rice WJ [35]
Chua EYD [33]
Asenjo AB [31]
Benoit MPMH [31]
Sosa H [31]
Kwong PD [29]
Tan Y [28]
Bobe D [27]
Neselu K [26]
Finn MG [25]
Jenkins MC [25]
Wang B [25]
Wang D [24]
Zhang Z [23]
Baldwin PR [22]
Hernandez C [22]
Agbandje-mckenna M [21]
Aiyer S [21]
Barad BA [21]
Benner SA [21]
Bowman ME [21]
Dordevic-marquardt S [21]
Grotjahn DA [21]
Hoshika S [21]
Hull JA [21]
Louie G [21]
Mckenna R [21]
Mehrani A [21]
Mietzsch M [21]
Noel JAP [21]
Oh J [21]
Passos DO [21]
Shan Z [21]
Tan SM [21]
Yen LY [21]
Dhakal S [20]
Gorman J [20]
Kwok BH [20]
Newton TP [20]
Paydar M [20]
Davis JH [19]
Keshavarz-joud P [19]
Wei H [19]
Williamson JR [19]
Aktolun M [18]
Amendola D [18]
Bartlau N [18]
Clausen RP [18]
Eng ET [18]
Furusawa G [18]
Gangwar SP [18]
Kurnikova MG [18]
Lee KS [18]
Lien Y-W [18]
Lien YW [18]
Pilhofer M [18]
Polz MF [18]
Sobolevsky AI [18]
Stocker R [18]
Weiss GL [18]
Xu J [18]
Yelshanskaya MV [18]
Dandey VP [16]
Shapiro L [16]
Mascola JR [15]
Zhang B [15]
Zhou T [15]
Olia AS [14]
Bryksin AV [13]
Johnston JD [13]
De Marco A [13]
Koide A [12]
Koide S [12]
Noble AJ [12]
Owji AP [12]
Scapin G [12]
Alvarez Barkane Am [11]
Bhattacharya S [11]
Bourque AR [11]
Gennerich A [11]
Rao L [11]
Tsybovsky Y [11]
White K [11]
Acharya P [10]
Chen X [10]
Cheng A [10]
Chuang GY [10]
Doria-rose NA [10]
Kim LY [10]
Louder MK [10]
Ou L [10]
Wang S [10]
Ando N [9]
Bhatt N [9]
Brasch J [9]

Author by ORCID

Tan YZ [60]
Sosa H [31]
Benoit MPMH [31]
Chua EYD [31]
Asenjo AB [31]
Kwong PD [27]
Kopylov M [26]
Wang B [25]
Finn MG [24]
Carragher B [23]
Lyumkis D [22]
Grotjahn DA [21]
Aiyer S [21]
Hoshika S [21]
Barad BA [21]
Noel JAP [21]
Mckenna R [21]
Wang D [21]
Oh J [21]
Passos DO [21]
Shan Z [21]
Newton TP [20]
Kwok BH [20]
Williamson JR [19]
Davis JH [19]
Sobolevsky AI [18]
Lee KS [18]
Weiss GL [18]
Aktolun M [18]
Stocker R [18]
Pilhofer M [18]
Polz MF [18]
Bartlau N [18]
Kurnikova MG [18]
Eng ET [18]
Gangwar SP [18]
Xu J [18]
Lien YW [18]
Amendola D [18]
Gorman J [17]
Potter CS [17]
Bobe D [15]
De Marco A [11]
Noble AJ [11]
Rao L [11]
Gennerich A [11]
Johnston JD [11]
Acharya P [10]
Rice WJ [10]
Jeruzalmi D [9]
Ando N [9]
Lee D [9]
Miller RC [9]
Zhao L [9]
Zhou T [9]
Tang WJ [9]
Des Georges A [9]
Deprez-poulain R [8]
Yang T [8]
Zhang Y [8]
Kittredge A [8]
Wang J [8]
Sarfo EK [7]
Bylund T [7]
Gao Y [6]
Eisenstein F [6]
Cao D [6]
Liang B [6]
Gooneratne I [6]
Cheung J [5]
Lu W [5]
Harris DR [5]
Park SJ [5]
Coudray N [5]
Zimanyi CM [5]
Bhabha G [5]
Ye X [5]
Du J [5]
Karasawa A [5]
Koide S [4]
Kanekiyo M [4]
Chen Z [4]
Zhong ED [4]
Shapiro L [4]
Miller J [4]
Traaseth NJ [4]
Ekiert DC [4]
Sheng Z [4]
Pierson TC [4]
Parchment DK [4]
Iwasa JH [4]
Wang DN [4]
Torres VJ [4]
Riggi M [4]
Usmani M [4]
Koide A [4]
Raghu R [4]
Fu Z [3]
Guo Y [3]
Douek DC [3]

Journal

Software

Microscope

Electron Source

Film or detector model

External links