Electron Microscopy Data Bank

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grant_funding_details:"Israel Science Foundation"

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Current Database

Current status

Sample type

Organism

Homo sapiens [47]
Dunaliella salina [9]
Chrysotila carterae [7]
Mus musculus [6]
Rhodobacter capsulatus [6]
Chlamydomonas reinhardtii [6]
Leishmania major [6]
Trypanosoma brucei [5]
Bacillus subtilis [4]
Chlorella ohadii [4]
Enterobacteria phage t4 [4]
Pisum sativum [4]
(no species) [4]
Camelus dromedarius [4]
Sabia mammarenavirus (isolate human/brasil/sph114202/1990) [3]
Saccharomyces cerevisiae [3]
Leishmania major [3]
Bos taurus [3]
Rattus norvegicus [2]
Avena sativa [2]
Leishmania mexicana [2]
(no species) [1]
Uperoleia mjobergii [1]
Synechocystis sp. pcc 6803 [1]
Ranoidea raniformis [1]
Bacillus anthracis [1]
Severe acute respiratory syndrome coronavirus [1]
Escherichia virus t3 [1]
Cyanidioschyzon merolae [1]
Promethearchaeia archaeon [1]
Magnetospirillum gryphiswaldense [1]
Bacillus subtilis [1]
Caenorhabditis elegans [1]
Mammarenavirus lujoense [1]
(no species) [1]
Escherichia coli [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Nelson N [28]
Elbaum M [24]
Fadeeva M [21]
Zalk R [20]
Caspy I [19]
Varsano N [17]
Kirchweger P [16]
Klaiman D [14]
Rajan KS [14]
Yonath A [14]
Bashan A [13]
Fass D [13]
Wolf SG [13]
Shkolnisky Y [11]
Arie M [10]
Matzov D [10]
Navon A [10]
Stanhill A [10]
Szenkier N [10]
Elad N [9]
Aryal S [8]
Cohen-chalamish S [8]
Doniger T [8]
Isobe T [8]
Kam Z [8]
Madmoni H [8]
Michaeli S [8]
Nobe Y [8]
Taoka M [8]
Unger R [8]
Zarivach R [8]
Arigovindan M [7]
Cang H [7]
Dadosh T [7]
Gal A [7]
Guez-haddad J [7]
Hons M [7]
Kadan Y [7]
Karmona R [7]
Khazma T [7]
Lucas J [7]
Mahamid J [7]
Mcdonald A [7]
Murre C [7]
Opatowsky Y [7]
Resch GP [7]
Sedat J [7]
Seifer S [7]
Tollervey F [7]
Braitbard M [6]
Daldal F [6]
Garcia BA [6]
Isupov MN [6]
Khmelnitsky L [6]
Kim HJ [6]
Murakami K [6]
Ozturk Y [6]
Schneidman-duhovny D [6]
Selamoglu N [6]
Singh SK [6]
Steimle S [6]
Van Eeuwen T [6]
Yeshaya N [6]
Van Eeuwen T [6]
Alon G [5]
Alon-zchut G [5]
Blumberg A [5]
Brik A [5]
Cong Y [5]
Day S [5]
Ding Z [5]
Galili Kostin B [5]
Glickman MH [5]
Huynh TT [5]
Kleifeld O [5]
Mali SM [5]
Mazor Y [5]
Morag R [5]
Papo N [5]
Rivalta A [5]
Rozenberg A [5]
Sahoo MP [5]
Sahu I [5]
Schwartz S [5]
Sulkshane P [5]
Wang Y [5]
Weizmann Y [5]
Xu C [5]
Zalutsky MR [5]
Zimmerman E [5]
Ben-tal N [4]
Cohen-dvashi H [4]
Dessau M [4]
Diskin R [4]
Edel KM [4]
Javitt G [4]
Mim C [4]
Schwartz T [4]
Sharon M [4]
Sporny M [4]

Author by ORCID

Nelson N [18]
Elbaum M [16]
Caspy I [16]
Rajan KS [13]
Kirchweger P [10]
Taoka M [8]
Mahamid J [7]
Fass D [7]
Wolf SG [7]
Gal A [7]
Khmelnitsky L [6]
Kim HJ [6]
Murakami K [6]
Daldal F [6]
Klaiman D [6]
Hons M [6]
Yeshaya N [6]
Van Eeuwen T [6]
Mazor Y [5]
Fadeeva M [5]
Doniger T [5]
Rivalta A [5]
Brik A [5]
Shkolnisky Y [5]
Wang Y [5]
Glickman MH [5]
Sahu I [5]
Zalutsky MR [5]
Sulkshane P [5]
Cong Y [5]
Bashan A [5]
Michaeli S [5]
Kleifeld O [5]
Unger R [5]
Zalk R [5]
Singh SK [5]
Mim C [4]
Isupov MN [4]
Yaron A [4]
Dessau M [4]
Diskin R [4]
Seifer S [4]
Varsano N [4]
Opatowsky Y [4]
Javitt G [4]
Edel KM [4]
Elad N [3]
Lubitz W [3]
Schuster G [3]
Frank GA [3]
Upcher A [3]
Hiregange DG [3]
Kalisman YL [3]
Grossman A [3]
Lubell WD [3]
Nechushtai R [3]
Treves H [3]
Reznik N [3]
Frank A [3]
Nowaczyk MM [3]
Castano JD [3]
Neumann E [3]
Schuhmann W [3]
Sharon M [3]
Fernandez-prada C [3]
Bora Bhowal K [3]
Olami M [3]
Jayaraman V [2]
Zarivach R [2]
Tirosh A [2]
Albeck S [2]
Schuldiner M [2]
Jungwirth J [2]
Peleg Y [2]
Rosenblum G [2]
Landau M [2]
Rozenberg H [2]
Vimer S [2]
Dym O [2]
Grunewald K [2]
Plender EG [2]
Fraser JS [2]
Garcia-alai M [2]
Dabas H [2]
Eichler EE [2]
Kamyshinsky R [2]
Swain PP [2]
Seuring C [2]
Hofmann H [2]
Zalckvar E [2]
Wiggers F [2]
Angel M [2]
Sivan E [2]
Peer L [2]
Lambrev PH [1]
Mazor O [1]
Cohen-schwartz S [1]
Asher NB [1]
Lewis MG [1]
Siegler N [1]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-53927

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Cryo-ET of endothelial cells cultured on electrospun gelatin fibers

CryoEM

Release date: May 6, 2026
EM Method: Tomography

Tcherner Elad S, Vilensky R, Asher NB, Logvina N, Zalk R, Zussman E, Engel L

Nanoscale (2025) 17 pp. 14687-14695 [ DOI: doi:10.1039/d4nr05508j Pubmed: 40462761 ]

EMD-55773

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Leishmania mexicana secreted acid phosphatase

CryoEM

Release date: April 29, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9tbj
Q-score: 0.543

Bose P, Dahan I, Upcher A, Zalk R, Grossman-Haham I

Protein Sci (2026) 35 pp. e70591-e70591 [ DOI: doi:10.1002/pro.70591 Pubmed: 42010818 ]

EMD-56536

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Leishmania mexicana secreted acid phosphatase at pH 5.6

CryoEM

Release date: April 29, 2026
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 28ik
Q-score: 0.46

Bose P, Dahan I, Upcher A, Zalk R, Grossman-Haham I

Protein Sci (2026) 35 pp. e70591-e70591 [ DOI: doi:10.1002/pro.70591 Pubmed: 42010818 ]

EMD-52846

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STRUCTURE OF UNSTACKED C2S2-TYPE PSII-LHCII SUPERCOMPLEX FROM PISUM SATIVUM

CryoEM

Release date: Jan. 28, 2026
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 9ifm
Q-score: 0.599

Klaiman D, Fadeeva M, Nelson N

To Be Published

EMD-55810

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Deconvolved piDPC tomogram of lift-out lamellae from cell-derived matrices

CryoEM

Release date: Dec. 17, 2025
EM Method: Tomography

Kirchweger P, Seifer S, Wolf SG, Varsano N, Zens B, Schur FK, Elbaum M

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.26.690630 ]

EMD-55811

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Deconvolved piDPC tomogram of lift-out lamellae from cell-derived matrices

CryoEM

Release date: Dec. 17, 2025
EM Method: Tomography

Kirchweger P, Seifer S, Wolf SG, Varsano N, Zens B, Schur FK, Elbaum M

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.26.690630 ]

EMD-55812

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Deconvolved piDPC tomogram of lift-out lamellae from cell-derived matrices recorded on the Opal detector

CryoEM

Release date: Dec. 17, 2025
EM Method: Tomography

Kirchweger P, Seifer S, Wolf SG, Varsano N, Zens B, Schur FK, Elbaum M

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.26.690630 ]

EMD-52077

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Universal Photosystem II Intermediate with Light-Dependent Water-Ferrocyanide Oxydo-reductase activity from Chlamydomonas reinhardtii

CryoEM

Release date: Nov. 26, 2025
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 9hei
Q-score: 0.51

Nelson N, Klaiman D, Fadeeva M, Kandiah E

To Be Published

EMD-51772

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Cryo-EM structure of Heterooligomeric Bacterioferritin

CryoEM

Release date: Oct. 29, 2025
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 9h1u
Q-score: 0.6

Stein D, Jartoux B, Dror S, Uebe R, Koubkova-Yu TC, Zalk R, Shahar A, Zarivach R, Frank GA

PNAS (2026) 123 pp. e2504561123-e2504561123 [ DOI: doi:10.1073/pnas.2504561123 Pubmed: 41609675 ]

EMD-52247

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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN

Composite map

CryoEM

Release date: Oct. 15, 2025
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 9hl9
Q-score: 0.653

Bora Bhowal K, Nguyen AMT, Ibarra-Meneses AV, Brito Lira A, Rajan KS, Castano JD, Beaudry F, Bashan A, Fernandez-Prada C, Olivier M, Yonath A, Lubell WD

J Med Chem (2025) 68 pp. 20264-20282 [ Pubmed: 40980996 DOI: doi:10.1021/acs.jmedchem.5c01291 ]

Sort by: Download

Showing 1 - 10 of 135. Page 1 of 14

Display:

Statistics

Download

Select database:

EMDB [135]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [47]
Dunaliella salina [9]
Chrysotila carterae [7]
Mus musculus [6]
Rhodobacter capsulatus [6]
Chlamydomonas reinhardtii [6]
Leishmania major [6]
Trypanosoma brucei [5]
Bacillus subtilis [4]
Chlorella ohadii [4]
Enterobacteria phage t4 [4]
Pisum sativum [4]
(no species) [4]
Camelus dromedarius [4]
Sabia mammarenavirus (isolate human/brasil/sph114202/1990) [3]
Saccharomyces cerevisiae [3]
Leishmania major [3]
Bos taurus [3]
Rattus norvegicus [2]
Avena sativa [2]
Leishmania mexicana [2]
(no species) [1]
Uperoleia mjobergii [1]
Synechocystis sp. pcc 6803 [1]
Ranoidea raniformis [1]
Bacillus anthracis [1]
Severe acute respiratory syndrome coronavirus [1]
Escherichia virus t3 [1]
Cyanidioschyzon merolae [1]
Promethearchaeia archaeon [1]
Magnetospirillum gryphiswaldense [1]
Bacillus subtilis [1]
Caenorhabditis elegans [1]
Mammarenavirus lujoense [1]
(no species) [1]
Escherichia coli [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Nelson N [28]
Elbaum M [24]
Fadeeva M [21]
Zalk R [20]
Caspy I [19]
Varsano N [17]
Kirchweger P [16]
Klaiman D [14]
Rajan KS [14]
Yonath A [14]
Bashan A [13]
Fass D [13]
Wolf SG [13]
Shkolnisky Y [11]
Arie M [10]
Matzov D [10]
Navon A [10]
Stanhill A [10]
Szenkier N [10]
Elad N [9]
Aryal S [8]
Cohen-chalamish S [8]
Doniger T [8]
Isobe T [8]
Kam Z [8]
Madmoni H [8]
Michaeli S [8]
Nobe Y [8]
Taoka M [8]
Unger R [8]
Zarivach R [8]
Arigovindan M [7]
Cang H [7]
Dadosh T [7]
Gal A [7]
Guez-haddad J [7]
Hons M [7]
Kadan Y [7]
Karmona R [7]
Khazma T [7]
Lucas J [7]
Mahamid J [7]
Mcdonald A [7]
Murre C [7]
Opatowsky Y [7]
Resch GP [7]
Sedat J [7]
Seifer S [7]
Tollervey F [7]
Braitbard M [6]
Daldal F [6]
Garcia BA [6]
Isupov MN [6]
Khmelnitsky L [6]
Kim HJ [6]
Murakami K [6]
Ozturk Y [6]
Schneidman-duhovny D [6]
Selamoglu N [6]
Singh SK [6]
Steimle S [6]
Van Eeuwen T [6]
Yeshaya N [6]
Van Eeuwen T [6]
Alon G [5]
Alon-zchut G [5]
Blumberg A [5]
Brik A [5]
Cong Y [5]
Day S [5]
Ding Z [5]
Galili Kostin B [5]
Glickman MH [5]
Huynh TT [5]
Kleifeld O [5]
Mali SM [5]
Mazor Y [5]
Morag R [5]
Papo N [5]
Rivalta A [5]
Rozenberg A [5]
Sahoo MP [5]
Sahu I [5]
Schwartz S [5]
Sulkshane P [5]
Wang Y [5]
Weizmann Y [5]
Xu C [5]
Zalutsky MR [5]
Zimmerman E [5]
Ben-tal N [4]
Cohen-dvashi H [4]
Dessau M [4]
Diskin R [4]
Edel KM [4]
Javitt G [4]
Mim C [4]
Schwartz T [4]
Sharon M [4]
Sporny M [4]

Author by ORCID

Nelson N [18]
Elbaum M [16]
Caspy I [16]
Rajan KS [13]
Kirchweger P [10]
Taoka M [8]
Mahamid J [7]
Fass D [7]
Wolf SG [7]
Gal A [7]
Khmelnitsky L [6]
Kim HJ [6]
Murakami K [6]
Daldal F [6]
Klaiman D [6]
Hons M [6]
Yeshaya N [6]
Van Eeuwen T [6]
Mazor Y [5]
Fadeeva M [5]
Doniger T [5]
Rivalta A [5]
Brik A [5]
Shkolnisky Y [5]
Wang Y [5]
Glickman MH [5]
Sahu I [5]
Zalutsky MR [5]
Sulkshane P [5]
Cong Y [5]
Bashan A [5]
Michaeli S [5]
Kleifeld O [5]
Unger R [5]
Zalk R [5]
Singh SK [5]
Mim C [4]
Isupov MN [4]
Yaron A [4]
Dessau M [4]
Diskin R [4]
Seifer S [4]
Varsano N [4]
Opatowsky Y [4]
Javitt G [4]
Edel KM [4]
Elad N [3]
Lubitz W [3]
Schuster G [3]
Frank GA [3]
Upcher A [3]
Hiregange DG [3]
Kalisman YL [3]
Grossman A [3]
Lubell WD [3]
Nechushtai R [3]
Treves H [3]
Reznik N [3]
Frank A [3]
Nowaczyk MM [3]
Castano JD [3]
Neumann E [3]
Schuhmann W [3]
Sharon M [3]
Fernandez-prada C [3]
Bora Bhowal K [3]
Olami M [3]
Jayaraman V [2]
Zarivach R [2]
Tirosh A [2]
Albeck S [2]
Schuldiner M [2]
Jungwirth J [2]
Peleg Y [2]
Rosenblum G [2]
Landau M [2]
Rozenberg H [2]
Vimer S [2]
Dym O [2]
Grunewald K [2]
Plender EG [2]
Fraser JS [2]
Garcia-alai M [2]
Dabas H [2]
Eichler EE [2]
Kamyshinsky R [2]
Swain PP [2]
Seuring C [2]
Hofmann H [2]
Zalckvar E [2]
Wiggers F [2]
Angel M [2]
Sivan E [2]
Peer L [2]
Lambrev PH [1]
Mazor O [1]
Cohen-schwartz S [1]
Asher NB [1]
Lewis MG [1]
Siegler N [1]

Journal

Software

Microscope

Electron Source

Film or detector model

External links