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grant_funding_details:"Marsden Fund"

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Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Protein [12]
  • Ligand [6]
  • DNA [2]

Organism

  • Synthetic construct [4]
  • Helicobacter pylori [3]
  • Mycobacterium tuberculosis [3]
  • Photobacterium profundum [2]
  • Escherichia coli [2]
  • Haemophilus influenzae [2]
  • Photobacterium profundum [2]
  • Bacillus subtilis [1]
  • Oleidesulfovibrio alaskensis [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [5]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [8]

Release Date

  • 2026 [1]
  • 2025 [2]
  • 2023 [3]
  • 2022 [1]
  • 2021 [5]

Author by name

  • Dobson RCJ [7]
  • North RA [7]
  • Friemann R [6]
  • Mace PD [6]
  • Allison JR [5]
  • Currie MJ [5]
  • Davies JS [5]
  • Indiveri C [5]
  • Newton-vesty MC [5]
  • Scalise M [5]
  • Abeysekera GS [4]
  • Demeler B [4]
  • Drew D [4]
  • Griffin MDW [4]
  • Gulati A [4]
  • Jamieson SA [4]
  • Wakatsuki S [4]
  • Wright JD [4]
  • Cook GM [3]
  • Hards K [3]
  • Harold LK [3]
  • Hummer G [3]
  • Krause KL [3]
  • Mehdipour AR [3]
  • Michel H [3]
  • Opel-reading HK [3]
  • Panjikar S [3]
  • Radloff M [3]
  • Safarian S [3]
  • Stewart I [3]
  • Welsch S [3]
  • Wu D [3]
  • Brookes E [2]
  • Copping JM [2]
  • Currie MC [2]
  • Hariprasad V [2]
  • Henrickson A [2]
  • Horne C [2]
  • Horne CR [2]
  • Morado DR [2]
  • Murphy JM [2]
  • Ramaswamy S [2]
  • Ramm G [2]
  • Remus DM [2]
  • Subramanian R [2]
  • Venugopal H [2]
  • Wahlgren WY [2]
  • Wood DM [2]
  • Baker L [1]
  • Bray JE [1]
  • Brown HG [1]
  • Brown SHJ [1]
  • Burgess AE [1]
  • Burke JE [1]
  • Chavent M [1]
  • Curry JR [1]
  • Dunlop JL [1]
  • El Omari K [1]
  • Filipcik P [1]
  • Hall KR [1]
  • Hanssen E [1]
  • Kleanthous C [1]
  • Landsberg MJ [1]
  • Landsberg MJL [1]
  • Lott JS [1]
  • Loughran T [1]
  • Loughran TA [1]
  • Low YS [1]
  • Lowe E [1]
  • Maiden MC [1]
  • Morado D [1]
  • Nyvall HG [1]
  • Quan S [1]
  • Raoelijaona F [1]
  • Rodriguez CM [1]
  • Schahl A [1]
  • Seiradake E [1]
  • Szczepaniak J [1]
  • Tillett ZD [1]
  • Turk LS [1]
  • Valimehr S [1]
  • Whitten AE [1]
  • Zhou JC [1]

Author by ORCID

  • North RA [6]
  • Dobson RCJ [6]
  • Mace PD [5]
  • Wakatsuki S [4]
  • Currie MJ [4]
  • Wright JD [4]
  • Davies JS [4]
  • Radloff M [3]
  • Hummer G [3]
  • Cook GM [3]
  • Mehdipour AR [3]
  • Safarian S [3]
  • Krause KL [3]
  • Welsch S [3]
  • Harold LK [3]
  • Jamieson SA [3]
  • Michel H [3]
  • Panjikar S [2]
  • Drew D [2]
  • Griffin MDW [2]
  • Demeler B [2]
  • Copping JM [2]
  • Friemann R [2]
  • Allison JR [2]
  • Ramaswamy S [2]
  • Wood DM [2]
  • Murphy JM [2]
  • Wahlgren WY [2]
  • Gulati A [2]
  • Horne CR [2]
  • Henrickson A [2]
  • Ramm G [2]
  • Scalise M [2]
  • Morado DR [2]
  • Zhou JC [1]
  • Schahl A [1]
  • Seiradake E [1]
  • Maiden MC [1]
  • Burke JE [1]
  • Baker L [1]
  • Low YS [1]
  • Lowe E [1]
  • Landsberg MJ [1]
  • Kleanthous C [1]
  • Burgess AE [1]
  • Rodriguez CM [1]
  • Turk LS [1]
  • Filipcik P [1]
  • Szczepaniak J [1]
  • El Omari K [1]
  • Bray JE [1]
  • Lott JS [1]
  • Brown SHJ [1]
  • Chavent M [1]
  • Loughran TA [1]
  • Nyvall HG [1]

Journal

  • NAT COMMUN [8]
  • ELIFE [2]
  • SCI ADV [1]
  • STRUCTURE [1]

Software

  • RELION [4]
  • CRYOSPARC [2]
  • CTFFIND [2]

Microscope

  • FEI TITAN KRIOS [8]
  • TFS KRIOS [2]
  • JEOL CRYO ARM 300 [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [12]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K3 6K X 4K [4]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [12]
  • AlphaFold DB [9]
  • UniProt [9]
  • Gene Ontology [7]
  • InterPro [7]
  • Pfam [7]
  • ChEBI [6]
  • DrugBank [6]
  • PDBe-Kb [6]
  • ChEMBL [2]
  • EMPIAR [1]
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Showing 1 - 10 of 12. Page 1 of 2
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EMD-71831
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3D View
Bacillus subtilis teneurin-like protein
CryoEM
Release date: May 6, 2026
Resolution: 3.74 Å
EM Method: Single-particle
Fitted PDBs: 9pt5
Q-score: 0.401

Raoelijaona F, Szczepaniak J, Schahl A, Bray JE, Zhou JC, Baker L, El Omari K, Lowe E, Low YS, Rodriguez CM, Landsberg MJ, Lott JS, Kleanthous C, Chavent M, Maiden MC, Seiradake E

Nat Commun (2026) 17 [ Pubmed: 41690916 DOI: doi:10.1038/s41467-026-69246-x ]

EMD-72036
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3D View
Cryo-EM structure of the isethionate TRAP transporter IseQM from Oleidesulfovibrio alaskensis with bound isethionate
CryoEM
Release date: Nov. 12, 2025
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 9pym
Q-score: 0.522

Newton-Vesty MC, Scalise M, Jamieson SA, Currie MJ, Brown HG, Valimehr S, Tillett ZD, Hall KR, Quan S, Allison JR, Whitten AE, Panjikar S, Indiveri C, Hanssen E, Mace PD, North RA, Dobson RCJ, Davies JS

Structure (2026) 34 pp. 133- [ DOI: doi:10.1016/j.str.2025.10.011 Pubmed: 41197622 ]

EMD-44638
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3D View
Structure of the human DDD-Ube2e2 complex
CryoEM
Release date: March 5, 2025
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 9bjz
Q-score: 0.494

Burgess AE, Loughran TA, Turk LS, Nyvall HG, Dunlop JL, Jamieson SA, Curry JR, Burke JE, Filipcik P, Brown SHJ, Mace PD

Sci Adv (2025) 11 pp. eadq4187-eadq4187 [ DOI: doi:10.1126/sciadv.adq4187 Pubmed: 40009677 ]

EMD-41265
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Cryo-EM structure of the Tripartite ATP-independent Periplasmic TRAP transporter SiaQM from Haemophilus influenzae parallel dimer
CryoEM
Release date: Nov. 22, 2023
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 8thi
Q-score: 0.411

Currie MJ, Davies JS, Scalise M, Gulati A, Wright JD, Newton-Vesty MC, Abeysekera GS, Subramanian R, Wahlgren WY, Friemann R, Allison JR, Mace PD, Griffin MDW, Demeler B, Wakatsuki S, Drew D, Indiveri C, Dobson RCJ, North RA

eLife (2024) 12 [ DOI: doi:10.7554/eLife.92307 Pubmed: 38349818 ]

EMD-41266
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Cryo-EM structure of the Tripartite ATP-independent Periplasmic TRAP transporter SiaQM from Haemophilus influenzae antiparallel dimer
CryoEM
Release date: Nov. 22, 2023
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8thj
Q-score: 0.52

Currie MJ, Davies JS, Scalise M, Gulati A, Wright JD, Newton-Vesty MC, Abeysekera GS, Subramanian R, Wahlgren WY, Friemann R, Allison JR, Mace PD, Griffin MDW, Demeler B, Wakatsuki S, Drew D, Indiveri C, Dobson RCJ, North RA

eLife (2024) 12 [ DOI: doi:10.7554/eLife.92307 Pubmed: 38349818 ]

EMD-15775
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Cryo-EM structure of the Tripartite ATP-independent Periplasmic TRAP transporter SiaQM from Photobacterium profundum in a nanodisc
CryoEM
Release date: March 15, 2023
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 8b01
Q-score: 0.539

Davies JS, Currie MJ, North RA, Scalise M, Wright JD, Copping JM, Remus DM, Gulati A, Morado DR, Jamieson SA, Newton-Vesty MC, Abeysekera GS, Ramaswamy S, Friemann R, Wakatsuki S, Allison JR, Indiveri C, Drew D, Mace PD, Dobson RCJ

Nat Commun (2023) 14 pp. 1120-1120 [ DOI: doi:10.1038/s41467-023-36590-1 Pubmed: 36849793 ]

EMD-13968
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3D View
Cryo-EM structure of the Tripartite ATP-independent Periplasmic TRAP transporter SiaQM from Photobacterium profundum in amphipol
CryoEM
Release date: Dec. 21, 2022
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7qha
Q-score: 0.48

Davies JS, Currie MJ, North RA, Scalise M, Wright JD, Copping JM, Remus DM, Gulati A, Morado DR, Jamieson SA, Newton-Vesty MC, Abeysekera GS, Ramaswamy S, Friemann R, Wakatsuki S, Allison JR, Indiveri C, Drew D, Mace PD, Dobson RCJ

Nat Commun (2023) 14 pp. 1120-1120 [ DOI: doi:10.1038/s41467-023-36590-1 Pubmed: 36849793 ]

EMD-12451
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Cryo-EM structure of the cytochrome bd oxidase from M. tuberculosis at 2.5 A resolution
CryoEM
Release date: Sept. 22, 2021
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7nkz
Q-score: 0.636

Safarian S, Opel-Reading HK, Wu D, Mehdipour AR, Hards K, Harold LK, Radloff M, Stewart I, Welsch S, Hummer G, Cook GM, Krause KL, Michel H

Nat Commun (2021) 12 pp. 5236-5236 [ DOI: doi:10.1038/s41467-021-25537-z Pubmed: 34475399 ]

EMD-12532
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Cryo-EM structure of the cytochrome bd oxidase from M. tuberculosis in presence of AD3-11 at 2.8 A resolution
CryoEM
Release date: Sept. 22, 2021
Resolution: 2.8 Å
EM Method: Single-particle

Safarian S, Opel-Reading HK, Wu D, Mehdipour AR, Hards K, Harold LK, Radloff M, Stewart I, Welsch S, Hummer G, Cook GM, Krause KL, Michel H

Nat Commun (2021) 12 pp. 5236-5236 [ DOI: doi:10.1038/s41467-021-25537-z Pubmed: 34475399 ]

EMD-12533
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Cryo-EM structure of the cytochrome bd oxidase from M. tuberculosis in presence of Aurachin D at 3.3 A resolution
CryoEM
Release date: Sept. 22, 2021
Resolution: 3.3 Å
EM Method: Single-particle

Safarian S, Opel-Reading HK, Wu D, Mehdipour AR, Hards K, Harold LK, Radloff M, Stewart I, Welsch S, Hummer G, Cook GM, Krause KL, Michel H

Nat Commun (2021) 12 pp. 5236-5236 [ DOI: doi:10.1038/s41467-021-25537-z Pubmed: 34475399 ]

Sort by: Download
Showing 1 - 10 of 12. Page 1 of 2
Display:
Statistics
×

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Preview first 10
Download

Filter By

Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Protein [12]
  • Ligand [6]
  • DNA [2]

Organism

  • Synthetic construct [4]
  • Helicobacter pylori [3]
  • Mycobacterium tuberculosis [3]
  • Photobacterium profundum [2]
  • Escherichia coli [2]
  • Haemophilus influenzae [2]
  • Photobacterium profundum [2]
  • Bacillus subtilis [1]
  • Oleidesulfovibrio alaskensis [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 2Å and < 3Å [6]
  • ≥ 3Å and < 4Å [5]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [8]

Release Date

  • 2026 [1]
  • 2025 [2]
  • 2023 [3]
  • 2022 [1]
  • 2021 [5]

Author by name

  • Dobson RCJ [7]
  • North RA [7]
  • Friemann R [6]
  • Mace PD [6]
  • Allison JR [5]
  • Currie MJ [5]
  • Davies JS [5]
  • Indiveri C [5]
  • Newton-vesty MC [5]
  • Scalise M [5]
  • Abeysekera GS [4]
  • Demeler B [4]
  • Drew D [4]
  • Griffin MDW [4]
  • Gulati A [4]
  • Jamieson SA [4]
  • Wakatsuki S [4]
  • Wright JD [4]
  • Cook GM [3]
  • Hards K [3]
  • Harold LK [3]
  • Hummer G [3]
  • Krause KL [3]
  • Mehdipour AR [3]
  • Michel H [3]
  • Opel-reading HK [3]
  • Panjikar S [3]
  • Radloff M [3]
  • Safarian S [3]
  • Stewart I [3]
  • Welsch S [3]
  • Wu D [3]
  • Brookes E [2]
  • Copping JM [2]
  • Currie MC [2]
  • Hariprasad V [2]
  • Henrickson A [2]
  • Horne C [2]
  • Horne CR [2]
  • Morado DR [2]
  • Murphy JM [2]
  • Ramaswamy S [2]
  • Ramm G [2]
  • Remus DM [2]
  • Subramanian R [2]
  • Venugopal H [2]
  • Wahlgren WY [2]
  • Wood DM [2]
  • Baker L [1]
  • Bray JE [1]
  • Brown HG [1]
  • Brown SHJ [1]
  • Burgess AE [1]
  • Burke JE [1]
  • Chavent M [1]
  • Curry JR [1]
  • Dunlop JL [1]
  • El Omari K [1]
  • Filipcik P [1]
  • Hall KR [1]
  • Hanssen E [1]
  • Kleanthous C [1]
  • Landsberg MJ [1]
  • Landsberg MJL [1]
  • Lott JS [1]
  • Loughran T [1]
  • Loughran TA [1]
  • Low YS [1]
  • Lowe E [1]
  • Maiden MC [1]
  • Morado D [1]
  • Nyvall HG [1]
  • Quan S [1]
  • Raoelijaona F [1]
  • Rodriguez CM [1]
  • Schahl A [1]
  • Seiradake E [1]
  • Szczepaniak J [1]
  • Tillett ZD [1]
  • Turk LS [1]
  • Valimehr S [1]
  • Whitten AE [1]
  • Zhou JC [1]

Author by ORCID

  • North RA [6]
  • Dobson RCJ [6]
  • Mace PD [5]
  • Wakatsuki S [4]
  • Currie MJ [4]
  • Wright JD [4]
  • Davies JS [4]
  • Radloff M [3]
  • Hummer G [3]
  • Cook GM [3]
  • Mehdipour AR [3]
  • Safarian S [3]
  • Krause KL [3]
  • Welsch S [3]
  • Harold LK [3]
  • Jamieson SA [3]
  • Michel H [3]
  • Panjikar S [2]
  • Drew D [2]
  • Griffin MDW [2]
  • Demeler B [2]
  • Copping JM [2]
  • Friemann R [2]
  • Allison JR [2]
  • Ramaswamy S [2]
  • Wood DM [2]
  • Murphy JM [2]
  • Wahlgren WY [2]
  • Gulati A [2]
  • Horne CR [2]
  • Henrickson A [2]
  • Ramm G [2]
  • Scalise M [2]
  • Morado DR [2]
  • Zhou JC [1]
  • Schahl A [1]
  • Seiradake E [1]
  • Maiden MC [1]
  • Burke JE [1]
  • Baker L [1]
  • Low YS [1]
  • Lowe E [1]
  • Landsberg MJ [1]
  • Kleanthous C [1]
  • Burgess AE [1]
  • Rodriguez CM [1]
  • Turk LS [1]
  • Filipcik P [1]
  • Szczepaniak J [1]
  • El Omari K [1]
  • Bray JE [1]
  • Lott JS [1]
  • Brown SHJ [1]
  • Chavent M [1]
  • Loughran TA [1]
  • Nyvall HG [1]

Journal

  • NAT COMMUN [8]
  • ELIFE [2]
  • SCI ADV [1]
  • STRUCTURE [1]

Software

  • RELION [4]
  • CRYOSPARC [2]
  • CTFFIND [2]

Microscope

  • FEI TITAN KRIOS [8]
  • TFS KRIOS [2]
  • JEOL CRYO ARM 300 [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [12]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K3 6K X 4K [4]
  • FEI FALCON III 4K X 4K [1]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [12]
  • AlphaFold DB [9]
  • UniProt [9]
  • Gene Ontology [7]
  • InterPro [7]
  • Pfam [7]
  • ChEBI [6]
  • DrugBank [6]
  • PDBe-Kb [6]
  • ChEMBL [2]
  • EMPIAR [1]