Electron Microscopy Data Bank

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grant_funding_details:"Knut and Alice Wallenberg Foundation"

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Current Database

Current status

Sample type

Organism

Homo sapiens [112]
Mus musculus [35]
Saccharomyces cerevisiae [31]
Neurospora crassa [31]
Synthetic construct [26]
Escherichia coli [21]
Escherichia coli [19]
Staphylococcus aureus [15]
Apilactobacillus kunkeei [14]
Tetrahymena thermophila [11]
Tetrahymena thermophila [11]
Saccharomyces cerevisiae [8]
Solanum lycopersicum [7]
Escherichia coli [7]
Desulfofustis sp. pb-srb1 [6]
Mycolicibacterium smegmatis [6]
Chaetomium thermophilum [6]
Neurospora crassa [6]
Toxoplasma gondii [6]
Escherichia coli [6]
Human mastadenovirus f [5]
Giardia intestinalis [5]
Candida albicans [5]
Severe acute respiratory syndrome coronavirus [5]
Chaetomium thermophilum [5]
Xenopus laevis [5]
Desulfacinum sp. [4]
Mycolicibacterium smegmatis [4]
Pseudomonas virus prd1 [4]
Chlamydomonas reinhardtii [4]
Gloeobacter violaceus [4]
Chikungunya virus [4]
Tuwongella immobilis [4]
Enterovirus c [3]
Gloeobacter violaceus [3]
Saccharomyces cerevisiae [3]
Giardia intestinalis [3]
Acetobacterium woodii [3]
Hepatitis b virus [2]
Endosymbiont of tevnia jerichonana [2]
Enterobacteria phage t4 [2]
Teetrevirus t3luria [2]
Bacillus subtilis [2]
Thermoanaerobacter kivui [2]
Paracoccus denitrificans [2]
Severe acute respiratory syndrome coronavirus [2]
Dubowvirus dv80alpha [2]
Avena sativa [2]
Human mastadenovirus d [2]
Equus caballus [2]
Bos taurus [2]
Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [1]
Gemmata obscuriglobus [1]
Enterovirus c [1]
(no species) [1]
Candidatus methanomethylophilus alvus [1]
Corynebacterium glutamicum [1]
Methanosarcina mazei [1]
Pyrococcus abyssi [1]
Phage m13mp18 [1]
Phietavirus pv52a [1]
Pyrococcus abyssi [1]
Escherichia coli [1]
(no species) [1]
Trypanosoma brucei [1]
Plasmodium falciparum [1]
Aequorea victoria [1]
Spodoptera frugiperda [1]
Escherichia coli [1]
Gallus gallus [1]
In vitro transcription vector pt7-tp(deltai) [1]
Bison bison [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Amunts A [104]
Singh V [56]
Itoh Y [51]
Naschberger A [50]
Rovsnik U [46]
Carroni M [44]
Mortezaei N [37]
Rorbach J [34]
Herrmann JM [31]
Brzezinski P [30]
Barrientos A [29]
Hogbom M [29]
Falkenberg M [26]
Gustafsson CM [26]
Howard RJ [26]
Hoberg E [25]
Jenninger L [25]
Johansson KAS [25]
Lindahl E [25]
Macao B [25]
Valenzuela S [25]
Zhu X [25]
Khawaja A [24]
Rubinstein JL [24]
Tobiasson V [24]
Churchman LS [21]
Wiseman B [21]
Cerutti R [20]
Corra S [20]
Davis H [20]
Minczuk M [20]
Nguyen MD [20]
Ott M [20]
Sillamaa S [20]
Silva-pinheiro P [20]
Suomalainen A [20]
Trifunovic A [20]
Viscomi C [20]
Volta S [20]
Zeviani M [20]
Zuppardo A [20]
Aibara S [19]
Andersson SGE [19]
Seeger C [19]
Muhleip A [18]
Kock Flygaard R [17]
Widmalm G [17]
Baradaran R [16]
Carlson LA [16]
Moe A [16]
Flygaard RK [15]
Kaila VRI [15]
Di Trani Jm [13]
Fontanesi F [13]
Kovalova T [13]
Bridgers JB [12]
Carlstrom A [12]
Couvillion MT [12]
Forsberg BO [12]
Gao J [12]
Shao S [12]
Sherpa D [12]
Wallden K [12]
Wan B [12]
Zhang J [12]
Gourdon P [11]
Li P [11]
Sanyal S [11]
Saura P [11]
Wang K [11]
Adori M [10]
Atanassov I [10]
Axel Innis C [10]
Castro Dopico X [10]
Di Trani J [10]
Drew D [10]
Li X [10]
Liu Y [10]
Nobe Y [10]
Nordin J [10]
Rubinstein J [10]
Shao Q [10]
Taoka M [10]
Andrell J [9]
Carlson L-A [9]
Cipullo M [9]
Couvillion M [9]
Debiasi-anders G [9]
Freyer C [9]
Gamiz-hernandez AP [9]
Glasgow RIC [9]
Hansson GC [9]
Huynen MA [9]
Krol S [9]
Mir-sanchis I [9]
Moedas MF [9]
Mogk A [9]
Moore D [9]
Moran JC [9]
Pena-perez L [9]

Author by ORCID

Amunts A [96]
Singh V [51]
Itoh Y [50]
Naschberger A [40]
Rovsnik U [35]
Rorbach J [31]
Herrmann JM [31]
Hogbom M [28]
Falkenberg M [26]
Carroni M [26]
Gustafsson CM [26]
Valenzuela S [25]
Johansson KAS [25]
Brzezinski P [23]
Wiseman B [21]
Khawaja A [21]
Churchman LS [21]
Viscomi C [20]
Macao B [20]
Sillamaa S [20]
Minczuk M [20]
Zuppardo A [20]
Silva-pinheiro P [20]
Zhu X [20]
Trifunovic A [20]
Nguyen MD [20]
Suomalainen A [20]
Cerutti R [20]
Howard RJ [19]
Rubinstein JL [18]
Widmalm G [17]
Tobiasson V [16]
Ott M [15]
Moe A [15]
Muhleip A [14]
Barrientos A [13]
Carlstrom A [12]
Lindahl E [12]
Baradaran R [12]
Shao S [12]
Wang K [11]
Gourdon P [11]
Taoka M [10]
Atanassov I [10]
Drew D [10]
Liu Y [10]
Nordin J [10]
Sanyal S [10]
Castro Dopico X [10]
Carlson LA [10]
Axel Innis C [10]
Kaila VRI [10]
Moedas MF [9]
Gamiz-hernandez AP [9]
Hansson GC [9]
Wredenberg A [9]
Qiao C [9]
Trillo-muyo S [9]
Rupp B [9]
Pena-perez L [9]
Mir-sanchis I [9]
Freyer C [9]
Debiasi-anders G [9]
Moran JC [9]
Rosenberger FA [9]
Modelska A [8]
Timon-gomez A [8]
Sierra-magro A [8]
Gulati A [8]
Mogk A [8]
Kovalova T [7]
Superti-furga G [7]
Jovine L [7]
Azinas S [7]
Lindkvist-petersson K [7]
Nomura N [7]
Li P [7]
Cottilli P [7]
Jenne T [7]
Ahn DH [7]
Fu Z [6]
Larsson NG [6]
Sheiner L [6]
Mandava CS [6]
Ermund A [6]
Sun M [6]
Flygaard RK [6]
Kock Flygaard R [6]
Ohlin M [6]
Forsberg BO [6]
Hagglund P [6]
Seeger C [6]
Fernandes P [6]
Cowen LE [5]
Whitesell L [5]
Miralles Fuste J [5]
Andersson SGE [5]
Giroux S [5]
Andrell J [5]
Gruszczyk AV [5]

Journal

NAT COMMUN [139]
TO BE PUBLISHED [48]
ELIFE [36]
NATURE [34]
NAT STRUCT MOL BIOL [26]
PNAS [23]
BIORXIV [14]
NUCLEIC ACIDS RES [14]
COMMUN BIOL [12]
STRUCTURE [12]
ACTA CRYSTALLOGR D STRUCT BIOL [11]
SCI ADV [10]
EMBO J [9]
EMBO REP [7]
PLANT COMMUN. [7]
LIFE SCI ALLIANCE [6]
BIOCHIM BIOPHYS ACTA MOL CELL RES [5]
CELL [5]
GENOME BIOL EVOL [5]
J AM CHEM SOC [5]
NAT PLANTS [5]
RES [5]
AM J KIDNEY DIS [4]
CURR TOP DEV BIOL [4]
J BIOL CHEM [3]
MOL BIOL CELL [3]
NAT CELL BIOL [3]
PROC SOC EXP BIOL MED [3]
SCIENCE [3]
ADV SCI [2]
ANNU REV BIOPHYS [2]
BIOCHEM BIOPHYS RES COMMUN [2]
BIOL CELL [2]
BIOL CELLULAIRE [2]
BMC BIOL. [2]
BR.J.PHARMACOL. [2]
CELL REP [2]
DEV BIOL [2]
FEBS LETT [2]
INT J DEV BIOL [2]
J CELL BIOL [2]
KIDNEY INT [2]
RES SQ [2]
BIOCHEM J [1]
BIOPHYS J [1]
CELL REP MED [1]
INT J MOL SCI [1]
ISCIENCE [1]
NAT METHODS [1]
NAT NANOTECHNOL [1]
PNAS NEXUS [1]

Software

Microscope

Electron Source

Film or detector model

External links

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EMDB [415]

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EMD-51873

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Assembly intermediate of human mitochondrial ribosome small subunit in complex with PUS1, METTL15 and RBFA IN conformation state M1

CryoEM

Release date: May 27, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9h51
Q-score: 0.327

Singh V, Shiriaev D, Bilalli L, Khawaja A, Rorbach J

To Be Published

EMD-54965

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Polysaccharide co-polymerase FepE open 7 subunit complex

CryoEM

Release date: May 27, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9ski
Q-score: 0.452

Wiseman B, Widmalm G, Hogbom M

Res (2026) 9 pp. 1276-1276 [ DOI: doi:10.34133/research.1276 Pubmed: 42131584 ]

EMD-54966

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Polysaccharide co-polymerase FepE open 8 subunit complex

CryoEM

Release date: May 27, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9skj
Q-score: 0.441

Wiseman B, Widmalm G, Hogbom M

Res (2026) 9 pp. 1276-1276 [ DOI: doi:10.34133/research.1276 Pubmed: 42131584 ]

EMD-54967

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Polysaccharide co-polymerase FepE open 9 subunit complex

CryoEM

Release date: May 27, 2026
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9skk
Q-score: 0.396

Wiseman B, Widmalm G, Hogbom M

Res (2026) 9 pp. 1276-1276 [ DOI: doi:10.34133/research.1276 Pubmed: 42131584 ]

EMD-54968

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Polysaccharide co-polymerase FepE closed 9 subunit complex C9 symmetry

CryoEM

Release date: May 27, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9skl
Q-score: 0.51

Wiseman B, Widmalm G, Hogbom M

Res (2026) 9 pp. 1276-1276 [ DOI: doi:10.34133/research.1276 Pubmed: 42131584 ]

EMD-54969

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Polysaccharide co-polymerase closed FepE 9 subunit complex C1 symmetry.

CryoEM

Release date: May 27, 2026
Resolution: 3.4 Å
EM Method: Single-particle

Wiseman B, Widmalm G, Hogbom M

Res (2026) 9 pp. 1276-1276 [ DOI: doi:10.34133/research.1276 Pubmed: 42131584 ]

EMD-51877

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Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M state N3

CryoEM

Release date: May 13, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9h55

Singh V, Shiriaev D, Bilalli L, Khawaja A, Rorbach J

To Be Published

EMD-51876

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Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and partial RBFA state N2

CryoEM

Release date: May 6, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9h54
Q-score: 0.257

Singh V, Shiriaev D, Bilalli L, Khawaja A, Rorbach J

To Be Published

EMD-55748

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E. coli Complex I WT purified in LMNG

CryoEM

Release date: May 6, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9taj
Q-score: 0.447

Beghiah A, Saura P, Kovalova T, Hoeser F, Friedrich T, Kaila VRI

To Be Published

EMD-55749

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Local refinement of E. coli Complex I WT membrane domain in LMNG

CryoEM

Release date: May 6, 2026
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9tak
Q-score: 0.562

Beghiah A, Saura P, Kovalova T, Hoeser F, Friedrich T, Kaila VRI

To Be Published

Sort by: Download

Showing 1 - 10 of 415. Page 1 of 42

Display:

Statistics

Download

Select database:

EMDB [415]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [112]
Mus musculus [35]
Saccharomyces cerevisiae [31]
Neurospora crassa [31]
Synthetic construct [26]
Escherichia coli [21]
Escherichia coli [19]
Staphylococcus aureus [15]
Apilactobacillus kunkeei [14]
Tetrahymena thermophila [11]
Tetrahymena thermophila [11]
Saccharomyces cerevisiae [8]
Solanum lycopersicum [7]
Escherichia coli [7]
Desulfofustis sp. pb-srb1 [6]
Mycolicibacterium smegmatis [6]
Chaetomium thermophilum [6]
Neurospora crassa [6]
Toxoplasma gondii [6]
Escherichia coli [6]
Human mastadenovirus f [5]
Giardia intestinalis [5]
Candida albicans [5]
Severe acute respiratory syndrome coronavirus [5]
Chaetomium thermophilum [5]
Xenopus laevis [5]
Desulfacinum sp. [4]
Mycolicibacterium smegmatis [4]
Pseudomonas virus prd1 [4]
Chlamydomonas reinhardtii [4]
Gloeobacter violaceus [4]
Chikungunya virus [4]
Tuwongella immobilis [4]
Enterovirus c [3]
Gloeobacter violaceus [3]
Saccharomyces cerevisiae [3]
Giardia intestinalis [3]
Acetobacterium woodii [3]
Hepatitis b virus [2]
Endosymbiont of tevnia jerichonana [2]
Enterobacteria phage t4 [2]
Teetrevirus t3luria [2]
Bacillus subtilis [2]
Thermoanaerobacter kivui [2]
Paracoccus denitrificans [2]
Severe acute respiratory syndrome coronavirus [2]
Dubowvirus dv80alpha [2]
Avena sativa [2]
Human mastadenovirus d [2]
Equus caballus [2]
Bos taurus [2]
Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [1]
Gemmata obscuriglobus [1]
Enterovirus c [1]
(no species) [1]
Candidatus methanomethylophilus alvus [1]
Corynebacterium glutamicum [1]
Methanosarcina mazei [1]
Pyrococcus abyssi [1]
Phage m13mp18 [1]
Phietavirus pv52a [1]
Pyrococcus abyssi [1]
Escherichia coli [1]
(no species) [1]
Trypanosoma brucei [1]
Plasmodium falciparum [1]
Aequorea victoria [1]
Spodoptera frugiperda [1]
Escherichia coli [1]
Gallus gallus [1]
In vitro transcription vector pt7-tp(deltai) [1]
Bison bison [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Amunts A [104]
Singh V [56]
Itoh Y [51]
Naschberger A [50]
Rovsnik U [46]
Carroni M [44]
Mortezaei N [37]
Rorbach J [34]
Herrmann JM [31]
Brzezinski P [30]
Barrientos A [29]
Hogbom M [29]
Falkenberg M [26]
Gustafsson CM [26]
Howard RJ [26]
Hoberg E [25]
Jenninger L [25]
Johansson KAS [25]
Lindahl E [25]
Macao B [25]
Valenzuela S [25]
Zhu X [25]
Khawaja A [24]
Rubinstein JL [24]
Tobiasson V [24]
Churchman LS [21]
Wiseman B [21]
Cerutti R [20]
Corra S [20]
Davis H [20]
Minczuk M [20]
Nguyen MD [20]
Ott M [20]
Sillamaa S [20]
Silva-pinheiro P [20]
Suomalainen A [20]
Trifunovic A [20]
Viscomi C [20]
Volta S [20]
Zeviani M [20]
Zuppardo A [20]
Aibara S [19]
Andersson SGE [19]
Seeger C [19]
Muhleip A [18]
Kock Flygaard R [17]
Widmalm G [17]
Baradaran R [16]
Carlson LA [16]
Moe A [16]
Flygaard RK [15]
Kaila VRI [15]
Di Trani Jm [13]
Fontanesi F [13]
Kovalova T [13]
Bridgers JB [12]
Carlstrom A [12]
Couvillion MT [12]
Forsberg BO [12]
Gao J [12]
Shao S [12]
Sherpa D [12]
Wallden K [12]
Wan B [12]
Zhang J [12]
Gourdon P [11]
Li P [11]
Sanyal S [11]
Saura P [11]
Wang K [11]
Adori M [10]
Atanassov I [10]
Axel Innis C [10]
Castro Dopico X [10]
Di Trani J [10]
Drew D [10]
Li X [10]
Liu Y [10]
Nobe Y [10]
Nordin J [10]
Rubinstein J [10]
Shao Q [10]
Taoka M [10]
Andrell J [9]
Carlson L-A [9]
Cipullo M [9]
Couvillion M [9]
Debiasi-anders G [9]
Freyer C [9]
Gamiz-hernandez AP [9]
Glasgow RIC [9]
Hansson GC [9]
Huynen MA [9]
Krol S [9]
Mir-sanchis I [9]
Moedas MF [9]
Mogk A [9]
Moore D [9]
Moran JC [9]
Pena-perez L [9]

Author by ORCID

Amunts A [96]
Singh V [51]
Itoh Y [50]
Naschberger A [40]
Rovsnik U [35]
Rorbach J [31]
Herrmann JM [31]
Hogbom M [28]
Falkenberg M [26]
Carroni M [26]
Gustafsson CM [26]
Valenzuela S [25]
Johansson KAS [25]
Brzezinski P [23]
Wiseman B [21]
Khawaja A [21]
Churchman LS [21]
Viscomi C [20]
Macao B [20]
Sillamaa S [20]
Minczuk M [20]
Zuppardo A [20]
Silva-pinheiro P [20]
Zhu X [20]
Trifunovic A [20]
Nguyen MD [20]
Suomalainen A [20]
Cerutti R [20]
Howard RJ [19]
Rubinstein JL [18]
Widmalm G [17]
Tobiasson V [16]
Ott M [15]
Moe A [15]
Muhleip A [14]
Barrientos A [13]
Carlstrom A [12]
Lindahl E [12]
Baradaran R [12]
Shao S [12]
Wang K [11]
Gourdon P [11]
Taoka M [10]
Atanassov I [10]
Drew D [10]
Liu Y [10]
Nordin J [10]
Sanyal S [10]
Castro Dopico X [10]
Carlson LA [10]
Axel Innis C [10]
Kaila VRI [10]
Moedas MF [9]
Gamiz-hernandez AP [9]
Hansson GC [9]
Wredenberg A [9]
Qiao C [9]
Trillo-muyo S [9]
Rupp B [9]
Pena-perez L [9]
Mir-sanchis I [9]
Freyer C [9]
Debiasi-anders G [9]
Moran JC [9]
Rosenberger FA [9]
Modelska A [8]
Timon-gomez A [8]
Sierra-magro A [8]
Gulati A [8]
Mogk A [8]
Kovalova T [7]
Superti-furga G [7]
Jovine L [7]
Azinas S [7]
Lindkvist-petersson K [7]
Nomura N [7]
Li P [7]
Cottilli P [7]
Jenne T [7]
Ahn DH [7]
Fu Z [6]
Larsson NG [6]
Sheiner L [6]
Mandava CS [6]
Ermund A [6]
Sun M [6]
Flygaard RK [6]
Kock Flygaard R [6]
Ohlin M [6]
Forsberg BO [6]
Hagglund P [6]
Seeger C [6]
Fernandes P [6]
Cowen LE [5]
Whitesell L [5]
Miralles Fuste J [5]
Andersson SGE [5]
Giroux S [5]
Andrell J [5]
Gruszczyk AV [5]

Journal

NAT COMMUN [139]
TO BE PUBLISHED [48]
ELIFE [36]
NATURE [34]
NAT STRUCT MOL BIOL [26]
PNAS [23]
BIORXIV [14]
NUCLEIC ACIDS RES [14]
COMMUN BIOL [12]
STRUCTURE [12]
ACTA CRYSTALLOGR D STRUCT BIOL [11]
SCI ADV [10]
EMBO J [9]
EMBO REP [7]
PLANT COMMUN. [7]
LIFE SCI ALLIANCE [6]
BIOCHIM BIOPHYS ACTA MOL CELL RES [5]
CELL [5]
GENOME BIOL EVOL [5]
J AM CHEM SOC [5]
NAT PLANTS [5]
RES [5]
AM J KIDNEY DIS [4]
CURR TOP DEV BIOL [4]
J BIOL CHEM [3]
MOL BIOL CELL [3]
NAT CELL BIOL [3]
PROC SOC EXP BIOL MED [3]
SCIENCE [3]
ADV SCI [2]
ANNU REV BIOPHYS [2]
BIOCHEM BIOPHYS RES COMMUN [2]
BIOL CELL [2]
BIOL CELLULAIRE [2]
BMC BIOL. [2]
BR.J.PHARMACOL. [2]
CELL REP [2]
DEV BIOL [2]
FEBS LETT [2]
INT J DEV BIOL [2]
J CELL BIOL [2]
KIDNEY INT [2]
RES SQ [2]
BIOCHEM J [1]
BIOPHYS J [1]
CELL REP MED [1]
INT J MOL SCI [1]
ISCIENCE [1]
NAT METHODS [1]
NAT NANOTECHNOL [1]
PNAS NEXUS [1]

Software

Microscope

Electron Source

Film or detector model

External links