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Current Database

  • EMDB [1744]

Current status

  • REL [1744]

Sample type

  • Complex [1569]
  • Protein [1307]
  • Ligand [846]
  • DNA [233]
  • RNA [185]
  • Cellular component [66]
  • Virus [53]
  • Cell [50]
  • Tissue [10]
  • Other [6]

Organism

  • Homo sapiens [943]
  • Mus musculus [149]
  • Synthetic construct [145]
  • Geobacillus stearothermophilus [101]
  • Rattus norvegicus [94]
  • Saccharomyces cerevisiae [88]
  • Xenopus laevis [63]
  • Escherichia coli [50]
  • Saccharomyces cerevisiae [31]
  • Lama glama [30]
  • Saccharomyces cerevisiae [29]
  • Severe acute respiratory syndrome coronavirus [26]
  • Bos taurus [26]
  • Human herpesvirus 8 [20]
  • Flavobacterium johnsoniae [15]
  • Aequorea victoria [14]
  • Oryctolagus cuniculus [14]
  • Epstein-barr virus (strain gd1) [12]
  • Danio rerio [12]
  • Escherichia coli [12]
  • Gallus gallus [11]
  • Rotavirus a [10]
  • Mycolicibacterium smegmatis [9]
  • Drosophila melanogaster [9]
  • Flavobacterium johnsoniae [9]
  • Helicobacter pylori [8]
  • Pseudomonas virus e217 [7]
  • Arabidopsis thaliana [7]
  • Escherichia coli [7]
  • Spodoptera exigua [7]
  • Salmonella enterica [7]
  • Mus musculus polyomavirus 1 [6]
  • Human immunodeficiency virus 1 [6]
  • Mycobacterium tuberculosis [6]
  • Cryptococcus neoformans [6]
  • Canavalia ensiformis [6]
  • Legionella pneumophila [6]
  • Helicobacter pylori [6]
  • Human cytomegalovirus [5]
  • Caldanaerobacter subterraneus [5]
  • Thermoflavifilum thermophilum [5]
  • Pseudomonas virus pap3 [5]
  • Methanosarcina mazei [5]
  • Staphylococcus virus 80alpha [5]
  • Streptococcus pyogenes [4]
  • Bacterium [4]
  • Mus musculus polyomavirus 1 [4]
  • Adeno-associated dependoparvovirus a [4]
  • Pbunavirus pa193 [4]
  • Nitratifractor salsuginis [4]
  • Pseudomonas aeruginosa [4]
  • Cryptococcus neoformans [4]
  • Caenorhabditis elegans [4]
  • Trichoplusia ni [4]
  • Xenopus tropicalis [4]
  • Escherichia coli [4]
  • Human herpesvirus 8 [4]
  • Streptococcus sanguinis [3]
  • Enterococcus faecium [3]
  • Bacillus anthracis [3]
  • Pseudomonas aeruginosa [3]
  • Saccharolobus solfataricus [3]
  • Escherichia phage ecszw-2 [3]
  • Salmonella phage p22 [3]
  • Ictidomys tridecemlineatus [3]
  • Plasmodium falciparum [3]
  • Shewanella sp. (strain ana-3) [3]
  • Epstein-barr virus (strain gd1) [2]
  • Dengue virus [2]
  • Mammalian orthorubulavirus 5 [2]
  • Human respiratory syncytial virus [2]
  • Human immunodeficiency virus 1 [2]
  • Escherichia phage ms2 [2]
  • (no species) [2]
  • Hepatovirus a [2]
  • Methylococcus capsulatus [2]
  • Escherichia phage lambda [2]
  • Dna molecule [2]
  • Chlamydomonas reinhardtii [2]
  • Bacteriophage sp. [2]
  • (no species) [2]
  • Methylococcus capsulatus [2]
  • Escherichia coli [2]
  • Schizosaccharomyces pombe [2]
  • Escherichia coli [2]
  • Candida albicans [2]
  • Klebsiella pneumoniae [2]
  • Human immunodeficiency virus 1 [2]
  • Tribolium castaneum [2]
  • Phage #d [2]
  • (no species) [2]
  • Pan troglodytes [2]
  • Sus scrofa [2]
  • Cereibacter sphaeroides [1]
  • Cronobacter phage es2 [1]
  • Human immunodeficiency virus 1 [1]
  • Human immunodeficiency virus 1 [1]
  • Human immunodeficiency virus 2 [1]
  • Simian immunodeficiency virus [1]
  • Enterovirus b [1]

EM Method

  • Single-particle [1660]
  • Tomography [51]
  • Helical reconstruction [31]
  • Subtomogram averaging [2]

Resolution

  • < 2Å [12]
  • ≥ 2Å and < 3Å [403]
  • ≥ 3Å and < 4Å [934]
  • ≥ 4Å and < 5Å [181]
  • ≥ 5Å and < 6Å [40]
  • ≥ 6Å and < 8Å [69]
  • ≥ 8Å and < 12Å [38]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [7]
  • ≥ 20Å and < 30Å [12]
  • ≥ 30Å [3]

Model molecular weight

  • 0-50 kDa [15]
  • 50-100 kDa [62]
  • 100-250 kDa [466]
  • 250-500 kDa [329]
  • 500-1000 kDa [125]
  • 1-2 MDa [48]
  • 2-5 MDa [41]
  • 5-10 MDa [6]
  • > 10 MDa [5]

Release Date

  • 2026 [436]
  • 2025 [324]
  • 2024 [306]
  • 2023 [215]
  • 2022 [177]
  • 2021 [122]
  • 2020 [79]
  • 2019 [47]
  • 2018 [9]
  • 2017 [23]
  • 2016 [6]

Author by name

  • Sobolevsky AI [169]
  • Yelshanskaya MV [98]
  • Hite RK [96]
  • Degenhardt MFS [82]
  • Nadezhdin KD [77]
  • Stagno J [77]
  • Wang YX [77]
  • Lea SM [76]
  • Deme JC [73]
  • Gangwar SP [70]
  • Yen LY [68]
  • Newton TP [61]
  • Neuberger A [55]
  • Fischer ES [52]
  • Mohammed BM [50]
  • Kurnikova MG [49]
  • Wang Y-X [49]
  • Bai Y [48]
  • Chen X [47]
  • Li H [45]
  • Paknejad N [44]
  • Hunkeler M [43]
  • Liu S [39]
  • Liu M [38]
  • Liu X [37]
  • Remus D [37]
  • Zhou BR [37]
  • Zhou XE [37]
  • Jones PA [36]
  • Walters KJ [36]
  • Wang F [35]
  • Zhang J [35]
  • He Y [34]
  • Worden EJ [34]
  • Aktolun M [33]
  • Sapuru V [33]
  • Devbhandari S [32]
  • Kumar C [32]
  • Stagno JR [32]
  • Yang R [30]
  • Ohi MD [28]
  • Wang W [28]
  • Zhang P [28]
  • Lee Y-T [27]
  • Xie X [27]
  • Chua GNL [26]
  • Dykstra ML [26]
  • Pavletich NP [26]
  • Talyzina IA [26]
  • Tesmer JJG [26]
  • Cheng Y [25]
  • Li B [25]
  • Tarasov SG [25]
  • Berks BC [24]
  • Bhoge BA [24]
  • Botuyan MV [24]
  • Cui G [24]
  • Hite R [24]
  • Hu Q [24]
  • Jin CY [24]
  • Mer G [24]
  • Skeparnias I [24]
  • Xia D [24]
  • Yaseen A [24]
  • Zhao D [24]
  • Chen S [23]
  • Ali I [22]
  • Allwein B [22]
  • Ananda VY [22]
  • Bahng S [22]
  • Batra S [22]
  • Bruning JG [22]
  • Chan DC [22]
  • Chao LH [22]
  • Frazao De Souza Degenhardt M [22]
  • Fry MY [22]
  • Ge Y [22]
  • Ha LL [22]
  • Hakim P [22]
  • Huang RK [22]
  • Inde Z [22]
  • Kleinstiver BP [22]
  • Landoni JC [22]
  • Lee CM [22]
  • Lee YT [22]
  • Luce BE [22]
  • Lugo CM [22]
  • Marians KJ [22]
  • Mcdonald JL [22]
  • Navarro PP [22]
  • Patel DJ [22]
  • Qin X [22]
  • Rath S [22]
  • Sarosiek KA [22]
  • Schrecker M [22]
  • Verba KA [22]
  • Wang X [22]
  • Xu B [22]
  • Bhandari J [21]
  • James LI [21]

Author by ORCID

  • Sobolevsky AI [117]
  • Hite RK [90]
  • Degenhardt MFS [79]
  • Stagno J [76]
  • Wang YX [73]
  • Nadezhdin KD [57]
  • Gangwar SP [55]
  • Neuberger A [53]
  • Kurnikova MG [48]
  • Newton TP [46]
  • Paknejad N [41]
  • Fischer ES [37]
  • Remus D [37]
  • Lea SM [35]
  • Sapuru V [33]
  • Li H [32]
  • He Y [32]
  • Hunkeler M [32]
  • Wang Y-X [31]
  • Deme JC [29]
  • Aktolun M [28]
  • Stagno JR [25]
  • Tesmer JJG [25]
  • Mer G [24]
  • Zhang J [24]
  • Botuyan MV [24]
  • Inde Z [22]
  • Ge Y [22]
  • Chan DC [22]
  • Landoni JC [22]
  • Verba KA [22]
  • Xia D [22]
  • Mcdonald JL [22]
  • Sarosiek KA [22]
  • Chao LH [22]
  • Allwein B [22]
  • Hakim P [22]
  • Ali I [22]
  • Bruning JG [22]
  • Qin X [22]
  • Batra S [22]
  • Ha LL [22]
  • Lugo CM [22]
  • Lee CM [22]
  • Cheng Y [21]
  • Bhandari J [21]
  • Frazao De Souza Degenhardt M [21]
  • Mohammed BM [20]
  • Walters KJ [20]
  • Zhan J [20]
  • Bai XC [20]
  • Zhang P [19]
  • Hurley JH [18]
  • Clausen RP [18]
  • Schrecker M [17]
  • Schafer CT [17]
  • Handel TM [17]
  • Gustavsson M [17]
  • Xu B [17]
  • James LI [17]
  • Li F [16]
  • Roy Burman Ss [16]
  • Yi M [16]
  • Zhou BR [16]
  • Chubanov V [16]
  • Ohi MD [16]
  • Emanuele MJ [16]
  • Liu T [15]
  • Amann SJ [15]
  • Haselbach D [15]
  • Brown NG [15]
  • Donovan KA [15]
  • Abini-agbomson S [15]
  • Grishkovskaya I [15]
  • Miao Y [15]
  • Funk AV [15]
  • Collins JL [15]
  • Mukherjee S [14]
  • Lee YT [14]
  • Shi Y [14]
  • Rawson S [14]
  • Fromme JC [14]
  • Chen S [14]
  • Gray NS [13]
  • Basore K [13]
  • Chen X [13]
  • Wang W [13]
  • Twomey EC [13]
  • Moresco EMY [13]
  • Tomkinson AE [13]
  • Samso M [13]
  • Beutler B [13]
  • Dai X [13]
  • Lyon S [13]
  • Xiang Y [13]
  • Di Cera E [13]
  • Choi JH [13]
  • Yue H [13]
  • Duan HD [12]
  • Lees-miller SP [12]

Journal

  • NAT COMMUN [323]
  • TO BE PUBLISHED [228]
  • MOL CELL [156]
  • NATURE [142]
  • NAT STRUCT MOL BIOL [141]
  • BIORXIV [96]
  • PNAS [76]
  • ELIFE [75]
  • SCIENCE [65]
  • SCI ADV [54]
  • CELL [49]
  • J.THROMB.HAEMOST. [37]
  • NUCLEIC ACIDS RES [36]
  • CELL REP [30]
  • EMBO J [26]
  • J MOL BIOL [26]
  • STRUCTURE [25]
  • ACTA CRYSTALLOGR D STRUCT BIOL [21]
  • NAT CHEM BIOL [17]
  • COMMUN BIOL [16]
  • J AM CHEM SOC [14]
  • J BIOL CHEM [14]
  • NAT METHODS [14]
  • NAT MICROBIOL [14]
  • BLOOD [13]
  • CELL REP MED [10]
  • PLOS PATHOG [10]
  • ISCIENCE [7]
  • RES SQ [6]
  • CELL DISCOV [5]
  • CHEMISTRY [5]
  • COMMUN CHEM [5]
  • FRONT MOL BIOSCI [5]
  • ACS NANO [4]
  • ADV SCI [4]
  • J STRUCT BIOL [4]
  • LIFE SCI ALLIANCE [4]
  • NEURON [4]
  • ADV MATER [3]
  • IMMUNITY [3]
  • J VIROL [3]
  • MOL THER METHODS CLIN DEV [3]
  • NAT NANOTECHNOL [3]
  • SIGNAL TRANSDUCT TARGET THER [3]
  • ANGEW CHEM INT ED ENGL [2]
  • BIOCHEMISTRY [2]
  • CHEM [2]
  • EMBO REP [2]
  • NAR MOL MED [2]
  • RSC CHEM BIOL [2]
  • ANAL CHEM [1]
  • BIOMED PHARMACOTHER [1]
  • BIOMOLECULES [1]
  • CANCER RES. [1]
  • CELL CHEM BIOL [1]
  • CELL HOST MICROBE [1]
  • CHEMRXIV [1]
  • FRONT MOL NEUROSCI [1]
  • IUCRJ [1]
  • J CELL BIOL [1]
  • NAT CELL BIOL [1]
  • NOT PUBLISHED [1]
  • PLOS ONE [1]
  • SCI REP [1]
  • VIRUSES [1]

Software

  • CRYOSPARC [804]
  • RELION [294]
  • CTFFIND [65]
  • IMOD [39]
  • COOT [22]
  • UCSF CHIMERAX [21]
  • GCTF [17]
  • CISTEM [13]
  • SIMPLE [10]
  • EMAN [7]
  • ETOMO [6]
  • FREALIGN [6]
  • EMREADY [5]
  • MOTIONCORR2 [5]
  • UCSF CHIMERA [5]
  • WARP [5]
  • SPIDER [4]
  • PHENIX [2]
  • SPHIRE [2]
  • APPION HELIX BOXER [1]
  • AUTO3DEM [1]
  • CRYOLO [1]
  • CTFFIND3 [1]
  • CTFIT [1]
  • FREALIX [1]
  • IMIRS [1]
  • JSPR [1]

Microscope

  • FEI TITAN KRIOS [768]
  • TFS KRIOS [672]
  • FEI TALOS ARCTICA [130]
  • TFS GLACIOS [57]
  • FEI POLARA 300 [18]
  • TFS TALOS L120C [14]
  • TFS TALOS [13]
  • FEI TITAN [12]
  • JEOL CRYO ARM 300 [9]
  • JEOL 3200FS [8]
  • FEI TECNAI 20 [6]
  • JEOL 2200FS [6]
  • JEOL CRYO ARM 200 [6]
  • FEI TECNAI ARCTICA [5]
  • JEOL 2100 [5]
  • FEI TECNAI 12 [4]
  • FEI TECNAI F30 [4]
  • FEI/PHILIPS CM10 [2]
  • JEOL 2100F [2]
  • FEI TECNAI F20 [1]
  • FEI TECNAI SPIRIT [1]
  • JEOL 2010F [1]
  • TFS TALOS F200C [1]
  • TFS TITAN THEMIS [1]

Electron Source

  • FIELD EMISSION GUN [1696]
  • OTHER [26]
  • LAB6 [22]

Film or detector model

  • GATAN K3 6K X 4K [741]
  • GATAN K3 BIOQUANTUM 6K X 4K [419]
  • FEI FALCON IV 4K X 4K [237]
  • GATAN K2 SUMMIT 4K X 4K [224]
  • TFS FALCON 4I 4K X 4K [42]
  • FEI CETA 4K X 4K [16]
  • GATAN K2 QUANTUM 4K X 4K [15]
  • FEI FALCON III 4K X 4K [11]
  • GATAN K3 BIOCONTINUUM 6K X 4K [11]
  • DIRECT ELECTRON DE-20 5K X 3K [7]
  • GATAN ULTRASCAN 1000 2K X 2K [6]
  • FEI EAGLE 2K X 2K [5]
  • FEI FALCON I 4K X 4K [4]
  • OTHER [4]
  • FEI EAGLE 4K X 4K [1]
  • GATAN K2 BASE 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • TVIPS TEMCAM-F415 4K X 4K [1]

External links

  • PDB [1543]
  • UniProt [1115]
  • PDBe-Kb [1023]
  • AlphaFold DB [1017]
  • Gene Ontology [873]
  • InterPro [862]
  • Pfam [828]
  • ChEBI [688]
  • DrugBank [623]
  • ChEMBL [573]
  • Complex Portal [444]
  • EMPIAR [169]
  • SCOP2 [11]
  • CATH [8]
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Showing 1 - 10 of 1744. Page 1 of 175
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EMD-74584
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 9zqy
Q-score: 0.443
Similar entry percentile: 30%

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74756
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 9ztk
Q-score: 0.28
Similar entry percentile: 10%

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74802
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 9zub
Q-score: 0.352
Similar entry percentile: 24%

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74822
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 9zun
Q-score: 0.264
Similar entry percentile: 6%

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74856
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.5 Å
EM Method: Single-particle

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74858
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.6 Å
EM Method: Single-particle

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74860
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.4 Å
EM Method: Single-particle

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74882
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
Focused map
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9zvn

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74883
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
Focused map
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.4 Å
EM Method: Single-particle

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

EMD-74884
Download Map
3D View
Structural insights into the exosite-mediated activation of Factor IX by Factor XIa using cryoEM
Consensus map
CryoEM
Release date: Sept. 9, 2026
Resolution: 3.4 Å
EM Method: Single-particle

Mohammed BM, Deavila S, Friet T, Dattilio I

J.Thromb.Haemost. (2026) [ Pubmed: 42628751 DOI: doi:10.1016/j.jtha.2026.08.015 ]

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Filter By

Current Database

  • EMDB [1744]

Current status

  • REL [1744]

Sample type

  • Complex [1569]
  • Protein [1307]
  • Ligand [846]
  • DNA [233]
  • RNA [185]
  • Cellular component [66]
  • Virus [53]
  • Cell [50]
  • Tissue [10]
  • Other [6]

Organism

  • Homo sapiens [943]
  • Mus musculus [149]
  • Synthetic construct [145]
  • Geobacillus stearothermophilus [101]
  • Rattus norvegicus [94]
  • Saccharomyces cerevisiae [88]
  • Xenopus laevis [63]
  • Escherichia coli [50]
  • Saccharomyces cerevisiae [31]
  • Lama glama [30]
  • Saccharomyces cerevisiae [29]
  • Severe acute respiratory syndrome coronavirus [26]
  • Bos taurus [26]
  • Human herpesvirus 8 [20]
  • Flavobacterium johnsoniae [15]
  • Aequorea victoria [14]
  • Oryctolagus cuniculus [14]
  • Epstein-barr virus (strain gd1) [12]
  • Danio rerio [12]
  • Escherichia coli [12]
  • Gallus gallus [11]
  • Rotavirus a [10]
  • Mycolicibacterium smegmatis [9]
  • Drosophila melanogaster [9]
  • Flavobacterium johnsoniae [9]
  • Helicobacter pylori [8]
  • Pseudomonas virus e217 [7]
  • Arabidopsis thaliana [7]
  • Escherichia coli [7]
  • Spodoptera exigua [7]
  • Salmonella enterica [7]
  • Mus musculus polyomavirus 1 [6]
  • Human immunodeficiency virus 1 [6]
  • Mycobacterium tuberculosis [6]
  • Cryptococcus neoformans [6]
  • Canavalia ensiformis [6]
  • Legionella pneumophila [6]
  • Helicobacter pylori [6]
  • Human cytomegalovirus [5]
  • Caldanaerobacter subterraneus [5]
  • Thermoflavifilum thermophilum [5]
  • Pseudomonas virus pap3 [5]
  • Methanosarcina mazei [5]
  • Staphylococcus virus 80alpha [5]
  • Streptococcus pyogenes [4]
  • Bacterium [4]
  • Mus musculus polyomavirus 1 [4]
  • Adeno-associated dependoparvovirus a [4]
  • Pbunavirus pa193 [4]
  • Nitratifractor salsuginis [4]
  • Pseudomonas aeruginosa [4]
  • Cryptococcus neoformans [4]
  • Caenorhabditis elegans [4]
  • Trichoplusia ni [4]
  • Xenopus tropicalis [4]
  • Escherichia coli [4]
  • Human herpesvirus 8 [4]
  • Streptococcus sanguinis [3]
  • Enterococcus faecium [3]
  • Bacillus anthracis [3]
  • Pseudomonas aeruginosa [3]
  • Saccharolobus solfataricus [3]
  • Escherichia phage ecszw-2 [3]
  • Salmonella phage p22 [3]
  • Ictidomys tridecemlineatus [3]
  • Plasmodium falciparum [3]
  • Shewanella sp. (strain ana-3) [3]
  • Epstein-barr virus (strain gd1) [2]
  • Dengue virus [2]
  • Mammalian orthorubulavirus 5 [2]
  • Human respiratory syncytial virus [2]
  • Human immunodeficiency virus 1 [2]
  • Escherichia phage ms2 [2]
  • (no species) [2]
  • Hepatovirus a [2]
  • Methylococcus capsulatus [2]
  • Escherichia phage lambda [2]
  • Dna molecule [2]
  • Chlamydomonas reinhardtii [2]
  • Bacteriophage sp. [2]
  • (no species) [2]
  • Methylococcus capsulatus [2]
  • Escherichia coli [2]
  • Schizosaccharomyces pombe [2]
  • Escherichia coli [2]
  • Candida albicans [2]
  • Klebsiella pneumoniae [2]
  • Human immunodeficiency virus 1 [2]
  • Tribolium castaneum [2]
  • Phage #d [2]
  • (no species) [2]
  • Pan troglodytes [2]
  • Sus scrofa [2]
  • Cereibacter sphaeroides [1]
  • Cronobacter phage es2 [1]
  • Human immunodeficiency virus 1 [1]
  • Human immunodeficiency virus 1 [1]
  • Human immunodeficiency virus 2 [1]
  • Simian immunodeficiency virus [1]
  • Enterovirus b [1]

EM Method

  • Single-particle [1660]
  • Tomography [51]
  • Helical reconstruction [31]
  • Subtomogram averaging [2]

Resolution

  • < 2Å [12]
  • ≥ 2Å and < 3Å [403]
  • ≥ 3Å and < 4Å [934]
  • ≥ 4Å and < 5Å [181]
  • ≥ 5Å and < 6Å [40]
  • ≥ 6Å and < 8Å [69]
  • ≥ 8Å and < 12Å [38]
  • ≥ 12Å and < 16Å [6]
  • ≥ 16Å and < 20Å [7]
  • ≥ 20Å and < 30Å [12]
  • ≥ 30Å [3]

Model molecular weight

  • 0-50 kDa [15]
  • 50-100 kDa [62]
  • 100-250 kDa [466]
  • 250-500 kDa [329]
  • 500-1000 kDa [125]
  • 1-2 MDa [48]
  • 2-5 MDa [41]
  • 5-10 MDa [6]
  • > 10 MDa [5]

Release Date

  • 2026 [436]
  • 2025 [324]
  • 2024 [306]
  • 2023 [215]
  • 2022 [177]
  • 2021 [122]
  • 2020 [79]
  • 2019 [47]
  • 2018 [9]
  • 2017 [23]
  • 2016 [6]

Author by name

  • Sobolevsky AI [169]
  • Yelshanskaya MV [98]
  • Hite RK [96]
  • Degenhardt MFS [82]
  • Nadezhdin KD [77]
  • Stagno J [77]
  • Wang YX [77]
  • Lea SM [76]
  • Deme JC [73]
  • Gangwar SP [70]
  • Yen LY [68]
  • Newton TP [61]
  • Neuberger A [55]
  • Fischer ES [52]
  • Mohammed BM [50]
  • Kurnikova MG [49]
  • Wang Y-X [49]
  • Bai Y [48]
  • Chen X [47]
  • Li H [45]
  • Paknejad N [44]
  • Hunkeler M [43]
  • Liu S [39]
  • Liu M [38]
  • Liu X [37]
  • Remus D [37]
  • Zhou BR [37]
  • Zhou XE [37]
  • Jones PA [36]
  • Walters KJ [36]
  • Wang F [35]
  • Zhang J [35]
  • He Y [34]
  • Worden EJ [34]
  • Aktolun M [33]
  • Sapuru V [33]
  • Devbhandari S [32]
  • Kumar C [32]
  • Stagno JR [32]
  • Yang R [30]
  • Ohi MD [28]
  • Wang W [28]
  • Zhang P [28]
  • Lee Y-T [27]
  • Xie X [27]
  • Chua GNL [26]
  • Dykstra ML [26]
  • Pavletich NP [26]
  • Talyzina IA [26]
  • Tesmer JJG [26]
  • Cheng Y [25]
  • Li B [25]
  • Tarasov SG [25]
  • Berks BC [24]
  • Bhoge BA [24]
  • Botuyan MV [24]
  • Cui G [24]
  • Hite R [24]
  • Hu Q [24]
  • Jin CY [24]
  • Mer G [24]
  • Skeparnias I [24]
  • Xia D [24]
  • Yaseen A [24]
  • Zhao D [24]
  • Chen S [23]
  • Ali I [22]
  • Allwein B [22]
  • Ananda VY [22]
  • Bahng S [22]
  • Batra S [22]
  • Bruning JG [22]
  • Chan DC [22]
  • Chao LH [22]
  • Frazao De Souza Degenhardt M [22]
  • Fry MY [22]
  • Ge Y [22]
  • Ha LL [22]
  • Hakim P [22]
  • Huang RK [22]
  • Inde Z [22]
  • Kleinstiver BP [22]
  • Landoni JC [22]
  • Lee CM [22]
  • Lee YT [22]
  • Luce BE [22]
  • Lugo CM [22]
  • Marians KJ [22]
  • Mcdonald JL [22]
  • Navarro PP [22]
  • Patel DJ [22]
  • Qin X [22]
  • Rath S [22]
  • Sarosiek KA [22]
  • Schrecker M [22]
  • Verba KA [22]
  • Wang X [22]
  • Xu B [22]
  • Bhandari J [21]
  • James LI [21]

Author by ORCID

  • Sobolevsky AI [117]
  • Hite RK [90]
  • Degenhardt MFS [79]
  • Stagno J [76]
  • Wang YX [73]
  • Nadezhdin KD [57]
  • Gangwar SP [55]
  • Neuberger A [53]
  • Kurnikova MG [48]
  • Newton TP [46]
  • Paknejad N [41]
  • Fischer ES [37]
  • Remus D [37]
  • Lea SM [35]
  • Sapuru V [33]
  • Li H [32]
  • He Y [32]
  • Hunkeler M [32]
  • Wang Y-X [31]
  • Deme JC [29]
  • Aktolun M [28]
  • Stagno JR [25]
  • Tesmer JJG [25]
  • Mer G [24]
  • Zhang J [24]
  • Botuyan MV [24]
  • Inde Z [22]
  • Ge Y [22]
  • Chan DC [22]
  • Landoni JC [22]
  • Verba KA [22]
  • Xia D [22]
  • Mcdonald JL [22]
  • Sarosiek KA [22]
  • Chao LH [22]
  • Allwein B [22]
  • Hakim P [22]
  • Ali I [22]
  • Bruning JG [22]
  • Qin X [22]
  • Batra S [22]
  • Ha LL [22]
  • Lugo CM [22]
  • Lee CM [22]
  • Cheng Y [21]
  • Bhandari J [21]
  • Frazao De Souza Degenhardt M [21]
  • Mohammed BM [20]
  • Walters KJ [20]
  • Zhan J [20]
  • Bai XC [20]
  • Zhang P [19]
  • Hurley JH [18]
  • Clausen RP [18]
  • Schrecker M [17]
  • Schafer CT [17]
  • Handel TM [17]
  • Gustavsson M [17]
  • Xu B [17]
  • James LI [17]
  • Li F [16]
  • Roy Burman Ss [16]
  • Yi M [16]
  • Zhou BR [16]
  • Chubanov V [16]
  • Ohi MD [16]
  • Emanuele MJ [16]
  • Liu T [15]
  • Amann SJ [15]
  • Haselbach D [15]
  • Brown NG [15]
  • Donovan KA [15]
  • Abini-agbomson S [15]
  • Grishkovskaya I [15]
  • Miao Y [15]
  • Funk AV [15]
  • Collins JL [15]
  • Mukherjee S [14]
  • Lee YT [14]
  • Shi Y [14]
  • Rawson S [14]
  • Fromme JC [14]
  • Chen S [14]
  • Gray NS [13]
  • Basore K [13]
  • Chen X [13]
  • Wang W [13]
  • Twomey EC [13]
  • Moresco EMY [13]
  • Tomkinson AE [13]
  • Samso M [13]
  • Beutler B [13]
  • Dai X [13]
  • Lyon S [13]
  • Xiang Y [13]
  • Di Cera E [13]
  • Choi JH [13]
  • Yue H [13]
  • Duan HD [12]
  • Lees-miller SP [12]

Journal

  • NAT COMMUN [323]
  • TO BE PUBLISHED [228]
  • MOL CELL [156]
  • NATURE [142]
  • NAT STRUCT MOL BIOL [141]
  • BIORXIV [96]
  • PNAS [76]
  • ELIFE [75]
  • SCIENCE [65]
  • SCI ADV [54]
  • CELL [49]
  • J.THROMB.HAEMOST. [37]
  • NUCLEIC ACIDS RES [36]
  • CELL REP [30]
  • EMBO J [26]
  • J MOL BIOL [26]
  • STRUCTURE [25]
  • ACTA CRYSTALLOGR D STRUCT BIOL [21]
  • NAT CHEM BIOL [17]
  • COMMUN BIOL [16]
  • J AM CHEM SOC [14]
  • J BIOL CHEM [14]
  • NAT METHODS [14]
  • NAT MICROBIOL [14]
  • BLOOD [13]
  • CELL REP MED [10]
  • PLOS PATHOG [10]
  • ISCIENCE [7]
  • RES SQ [6]
  • CELL DISCOV [5]
  • CHEMISTRY [5]
  • COMMUN CHEM [5]
  • FRONT MOL BIOSCI [5]
  • ACS NANO [4]
  • ADV SCI [4]
  • J STRUCT BIOL [4]
  • LIFE SCI ALLIANCE [4]
  • NEURON [4]
  • ADV MATER [3]
  • IMMUNITY [3]
  • J VIROL [3]
  • MOL THER METHODS CLIN DEV [3]
  • NAT NANOTECHNOL [3]
  • SIGNAL TRANSDUCT TARGET THER [3]
  • ANGEW CHEM INT ED ENGL [2]
  • BIOCHEMISTRY [2]
  • CHEM [2]
  • EMBO REP [2]
  • NAR MOL MED [2]
  • RSC CHEM BIOL [2]
  • ANAL CHEM [1]
  • BIOMED PHARMACOTHER [1]
  • BIOMOLECULES [1]
  • CANCER RES. [1]
  • CELL CHEM BIOL [1]
  • CELL HOST MICROBE [1]
  • CHEMRXIV [1]
  • FRONT MOL NEUROSCI [1]
  • IUCRJ [1]
  • J CELL BIOL [1]
  • NAT CELL BIOL [1]
  • NOT PUBLISHED [1]
  • PLOS ONE [1]
  • SCI REP [1]
  • VIRUSES [1]

Software

  • CRYOSPARC [804]
  • RELION [294]
  • CTFFIND [65]
  • IMOD [39]
  • COOT [22]
  • UCSF CHIMERAX [21]
  • GCTF [17]
  • CISTEM [13]
  • SIMPLE [10]
  • EMAN [7]
  • ETOMO [6]
  • FREALIGN [6]
  • EMREADY [5]
  • MOTIONCORR2 [5]
  • UCSF CHIMERA [5]
  • WARP [5]
  • SPIDER [4]
  • PHENIX [2]
  • SPHIRE [2]
  • APPION HELIX BOXER [1]
  • AUTO3DEM [1]
  • CRYOLO [1]
  • CTFFIND3 [1]
  • CTFIT [1]
  • FREALIX [1]
  • IMIRS [1]
  • JSPR [1]

Microscope

  • FEI TITAN KRIOS [768]
  • TFS KRIOS [672]
  • FEI TALOS ARCTICA [130]
  • TFS GLACIOS [57]
  • FEI POLARA 300 [18]
  • TFS TALOS L120C [14]
  • TFS TALOS [13]
  • FEI TITAN [12]
  • JEOL CRYO ARM 300 [9]
  • JEOL 3200FS [8]
  • FEI TECNAI 20 [6]
  • JEOL 2200FS [6]
  • JEOL CRYO ARM 200 [6]
  • FEI TECNAI ARCTICA [5]
  • JEOL 2100 [5]
  • FEI TECNAI 12 [4]
  • FEI TECNAI F30 [4]
  • FEI/PHILIPS CM10 [2]
  • JEOL 2100F [2]
  • FEI TECNAI F20 [1]
  • FEI TECNAI SPIRIT [1]
  • JEOL 2010F [1]
  • TFS TALOS F200C [1]
  • TFS TITAN THEMIS [1]

Electron Source

  • FIELD EMISSION GUN [1696]
  • OTHER [26]
  • LAB6 [22]

Film or detector model

  • GATAN K3 6K X 4K [741]
  • GATAN K3 BIOQUANTUM 6K X 4K [419]
  • FEI FALCON IV 4K X 4K [237]
  • GATAN K2 SUMMIT 4K X 4K [224]
  • TFS FALCON 4I 4K X 4K [42]
  • FEI CETA 4K X 4K [16]
  • GATAN K2 QUANTUM 4K X 4K [15]
  • FEI FALCON III 4K X 4K [11]
  • GATAN K3 BIOCONTINUUM 6K X 4K [11]
  • DIRECT ELECTRON DE-20 5K X 3K [7]
  • GATAN ULTRASCAN 1000 2K X 2K [6]
  • FEI EAGLE 2K X 2K [5]
  • FEI FALCON I 4K X 4K [4]
  • OTHER [4]
  • FEI EAGLE 4K X 4K [1]
  • GATAN K2 BASE 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]
  • TVIPS TEMCAM-F415 4K X 4K [1]

External links

  • PDB [1543]
  • UniProt [1115]
  • PDBe-Kb [1023]
  • AlphaFold DB [1017]
  • Gene Ontology [873]
  • InterPro [862]
  • Pfam [828]
  • ChEBI [688]
  • DrugBank [623]
  • ChEMBL [573]
  • Complex Portal [444]
  • EMPIAR [169]
  • SCOP2 [11]
  • CATH [8]