Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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grant_funding_details:"Aligning Science Across Parkinsons (ASAP)"

Filter By

Current Database

  • EMDB [41]

Current status

  • REL [41]

Sample type

  • Complex [28]
  • Protein [18]
  • Cell [11]
  • Ligand [4]
  • Cellular component [2]

Organism

  • Homo sapiens [40]
  • Mus musculus [1]

EM Method

  • Single-particle [22]
  • Subtomogram averaging [13]
  • Tomography [6]

Resolution

  • ≥ 2Å and < 3Å [11]
  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [3]
  • ≥ 20Å and < 30Å [3]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [8]
  • 500-1000 kDa [4]

Release Date

  • 2025 [29]
  • 2024 [12]

Author by name

  • Harper JW [15]
  • Hurley JH [15]
  • Chen M [13]
  • Cook ASI [13]
  • Garcia SN [13]
  • Hummer G [13]
  • Iavarone AT [13]
  • Khuu G [13]
  • Lazarou M [13]
  • Rao S [13]
  • Ren X [13]
  • Schulman BA [13]
  • Yang M [13]
  • Cabezudo AC [12]
  • Nguyen TN [12]
  • Adolf F [9]
  • Du J [9]
  • Goodall EA [9]
  • Hanna J [9]
  • Hanna JW [9]
  • Rawson S [9]
  • Rawson SD [9]
  • Walsh Jr Rm [9]
  • Von Gronau S [9]
  • Wilfling F [8]
  • Basiashvili T [6]
  • Chen S [6]
  • Hutchings J [6]
  • Jiang Y [6]
  • Leschziner AE [6]
  • Paulo JA [6]
  • Villa E [6]
  • Abdussalam A [5]
  • Alegrio Louro J [5]
  • Antico O [5]
  • Ehses K [5]
  • Fernandez-busnadiego R [5]
  • Lopez-alonso JP [5]
  • Muqit MMK [5]
  • Sanz Murillo M [5]
  • Ubarretxena-belandia I [5]
  • Villagran Suarez A [5]
  • Bieber A [4]
  • Capitanio C [4]
  • Gygi SP [4]
  • He Y [4]
  • Kraus F [4]
  • Smith IR [4]
  • Ambaw YA [2]
  • Anderson BJ [2]
  • Baumeister W [2]
  • Brenner J [2]
  • Celebi AY [2]
  • Coon JJ [2]
  • Farese R [2]
  • Gasparoli FM [2]
  • Gonzalez-lozano MA [2]
  • Harper WJ [2]
  • Herrmann E [2]
  • Hoyer MJ [2]
  • Jen A [2]
  • Kakudji E [2]
  • Lee C [2]
  • Lewis SC [2]
  • Li D [2]
  • Lizarrondo J [2]
  • Nightingale NM [2]
  • Overmyer KA [2]
  • Paoli JC [2]
  • Plitzko JM [2]
  • Rose K [2]
  • Swarup S [2]
  • Walther TC [2]
  • Claveras-cabezudo A [1]
  • Hurley JHH [1]
  • Louro JA [1]
  • Murillo MS [1]
  • Ngyuen TN [1]
  • Suarez AV [1]
  • Xiong E [1]

Author by ORCID

  • Harper JW [15]
  • Hurley JH [14]
  • Schulman BA [13]
  • Garcia SN [12]
  • Cook ASI [12]
  • Hummer G [12]
  • Nguyen TN [12]
  • Khuu G [12]
  • Ren X [12]
  • Chen M [12]
  • Cabezudo AC [12]
  • Lazarou M [12]
  • Rao S [12]
  • Yang M [12]
  • Goodall EA [9]
  • Rawson S [9]
  • Walsh Jr Rm [9]
  • Adolf F [9]
  • Du J [9]
  • Hanna J [9]
  • Wilfling F [8]
  • Paulo JA [6]
  • Gygi SP [4]
  • Jiang Y [4]
  • Kraus F [4]
  • Capitanio C [4]
  • He Y [4]
  • Bieber A [2]
  • Lizarrondo J [2]
  • Jen A [2]
  • Anderson BJ [2]
  • Lewis SC [2]
  • Gasparoli FM [2]
  • Farese R [2]
  • Baumeister W [2]
  • Paoli JC [2]
  • Coon JJ [2]
  • Overmyer KA [2]
  • Smith IR [2]
  • Lee C [2]
  • Plitzko JM [2]
  • Gonzalez-lozano MA [2]
  • Rose K [2]
  • Swarup S [2]
  • Herrmann E [2]
  • Brenner J [2]
  • Walther TC [2]
  • Ambaw YA [2]
  • Nightingale NM [2]
  • Li D [2]
  • Kakudji E [2]

Journal

  • BIORXIV [12]
  • SCIENCE [12]
  • NAT STRUCT MOL BIOL [9]
  • ELIFE [6]
  • TO BE PUBLISHED [6]
  • NAT CELL BIOL [2]
  • PNAS [2]
  • SCI ADV [2]

Software

  • CRYOSPARC [13]
  • RELION [12]
  • DYNAMO [11]
  • WARP [11]
  • UCSF CHIMERAX [6]
  • MATLAB [5]
  • IMOD [4]
  • ISOLDE [4]

Microscope

  • TFS KRIOS [26]
  • FEI TITAN KRIOS [11]
  • TFS GLACIOS [4]

Electron Source

  • FIELD EMISSION GUN [41]

Film or detector model

  • GATAN K3 6K X 4K [19]
  • FEI FALCON IV 4K X 4K [13]
  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [4]

External links

  • AlphaFold DB [18]
  • PDBe-Kb [18]
  • UniProt [18]
  • Gene Ontology [13]
  • InterPro [13]
  • PDB [13]
  • Pfam [13]
  • Complex Portal [9]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]
Sort by: Download
Showing 1 - 10 of 41. Page 1 of 5
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EMD-55203
Download Map
3D View
Subtomogram average of the 39S mitochondrial ribosome from HeLa
Release date: Dec. 3, 2025
Resolution: 15.92 Å
EM Method: Subtomogram averaging

Ehses K, Lopez-Alonso JP, Antico O, Abdussalam A, Muqit MMK, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-55204
Download Map
3D View
Subtomogram average of the 55S mitochondrial ribosome from HeLa
Release date: Dec. 3, 2025
Resolution: 22.89 Å
EM Method: Subtomogram averaging

Ehses K, Lopez-Alonso JP, Antico O, Abdussalam A, Muqit MMK, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-55205
Download Map
3D View
Subtomogram average of the mtHsp60 singlering complex from HeLa
Release date: Dec. 3, 2025
Resolution: 13.67 Å
EM Method: Subtomogram averaging

Ehses K, Lopez-Alonso JP, Antico O, Abdussalam A, Muqit MMK, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-55206
Download Map
3D View
Subtomogram average of the mtHsp60:mtHsp10 half-football complex from HeLa
Release date: Dec. 3, 2025
Resolution: 14.3 Å
EM Method: Subtomogram averaging

Ehses K, Lopez-Alonso JP, Antico O, Abdussalam A, Muqit MMK, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-55207
Download Map
3D View
Subtomogram average of the mtHsp60:mtHsp10 Football complex from HeLa
Release date: Dec. 3, 2025
Resolution: 7.76 Å
EM Method: Subtomogram averaging

Ehses K, Lopez-Alonso JP, Antico O, Abdussalam A, Muqit MMK, Ubarretxena-Belandia I, Fernandez-Busnadiego R

To Be Published

EMD-55210
Download Map
3D View
In situ cryo-ET tomogram of HeLa TMEM192-3xHA Control cell showcasing an endolysosomal structure.
Release date: Dec. 3, 2025
EM Method: Tomography

Kraus F, He Y, Jiang Y, Li D, Ambaw YA, Gasparoli FM, Paulo JA, Walther TC, Farese R, Gygi SP, Wilfling F, Harper JW

bioRxiv (2025) [ Pubmed: 41279717 DOI: doi:10.1101/2025.10.08.681047 ]

EMD-55211
Download Map
3D View
In situ cryo-ET tomogram of HeLa TMEM192-3xHA ASAH1-/- cell showcasing an endolysosomal structure
Release date: Dec. 3, 2025
EM Method: Tomography

Kraus F, He Y, Jiang Y, Li D, Ambaw YA, Gasparoli FM, Paulo JA, Walther TC, Farese R, Gygi SP, Wilfling F, Harper JW

bioRxiv (2025) [ Pubmed: 41279717 DOI: doi:10.1101/2025.10.08.681047 ]

EMD-45592
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3D View
13-pf microtubule from the LRRK2 I2020T and MLi-2 dataset
Release date: May 14, 2025
Resolution: 5.9 Å
EM Method: Subtomogram averaging

Chen S, Basiashvili T, Hutchings J, Sanz Murillo M, Villagran Suarez A, Alegrio Louro J, Leschziner AE, Villa E

eLife (2024) [ DOI: doi:10.7554/elife.100799.1 ]

EMD-45593
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3D View
Focused refinement map of WD40:ARM/ANK interface from LRRK2 I2020T MLi-2 dataset
Release date: May 14, 2025
Resolution: 8.9 Å
EM Method: Subtomogram averaging

Chen S, Basiashvili T, Hutchings J, Sanz Murillo M, Villagran Suarez A, Alegrio Louro J, Leschziner AE, Villa E

eLife (2024) [ DOI: doi:10.7554/elife.100799.1 ]

EMD-45594
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3D View
Full-length autoinhibited LRRK2 I2020T co-polymerized with microtubules and MLi-2
Release date: May 14, 2025
Resolution: 8.3 Å
EM Method: Subtomogram averaging

Chen S, Basiashvili T, Hutchings J, Sanz Murillo M, Villagran Suarez A, Alegrio Louro J, Leschziner AE, Villa E

eLife (2024) [ DOI: doi:10.7554/elife.100799.1 ]

Sort by: Download
Showing 1 - 10 of 41. Page 1 of 5
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [41]

Current status

  • REL [41]

Sample type

  • Complex [28]
  • Protein [18]
  • Cell [11]
  • Ligand [4]
  • Cellular component [2]

Organism

  • Homo sapiens [40]
  • Mus musculus [1]

EM Method

  • Single-particle [22]
  • Subtomogram averaging [13]
  • Tomography [6]

Resolution

  • ≥ 2Å and < 3Å [11]
  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [3]
  • ≥ 20Å and < 30Å [3]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [8]
  • 500-1000 kDa [4]

Release Date

  • 2025 [29]
  • 2024 [12]

Author by name

  • Harper JW [15]
  • Hurley JH [15]
  • Chen M [13]
  • Cook ASI [13]
  • Garcia SN [13]
  • Hummer G [13]
  • Iavarone AT [13]
  • Khuu G [13]
  • Lazarou M [13]
  • Rao S [13]
  • Ren X [13]
  • Schulman BA [13]
  • Yang M [13]
  • Cabezudo AC [12]
  • Nguyen TN [12]
  • Adolf F [9]
  • Du J [9]
  • Goodall EA [9]
  • Hanna J [9]
  • Hanna JW [9]
  • Rawson S [9]
  • Rawson SD [9]
  • Walsh Jr Rm [9]
  • Von Gronau S [9]
  • Wilfling F [8]
  • Basiashvili T [6]
  • Chen S [6]
  • Hutchings J [6]
  • Jiang Y [6]
  • Leschziner AE [6]
  • Paulo JA [6]
  • Villa E [6]
  • Abdussalam A [5]
  • Alegrio Louro J [5]
  • Antico O [5]
  • Ehses K [5]
  • Fernandez-busnadiego R [5]
  • Lopez-alonso JP [5]
  • Muqit MMK [5]
  • Sanz Murillo M [5]
  • Ubarretxena-belandia I [5]
  • Villagran Suarez A [5]
  • Bieber A [4]
  • Capitanio C [4]
  • Gygi SP [4]
  • He Y [4]
  • Kraus F [4]
  • Smith IR [4]
  • Ambaw YA [2]
  • Anderson BJ [2]
  • Baumeister W [2]
  • Brenner J [2]
  • Celebi AY [2]
  • Coon JJ [2]
  • Farese R [2]
  • Gasparoli FM [2]
  • Gonzalez-lozano MA [2]
  • Harper WJ [2]
  • Herrmann E [2]
  • Hoyer MJ [2]
  • Jen A [2]
  • Kakudji E [2]
  • Lee C [2]
  • Lewis SC [2]
  • Li D [2]
  • Lizarrondo J [2]
  • Nightingale NM [2]
  • Overmyer KA [2]
  • Paoli JC [2]
  • Plitzko JM [2]
  • Rose K [2]
  • Swarup S [2]
  • Walther TC [2]
  • Claveras-cabezudo A [1]
  • Hurley JHH [1]
  • Louro JA [1]
  • Murillo MS [1]
  • Ngyuen TN [1]
  • Suarez AV [1]
  • Xiong E [1]

Author by ORCID

  • Harper JW [15]
  • Hurley JH [14]
  • Schulman BA [13]
  • Garcia SN [12]
  • Cook ASI [12]
  • Hummer G [12]
  • Nguyen TN [12]
  • Khuu G [12]
  • Ren X [12]
  • Chen M [12]
  • Cabezudo AC [12]
  • Lazarou M [12]
  • Rao S [12]
  • Yang M [12]
  • Goodall EA [9]
  • Rawson S [9]
  • Walsh Jr Rm [9]
  • Adolf F [9]
  • Du J [9]
  • Hanna J [9]
  • Wilfling F [8]
  • Paulo JA [6]
  • Gygi SP [4]
  • Jiang Y [4]
  • Kraus F [4]
  • Capitanio C [4]
  • He Y [4]
  • Bieber A [2]
  • Lizarrondo J [2]
  • Jen A [2]
  • Anderson BJ [2]
  • Lewis SC [2]
  • Gasparoli FM [2]
  • Farese R [2]
  • Baumeister W [2]
  • Paoli JC [2]
  • Coon JJ [2]
  • Overmyer KA [2]
  • Smith IR [2]
  • Lee C [2]
  • Plitzko JM [2]
  • Gonzalez-lozano MA [2]
  • Rose K [2]
  • Swarup S [2]
  • Herrmann E [2]
  • Brenner J [2]
  • Walther TC [2]
  • Ambaw YA [2]
  • Nightingale NM [2]
  • Li D [2]
  • Kakudji E [2]

Journal

  • BIORXIV [12]
  • SCIENCE [12]
  • NAT STRUCT MOL BIOL [9]
  • ELIFE [6]
  • TO BE PUBLISHED [6]
  • NAT CELL BIOL [2]
  • PNAS [2]
  • SCI ADV [2]

Software

  • CRYOSPARC [13]
  • RELION [12]
  • DYNAMO [11]
  • WARP [11]
  • UCSF CHIMERAX [6]
  • MATLAB [5]
  • IMOD [4]
  • ISOLDE [4]

Microscope

  • TFS KRIOS [26]
  • FEI TITAN KRIOS [11]
  • TFS GLACIOS [4]

Electron Source

  • FIELD EMISSION GUN [41]

Film or detector model

  • GATAN K3 6K X 4K [19]
  • FEI FALCON IV 4K X 4K [13]
  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [4]

External links

  • AlphaFold DB [18]
  • PDBe-Kb [18]
  • UniProt [18]
  • Gene Ontology [13]
  • InterPro [13]
  • PDB [13]
  • Pfam [13]
  • Complex Portal [9]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]